KEGG   Gadus morhua (Atlantic cod): 115556538
Entry
115556538         CDS       T10832                                 
Name
(RefSeq) ras-related protein rab7
  KO
K07897  Ras-related protein Rab-7A
Organism
gmh  Gadus morhua (Atlantic cod)
Pathway
gmh04137  Mitophagy - animal
gmh04140  Autophagy - animal
gmh04144  Endocytosis
gmh04145  Phagosome
gmh04148  Efferocytosis
gmh05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    115556538
   04145 Phagosome
    115556538
   04140 Autophagy - animal
    115556538
   04137 Mitophagy - animal
    115556538
   04148 Efferocytosis
    115556538
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    115556538
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gmh04131]
    115556538
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gmh04147]
    115556538
   04031 GTP-binding proteins [BR:gmh04031]
    115556538
Membrane trafficking [BR:gmh04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    115556538
Exosome [BR:gmh04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   115556538
  Exosomal proteins of other body fluids (saliva and urine)
   115556538
  Exosomal proteins of colorectal cancer cells
   115556538
  Exosomal proteins of bladder cancer cells
   115556538
GTP-binding proteins [BR:gmh04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    115556538
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA RsgA_GTPase ATP_bind_1 cobW PduV-EutP nSTAND3 Septin AAA_16 AAA_7 NTPase_1 AAA_22 AAA_24 G-alpha AAA_5 ATPase_2 NACHT NB-ARC AAA_14 SRPRB ABC_tran ATP-synt_ab
Other DBs
NCBI-GeneID: 115556538
NCBI-ProteinID: XP_030229498
Ensembl: ENSGMOG00000011308
LinkDB
Position
13:18800168..18804727
AA seq 207 aa
MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ
IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF
VVLGNKIDLENRQVTTKRAQAWCQSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV
ELYNEFPEPIKLDRNERAKPSAETCSC
NT seq 624 nt   +upstreamnt  +downstreamnt
atgacgtctagaaagaaagtcctactgaaagtcatcatccttggagactctggagttggg
aagacctcattgatgaaccaatatgtgaataagaagttcagtaaccagtataaagcaaca
ataggcgcagacttcctgacaaaagaagtcatggtggacgacagacttgttacaatgcag
atctgggacactgccggccaggagaggttccagtcgctaggtgtggccttctaccgtggg
gcagactgctgcgtgcttgtatttgatgtgaccgcacccaatacattcaagaccctagac
agctggagggacgagttcctgatccaggccagcccaagagacccagagaatttccccttt
gtggttcttggcaataagattgatctggaaaacagacaggtgacaaccaaaagagcccag
gcttggtgtcagagtaagaacaacatcccctactttgagacaagtgccaaagaggccatc
aacgtggagcaggctttccagaccattgcaaggaacgctctcaaacaggagactgaagtg
gagttgtacaatgagttccctgagccaataaagctggaccggaacgaaagggccaagcct
tcagcagagacctgcagctgctga

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