Gadus morhua (Atlantic cod): 115556598
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Entry
115556598 CDS
T10832
Name
(RefSeq) DDB1- and CUL4-associated factor 1-like
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
gmh01001
]
115556598
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmh04121
]
115556598
Enzymes [BR:
gmh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
115556598
Protein kinases [BR:
gmh01001
]
Serine/threonine kinases: Other
Other
115556598
Ubiquitin system [BR:
gmh04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
115556598
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR3_2nd
EIF3I
WD40
ANAPC4_WD40
LisH
Beta-prop_WDR19_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
WAPL
WD40_WDHD1_1st
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
115556598
NCBI-ProteinID:
XP_030229570
Ensembl:
ENSGMOG00000000495
LinkDB
All DBs
Position
13:9507422..9522262
Genome browser
AA seq
1517 aa
AA seq
DB search
MASPSAPGEVSGDGSASVDAKAELSALLDQWEKAQQGTTVELVTILTNISELIERETEEY
HKADPDPFDDRHPGRADPDSMLGHILKMLFRNDDFTNALLNGYVMTSRELSLNTAACRLL
QDIMPGLESAVVFQEKEGLVEKLFVWAREAESPLCVYSTGLLARAMANQEIAANYREENA
LLVPLMIQRLRELRTQEAGSDGHDDAPQIPPHQDASSSGAGPVTQEEEEDEGEEEEEEET
PCKRLFVLGSAQKTAGGGGGVPVRLLPDPVFQASPDPGLREAGVRGVGGAGLKRKAGREG
GKKAKQKLNFPSLEAEQRKDPGSQPTNSGSWAEQCSMVIGTNYRLSPLTPAMEQRLILQY
LMPLGDYQELLAVFVQMDCRELLMGYLDLRRTNDVQLTFDALLYLASLLLHKKFAAEFIN
HGGVQRLLEIPRPSMASTGVSLCLYYLAYNQDAMERVCTLPDGVLAGVVSYALWLLESSH
ASGCCHATMFFSISFPFRSVLLLFDRQDGLRRLVNLVSTLQILSAEEQVSVLSDDQVFSS
RQTAKHTCMALRRYFEAHLAVKTEQVKQRSEGGAVVPKQPHYKACTSSREQVVEMMEYLV
ECAPPNLHWDPVEMFLKLSCVPLMLQLISAACDWRTYYGRSDTVRFALDILAIVTVVPKV
QLVLADTVEVLDETHSPVSTMGMSIILGVAEGEVFVNDAEIQKSALQVITNCVCAPDQSL
TTAGGFWPQQLPGPSNRVLTRMWQVVQNNNGIKVLLALLSVKMPITDADLIRSMACKALV
GLSRCSAIRQIISKLPLFSSGHIQQLMKEPVLQDKRSEHVRFCRFAAELTERISGKPLIG
TDVSLARLQRASVVAQSRITFPEKELLMLIRNHLLAKGLQDTASTLLREADLPTAPACPM
ATPASSSVVPLTRTPRLANGIGARAAPGTPVSAAPHGAPPRTPSVSQAPPSSSTASPGLT
HYQGSPLVGRILFSRERPSNLCSVKKPRVLRQKSDHGAFIQSPAMKKPLESHLPSPPTLD
SIITEYLREQHARCPNPVTTCPPFSLFTPHRCPEPKQRRQAPHNFTSRLSSRLLYPKYGG
VDRGCLDRHLIFSRFRPMSVFHEGDGDESGFTCCAFSARERFLMLGTCTGHLKLYNVFSG
EEEASYTCHNSAITHLEPSKDGKLLLTSASWSVPLSALWSMDSVFTPSHSFEDDHYVEFS
KLCQDRVIGTKDQIAHIYDIQTGQKIQTLSDPALANNYKRNCATFNPSDDLVLNDGVMWD
VRSARAIHKFDKFNMNISGVFHPNGLEVIVNTEIWDLRTFHLLHTVPALDQCRLVFNSNA
TIMYGAMLQADEEDNAMDQQMKSPFGSSFRTFDATDYKPIATVDVKRNIFDLCTDSRDCY
LAVIENQDTMSLDTVCRLYEVGRHKLAEEGDDDDDQDDEDQEDDSSDSDDDDDDDDDDDD
