Gadus morhua (Atlantic cod): 115556534
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Entry
115556534 CDS
T10832
Symbol
rpn1
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1
KO
K12666
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 1 (ribophorin I)
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh00510
N-Glycan biosynthesis
gmh00513
Various types of N-glycan biosynthesis
gmh01100
Metabolic pathways
gmh04141
Protein processing in endoplasmic reticulum
Module
gmh_M00072
N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
115556534 (rpn1)
00513 Various types of N-glycan biosynthesis
115556534 (rpn1)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115556534 (rpn1)
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Gene cluster
GFIT
Motif
Pfam:
Ribophorin_I
DNA_repr_REX1B
Motif
Other DBs
NCBI-GeneID:
115556534
NCBI-ProteinID:
XP_030229494
Ensembl:
ENSGMOG00000011297
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Position
13:complement(18794119..18799564)
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AA seq
599 aa
AA seq
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MMPPVGVFTCLIVFAALASETAAEGLVNEDVRRTVDLSTHLAKISSEVLLSNQGDAAVQT
FTLAVEPDLVPHLAYIGASVKGDEEEDGTLELKQTSIHGQSGEFYKVQLPSSLAAGAKLR
VKVDMVFSHVLTPFPSHITQAERQLVVFQGNHYLFSPYPTRSQTTRVRLSSKTVESYTKL
GNPSKSDEVIEYGPFRDVAAFSEDAMKIHYENNSPFLSISSITRTIEVSHWGNIAVEETI
DLRHTGAYLKGPFSRYDYQRQSDSGISSVKSFKTILPASAQDVYYRDEIGNISTSHLQVL
EDSVEVEVRPRFPLFGGWKTHYMIGYNLPSYEYLYTLGDQYALKMRLVDHVFDDQVIDSL
TVKLILPEGARNIHVETPYPIYRLPDQLHYTYLDTFGRPVLVATKSNLVEQHIQDVVVHY
TFNKILMLQEPLLVVGAFYILFFTVIIYVRLDFAITKDPAAEVRMKVASITEQVLTLVNK
RLGLYRHMDEVVNRYKQSRDTGALNSGRKTLEAEHRTFTNDITSLQARLKAEGSDLADKV
GEVQKLDGKVKEMVCRSCQEAERLVAGKVKKEAYIESEKTLGTKRQELVSSIDSLLDAL
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgatgcctcctgtaggagttttcacttgccttattgtgttcgccgcactcgcctccgag
acggccgccgaaggtctggtaaacgaggacgtgcggagaacagtagacctgagcactcat
cttgctaagatttcctcggaggtgctcctgtcgaaccagggcgatgctgcggtgcaaacc
tttacactggcggtggagcccgacctggtgccgcatctcgcttacattggagcttcggta
aaaggtgatgaagaggaagatggaactcttgaactcaagcaaacatcaatacatgggcag
agtggggaattctacaaggtgcagttgccctccagcctggccgcaggtgctaagctgaga
gtgaaggtggacatggtgttcagtcatgtccttacgcctttcccctcgcacatcactcaa
gccgagcgccagttggtggtcttccaggggaaccactacctgttctccccataccccact
cgcagccagaccacccgtgtccgcctgtcctccaagaccgtggagagctacaccaagctg
ggcaacccaagcaagagcgacgaggtcatcgagtatggccccttccgtgacgtcgcagct
ttcagcgaggatgcgatgaagatccactacgagaacaacagcccgttccttagcatcagc
agcatcacacgcaccattgaggtgtcccactggggcaacatcgctgtggaggagaccatc
gacctgagacacaccggagcctacctcaagggccccttctcccgttacgactaccagcgg
cagtccgatagtggcatctcttcggttaaatccttcaagacgatcctccccgcctctgcc
caggatgtgtactaccgggacgagatcggaaacatctccacctcccacctgcaggtgctg
gaggattcggtggaggtggaggtgcgccccaggttccccctgtttggaggctggaagacc
cactacatgattggctacaacctgcccagctacgagtacctctacaccctgggagaccag
tatgcattgaagatgaggctggtggaccacgtgtttgacgaccaggtgatcgattccctc
accgtgaaactcattctgccagagggcgccagaaacatccacgtggaaaccccttacccc
atctaccgcttgcctgaccagctgcactacacctacctggataccttcggccgcccagta
ctggtcgcgacgaagagcaacctggttgagcagcacattcaggacgttgtggtccattac
accttcaataagatcctgatgcttcaggagcctctgctggtcgttggtgccttctacatc
ctcttcttcaccgtcatcatctacgtgcgcctggactttgcaatcaccaaggacccggct
gccgaggtgcgcatgaaggtggcgtccatcacggagcaggtgctgaccctggtcaacaag
cgcctggggctgtaccgccacatggacgaggtggtgaaccgctacaagcagtcacgggac
acgggcgctcttaacagcggccgcaagacgctggaggcggagcaccgcacgttcaccaat
gacatcaccagcctgcaggctcgcctgaaggccgagggatccgacttggcggataaggtg
ggcgaggtgcagaagctggacggcaaggtgaaggagatggtatgccgctcttgccaggag
gcggagcgcctggttgcgggcaaagtgaagaaggaggcctacatcgagagcgagaagacc
cttggcaccaagcggcaggagctggtcagctccatcgacagcctgctggacgccctctaa
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