KEGG   Gadus morhua (Atlantic cod): 115556382
Entry
115556382         CDS       T10832                                 
Symbol
ncbp2
Name
(RefSeq) nuclear cap-binding protein subunit 2
  KO
K12883  nuclear cap-binding protein subunit 2
Organism
gmh  Gadus morhua (Atlantic cod)
Pathway
gmh03013  Nucleocytoplasmic transport
gmh03015  mRNA surveillance pathway
gmh03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115556382 (ncbp2)
  09122 Translation
   03013 Nucleocytoplasmic transport
    115556382 (ncbp2)
   03015 mRNA surveillance pathway
    115556382 (ncbp2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gmh03019]
    115556382 (ncbp2)
   03041 Spliceosome [BR:gmh03041]
    115556382 (ncbp2)
Messenger RNA biogenesis [BR:gmh03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Cap binding complex
     115556382 (ncbp2)
Spliceosome [BR:gmh03041]
 Common components
  Common spliceosomal components
   Cap binding complex
    115556382 (ncbp2)
SSDB
Motif
Pfam: RRM_1 RRM_10
Other DBs
NCBI-GeneID: 115556382
NCBI-ProteinID: XP_030229470
Ensembl: ENSGMOG00000018657
LinkDB
Position
12:complement(29255361..29257913)
AA seq 163 aa
MSVKLGALHSDSYVDISQYRDQHFKGNRYDQEKLLTQSNTLYVGNLSFYTTEEQVYELFA
KSGDVKRIVIGLDKVKKTACGFCFVEYYTRLDAENAMRFINGTRLDDRIIRTDWDAGFRE
GRQYGRGKSGGQVRDEYRQDYDPARGGYGKIAQTRAPEARSSF
NT seq 492 nt   +upstreamnt  +downstreamnt
atgtctgtcaaactcggcgctttgcacagcgactcctacgtggacatcagccagtacaga
gaccagcattttaagggtaaccgctatgaccaggagaagctgctgacgcagagcaacact
ctgtacgtagggaacctgtccttctacaccacagaagagcaggtgtacgagcttttcgct
aaaagtggagacgtcaagcgcatcgtaattggcctcgataaggtcaagaagactgcctgt
ggtttctgctttgtagagtattacacgcggctagacgcagagaacgccatgcgcttcatc
aacgggacgcggctggacgaccgcatcatccgcactgactgggacgccggcttcagggag
ggccggcagtacggccgcggcaagtcaggaggacaggtgagagacgagtaccggcaggat
tacgacccagccaggggcggctacggtaagatagctcagacgagggctccggaggcccga
agcagcttctag

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