EIDIGEAMVGAAERDAGNAEGGDSLSDEVARLLANHSDGDDDSDGEFSLGDSDSSDSSGN
TDTSDLEDELLRTLGED
NT seq
4554 nt
NT seq
+upstream
nt +downstream
nt
atggcttccccctcagcccctggagaagtgtctggggacgggtctgccagcgtggatgcc
aaggcggagctttcggcccttcttgaccaatgggagaaggcgcaacagggcaccactgtt
gagcttgtcactattctcaccaacatctctgagctgatcgagcgcgagacggaggagtac
cacaaggcagaccctgaccccttcgatgaccgccacccggggagggctgacccagactcc
atgctgggacacattctcaagatgctcttcaggaacgacgacttcacaaacgctctgttg
aatggctatgtgatgaccagcagggagctgagcctcaacacggccgcctgccgcctcctc
caggacatcatgccaggcctggagagtgctgtggtcttccaggagaaggaggggctggtg
gagaagctgtttgtctgggcccgggaggcagagtcaccgctctgcgtctacagcacaggt
ctattggccagagccatggccaatcaggagatagctgctaactacagggaggagaacgct
ctgctggtccctctgatgatccagcggctgagggagctccggacccaggaggcggggtcg
gatggtcatgacgatgccccccagatccctccccaccaggacgcctcttcgtcgggggcg
ggccccgtcacccaggaggaggaggaggatgaaggagaggaggaggaggaggaggagacc
ccgtgtaaacgtctctttgtgctgggctccgctcagaagactgcaggaggaggaggtggt
gtgcctgtgcgcctccttcccgaccccgtgttccaggccagtcccgatcctggcctccgt
gaggccggggttaggggggtaggaggtgctggactaaagaggaaggcgggtagagagggc
gggaagaaggccaagcagaagctgaacttcccctcattggaggcagagcagaggaaagac
cccggcagccagccgaccaatagcggctcctgggctgagcagtgctccatggtgattggt
acaaactaccgcctttcacccctgaccccggccatggagcagagactcatcctgcagtac
ctgatgcctctaggagactaccaggagctgctagcggtgttcgtgcagatggactgcagg
gagctgctgatgggttacctagacctcagacggaccaacgatgttcagctcacttttgat
gcactcctgtacctggcctctctgctgctccataagaagtttgcagcagagttcatcaat
catggcggggttcagcgactcctggagatcccccgtccctccatggcctccactggggtc
tcgctctgcctctactacctggcctacaaccaggacgctatggagagggtgtgcaccctg
ccggatggcgtgctggccggcgtggtgagctacgccctgtggctcctggagtcgtcccac
gcctcaggctgctgccacgccaccatgttcttctccatctccttccccttccgctccgtc
ctgctgctgttcgaccggcaggacggcctcagacgcctcgtcaacctggtgagcacactg
cagatcctcagtgctgaagagcaggtgtccgtcctgagtgacgaccaggtgttctctagc
agacagacggccaaacatacctgcatggccctgcgcaggtactttgaggcacacctggct
gtgaagacggagcaggtgaagcagcggtctgaagggggcgctgtggtgcctaaacagccc
cactataaggcatgtacgtccagcagggagcaggtggtggagatgatggagtacctggtg
gagtgtgccccgcccaacctccactgggaccccgtcgagatgttcctcaagctctcctgc
gttcccctcatgctgcagctcatctccgccgcctgcgactggaggacctactacggcagg
agcgacacggtgcgctttgctctggacatcctggccatcgtcaccgtggtccccaaggtc
cagctggtcctggccgacaccgtggaggtcctggatgagacccactccccggtctccacc
atgggtatgagcatcatcctgggtgtggcggagggagaagtgtttgtcaacgacgcagag
atccagaagtcagccctgcaggtgatcacgaactgcgtgtgtgcaccagaccaaagcctg
accactgctggggggttctggccccagcagctccccggcccctccaaccgagtcctgacc
cgcatgtggcaggtggtccagaacaacaacggcatcaaggtccttctggcgctgctgtcg
