Gadus morhua (Atlantic cod): 115556338
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Entry
115556338 CDS
T10832
Name
(RefSeq) 5-hydroxytryptamine receptor 3C-like isoform X1
KO
K04819
5-hydroxytryptamine receptor 3
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
115556338
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gmh04040
]
115556338
Ion channels [BR:
gmh04040
]
Ligand-gated channels
Serotonin (5-HT3)
115556338
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Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
115556338
NCBI-ProteinID:
XP_030229405
Ensembl:
ENSGMOG00000033498
LinkDB
All DBs
Position
12:8361231..8370770
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AA seq
493 aa
AA seq
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MGNINIDSDYWRDLNITGLEKLQPMISRTTEWHWTLSDRSFWTMTFILFSITQALSLEPL
LNCSEPTNLALLKALSPVFDLRFIRPVININNYTEVYVSFTMYGILGVDEKAQLLTTYIW
QHIVWKNEFISWDPEQCGTEEITLPRTQFWTPDIVINEFVSKNTAPFVPYVHVNSDGKIY
DYSPVRVVSSCRLNIYTFPFDVQNCTFTFNSYTHTNKEIVVNLNRPITQILKNTLAVMST
VGEWQLIDITAHKESDAGFMLDELIFYIGLRRKSTLYVVNLIIPSCSLITVDLFSFLLPP
QSVDRSAFKMTLILGYTVFLLLMNDLLPVTGDTIPLINVFFALCLALMVASLLETILITN
LHSSSSRFAPVPRWVRVVVLQKLGCCVGLPPKPTKEHSTDMYPNAVREEIKAGKTPPMPL
ELEDTTPGELRELGRDLRAIRLQVEKQLSGDQKSEEWIQVASIIDRFLFGLYTLFISVSS
ITMIWIWVDSDRR
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggggaacattaatattgattcagactactggcgtgatctgaatattacagggctcgaa
aaactccagccaatgatttccagaaccaccgagtggcattggacactatctgacaggtcg
ttttggaccatgactttcatcctgttctctatcacacaagctcttagcttggaacctctg
ctgaactgttctgaacccaccaatctagccctgctgaaagcactgtcaccagtctttgat
ttgcgcttcatacggcctgtgatcaacatcaataattacacagaagtctatgtatccttt
accatgtatggcattctgggagtggatgaaaaagctcaactcttgacaacatatatttgg
caacacattgtatggaagaatgagttcatcagctgggatccagagcagtgcggcacagaa
gagataacgttacctagaacccagttttggacaccagatattgtcatcaatgaattcgtt
tctaaaaacacagccccatttgtgccttatgtacatgtcaattctgatggcaagatctat
gactacagtcctgtcagagtggttagctcctgcagactgaacatctacaccttccccttc
gacgtccagaactgcactttcaccttcaactcctacacccacacaaacaaggaaatcgtg
gttaacctcaacaggccgataacacagattttgaagaatacattggctgtgatgagcact
gtaggggagtggcagctaatagatatcactgctcataaagaatcggatgctggatttatg
ctggacgagctcatattttacattggtctgaggcgtaagtccactctctatgtggtcaac
ctgatcatcccaagctgctccttgatcacagtggacctcttcagcttcctgttaccccca
cagagtgtggaccgctcagcctttaagatgaccctcatcttaggctacaccgtcttcctg
ttgcttatgaatgacttgctgccggtcactggcgacaccataccactcataaatgttttc
ttcgccctctgcctggctctgatggttgccagcctgttggagacaatcctcatcaccaac
ctccactcaagttccagtcgttttgctcctgtcccccgctgggtgagagtagtggtcctt
caaaaactgggatgttgtgttggtctgcctccaaagccaacaaaagaacattcaacagat
atgtatccaaatgctgtaagggaggagatcaaagctggtaagactcctccaatgcccctg
gaactggaagacacaaccccaggcgagttgagagagttggggagagacctcagggcgatc
cggctacaggtggaaaagcagctgagtggggaccagaagtctgaggagtggatccaggtg
gcttccatcattgatcgcttcctgtttgggctctacacgctctttatatcagtcagttct
ataactatgatctggatctgggttgattcagacagacgatag
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