Gadus morhua (Atlantic cod): 115556827
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Entry
115556827 CDS
T10832
Name
(RefSeq) cadherin-4-like isoform X1
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
115556827
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gmh04515
]
115556827
Cell adhesion molecules [BR:
gmh04515
]
Cadherins
Major cadherins
115556827
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
DUF5527
Stevor
He_PIG
Motif
Other DBs
NCBI-GeneID:
115556827
NCBI-ProteinID:
XP_030230058
Ensembl:
ENSGMOG00000017191
LinkDB
All DBs
Position
13:18114997..18318259
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AA seq
936 aa
AA seq
DB search
MTSESVKMNIGFVALLTCTLLVGSTLGTKLGQPPKPPCKPGFSQNFYTVIVSRDILRGQS
ILKGTTLSSERVKFESCLHNREVVFVSSDPAFSVRSDGSVYVEQEVANLSKPVQFMVTAR
GLRDTRIWETTVKLAVAGHAPSIPLTQVGIEEMLSRAWDSQPRLIKFPRKHLRSSSSNSL
RRQKRDWVIPPINVPENSRGPFPQMLVRIRSDQDVTVGIRYSITGAGADQPPSDIYSIDP
VNGKMFVTKPLDREERASYHLRAHAVDMNGNQVENPIDLYIYVIDMNDNRPEFQNQVYNG
SVDEGSKPGSSVMQVTAGDADDFTTANGMVRYRILSQTPHNPIPNMFTINSETGDIITVA
AGLDREKVSQYTIIVQATDMEGNLNYGLSNTATALISITDINDNPPELTDKTFSGEVPEN
KVNVVVTNLTVVDRDQPHSVNWNAVYRIASGDPSGHFTVRTNPVTNEGMLTVVKPVDFEM
NRAFMLMVVVSNQAHLASGIQSSLSSTAGVTISVQDVNEPPVFPVNPKLIRFEEGVPAGT
TLTVFSAQDPDHFIHQTVRYSKLSDPANWLRINRTNGQISTMALLDRESMYVKNNVYEAT
FLAFDNGKSGAPQASGTGTLQIYLIDVNDNAPVLMPREGQVCERARPASRVNITASDADG
DPNVGPFVFELPSFPASVRRNWTVSRLNGDYAQLRLKIPYLESGFYDIPVFVSDSGNPPL
SNRSVIRIKVCPCDDNGDCSATGAVAAAGLGTGAIIAILICIIILLTMVLIFVMWMKRRE
KERQAKPLLIDPEDDVRDNILKYDEEGGGEEDQDYDLSQLQQPESLDHIINKPAGVRRVD
ERPVIAESQYPVRPSLPHPGDIGDFIIDGLRAADNDPTAPPYDSLLVFDYEGSGSTAGSV
SSLNSSSSGDQDYDYLNDWGPRFKKLADLYGGGEEN
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgacatccgaatctgtgaagatgaatatcggcttcgttgctctattgacgtgcacgtta
cttgttggttcaaccctggggactaagctaggccagccgcccaaacccccctgcaaaccg
ggcttctcccagaacttctacacagtgattgtctcaagggatatactgcgtggccaaagc
attcttaaaggaaccaccctttccagtgagcgtgtgaagtttgagagctgcctgcacaac
cgggaggtggtctttgtgagcagcgacccggccttcagcgtgcgctccgatggctccgtg
tacgtggagcaggaggtggccaacctgtcgaagcccgtccagttcatggtcacggcccgg
gggctccgggacacccggatctgggagaccaccgtgaagctcgcggtggccggccacgcg
ccctcaatacctctgacacaggtcggcattgaagagatgctgtcaagagcatgggactcg
cagcccagactcatcaagttcccccggaagcatctgaggagctcctcctccaacagtctg
cggcgacagaagagagactgggtcattccaccaatcaacgtgcccgaaaactcccgaggg
ccattcccccagatgcttgtcaggatccgctcggaccaggacgtgacggtggggattcgc
tacagcatcaccggggccggggccgaccagcctcccagcgacatctacagcatagacccc
gtcaatgggaagatgttcgtcaccaaacccctggaccgggaggagagggcctcctaccat
cttcgagcgcacgcggtggacatgaacgggaaccaggtggagaaccctatagacctctac
atctacgtcatcgacatgaacgacaacaggcccgagttccagaaccaggtctacaacggc
tccgtggacgagggatcaaaaccaggctcgtcggtcatgcaggtgaccgccggcgacgcg
gacgacttcaccaccgccaacggcatggtgcgctaccgcatcctgtcccagacgccacac
aaccccatccccaacatgttcaccatcaacagtgagacgggcgacatcatcaccgtggcc
gccggactggacagagagaaagtctcccagtacaccatcatagtccaggccacggacatg
gagggcaacctgaactacggcctctccaacacggccaccgccctcatctccatcaccgac
atcaatgacaaccctcctgagctcaccgacaaaacgttctcgggcgaggtccctgagaac
aaggtgaacgtggtggtgaccaacctgacggtggtggaccgcgaccagccgcacagcgtc
aactggaacgccgtgtaccgcatcgccagcggcgacccctccggccacttcaccgtccgc
accaaccccgtcaccaacgagggcatgctcaccgttgtcaagcccgtggactttgagatg
aaccgggccttcatgctgatggtggtggtctccaaccaggcccacctggccagcggcatc
cagtcctccctgtcgtccacggcgggggtcaccatctcggtccaggacgtcaacgagccc
cccgtcttccccgtcaaccccaagctgatccgcttcgaggagggcgtgccggccgggacc
acgctcaccgtgttctcggctcaggaccccgaccacttcatccaccagaccgtcaggtac
tccaagctgtccgaccctgctaactggctgaggatcaacaggaccaacggtcagatcagc
accatggccctgttggaccgggagtccatgtatgtgaagaacaatgtgtacgaggccacc
ttcctggccttcgacaatggtaagtctggcgcgccccaggccagcggtacggggaccctc
cagatctacctgatcgacgtcaacgacaacgccccggtgctgatgccccgcgagggccag
gtgtgcgagcgcgcgcggcccgcctcccgcgtcaacatcacggcctcggacgccgacgga
gaccccaacgtggggcccttcgtcttcgagctgccctccttccccgccagcgtccggcgc
aactggaccgtgtcccggctcaacggcgactacgcccagctgaggctgaagatcccctac
cttgagtccgggttctacgacatccccgtgttcgtgtccgactcggggaacccgccgctc
tccaaccgctcggtgatccgcatcaaggtgtgtccgtgcgacgacaacggagactgcagc
gccaccggggcggtggcggcggccggcctgggcaccggcgccatcatcgccatcctcatc
tgcatcatcatcctcctcaccatggtgctgatcttcgtcatgtggatgaagaggagggag
aaggagcgccaggccaagcccttgctcatcgaccccgaagacgacgttcgagacaacatc
ctcaagtacgacgaggagggaggtggcgaagaggaccaggactatgacctgagccagctg
cagcagcccgagtctctggatcacatcatcaataagccggcgggggtgcgccgggtggat
gagaggcccgtgatcgcagagtcccagtaccccgtccggcccagcctgcctcaccccggg
gacatcggagacttcatcatcgacggtctgcgggcggcggacaacgaccccacggcgccc
ccctacgactccctgctggtgttcgactacgagggcagcggctccaccgccggctccgtc
agctccctcaactcctccagctccggggaccaggactacgactacctcaacgactggggc
ccgcgcttcaagaagctggccgacctctacggcggaggggaggagaactga
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