gtgaagatgcccatcacggatgctgacctgatccgctccatggcctgtaaggcgctggtc
ggtctctcgcgctgctcagccatcagacagatcatcagcaaactgcccctgttcagcagc
gggcacatccaacagctgatgaaggagcccgtgctgcaggacaagcgcagcgagcacgtc
cgcttctgccgcttcgccgccgagctcaccgagcgcatctccggcaagcccctgatcggc
acggacgtgtcgctggcgcgcctgcagagggccagcgtggtcgcccagtcccgcatcacc
ttccccgagaaggagctgctcatgctgatccgaaaccacctgctggccaaggggctccag
gacaccgccagcacgctgctccgggaggccgacctgcccaccgcccccgcctgccccatg
gccacgcctgcctcctccagcgtcgtcccgttgacgaggaccccacgcctcgccaacggg
atcggggcccgggcggccccggggactccggtcagcgccgctccccacggcgctccccct
cggacgccctccgtctctcaagctcctccctcctcctccactgcctcccctggcctcacc
cactaccagggctctcctctggtcggccggatcctcttctcccgtgagcgtccgtccaat
ctgtgctcagtgaagaaacctcgggttctgaggcagaagtccgaccacggggccttcatt
cagagcccggcgatgaagaagcccctggagagccacctgccgtcccccccgaccctggac
agcatcatcacggagtacctgagggagcagcacgcccgctgccccaaccccgtcaccacc
tgcccgcccttctcccttttcaccccccatcgctgccccgagcccaagcagcggcgccag
gccccccacaacttcacctcccgcctgtcctcccgcctcctctaccccaagtacggtgga
gtggaccggggctgcctggacaggcacctcatcttcagcaggttcagacctatgtcggtc
ttccacgagggcgacggcgacgagagcggcttcacctgctgtgcgttctcggcacgtgag
cgcttcctgatgctgggcacgtgcacgggtcacctgaagctctacaacgtcttctccggc
gaggaggaggccagctacacctgccacaactccgccatcacacacctggagcccagcaag
gatggaaagctgttgttgacctctgcgtcctggagtgttccactgtctgctctctggagc
atggatagtgtcttcacccccagtcactccttcgaggacgaccactacgtggagttcagc
aaactgtgtcaggaccgtgtcatcggaaccaaggaccagatcgctcacatttatgacatc
cagacgggccagaagatccagactctgagcgaccccgccctggccaacaactacaagagg
aactgtgcgacctttaacccaagcgacgacctggtcctgaacgacggcgtgatgtgggac
gtgcgctcggcgagggccatccacaagtttgacaaattcaacatgaacatcagtggagtg
tttcaccccaacgggctggaggtgatcgtcaacacggagatctgggacctccggacgttc
cacctgctgcacacagtgcccgccctggaccagtgtaggctggtgttcaacagcaacgcc
accatcatgtacggagccatgctgcaggcggatgaggaagacaatgccatggaccagcag
atgaagagtcccttcggctcctcctttaggaccttcgacgccaccgactacaaacccatt
gccacagtggatgtgaagaggaacatctttgacttgtgcaccgacagccgggactgctac
cttgcagtcatagagaaccaggacacaatgagtttggacacagtgtgccgtctctatgag
gtcggccgacacaaactagctgaggagggagacgacgacgacgatcaggatgacgaggat
caggaggacgactcttcagactcggacgacgatgatgacgacgacgatgatgacgacgac
gagatcgacatcggggaggcgatggtcggcgccgccgagagggacgcggggaacgcagag
ggaggggactctctgtcggacgaggtggcccgtctccttgccaaccacagcgatggtgac
gatgactctgacggagagttcagtctgggggactccgactcctcagacagctctgggaac
acggacacctctgacctggaggacgagctcctgaggacgctgggggaggactga
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integrated database retrieval system
