KEGG   Gadus morhua (Atlantic cod): 115556830
Entry
115556830         CDS       T10832                                 
Symbol
ubap2
Name
(RefSeq) ubiquitin-associated protein 2 isoform X1
  KO
K26545  ubiquitin-associated protein 2
Organism
gmh  Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gmh04121]
    115556830 (ubap2)
   03400 DNA repair and recombination proteins [BR:gmh03400]
    115556830 (ubap2)
Ubiquitin system [BR:gmh04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    115556830 (ubap2)
DNA repair and recombination proteins [BR:gmh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     115556830 (ubap2)
SSDB
Motif
Pfam: UBAP2-Lig UBA_RAD5A GIP1_N UBA_4 Methyltransf_32 UBA_7 UBA_8
Other DBs
NCBI-GeneID: 115556830
NCBI-ProteinID: XP_030230067
Ensembl: ENSGMOG00000008787
LinkDB
Position
13:complement(12155486..12170965)
AA seq 1310 aa
MMSSLGGDKARGPREKTLPTVTHSSQPQKQIQATAEQIRLAQVIYDKNDSDSECKVNQLM
EVTGKNQDECMIALHDCNEDVNRAINFLLESTSDTTSWETVGKKKPLVKEGPSESKENKE
NREKKGDKEANKGRSASSRRGKGASRSRPGTAPPTETVTSHPVSLPHPFVMDSPVCVSVY
TAARPEENGVEVMPVERGSERGRRGRGGRGGLIGAGGRGRGRAPPGSRFSAQGMGTFNPA
DYTSDSRTRTMDSEVWDTGANGTNPDGTAWRNTLEDWAAEDWSEDVSLSETKVFTSSCAP
AAENHITPGQSLDLATLLQKPVGGGREAPPSSSSSSSQSLVFTNSHHHHHQPQQPQLPLS
RNATGSTSYAHVALSSVLGAGFGDLGQSKRSQPSAGAQILEQLKGPGLGPLPSSQATPSV
GTQGGRLPGLGVPVPPPVSSSWDLKVSEPGASSQFSREFGMQPEPSLVLSQLVQRHAGPS
LPLARQPSPPTQRLQQAAPAAPSPGLQAGQGGPLLAAGSAKSPAPSAGLDPPGSGTPHQQ
QRAQLKGQKRRIPPTSKIPSTAVEMPGSADIPGLNLQFGALDFGSESAIPDFGAVENCVV
GASRESTPGPVAAPTAPGPQSQSSLYSTPLSESLGLPLSVPLPLPISSSEPVYHSPSITL
PNLSASSLGTASSANPHAAAAASSAASALSSSVAVQSTASPFCSVGGSYDAPLSVHSRLA
FTQSKEASGPVMNGLNGMRTSVALDTSSVSSTPKPDSPSLSVSSHSGQGGPSHHPSVMPN
HNAALASLAQDMPTVSQLSSLNSHASSHSSVSAAGSSALTYTSGDSSSMSSLAPSSGSYT
SSQIPGPSLHSVHHHHNNINISSSSSSISHLANMANMGGGMSSAMANAGALHSALGLSSN
GIGAASNLAAGRTAPLLSSSSGKAPPNLSQGVPPLLPNQYIMGPGGLLPAYPQIYGYEDL
HMLQSRLPMTCPRPWPQPSLQDYYGITFPGPAALSGRDGSLANNPYSGEVTKFGRNDSTS
PAPPTSLSAPQPPQGQSQGQSQGQPQQPQAQGQPQHHGNQQAFLPPGYSYTGLPYYPGVP
SAVPSAAAFQYGPTMFVPPGAQGPASGKQHGMGLGLGNPSASPFQQQSQQQPSGYGQHTF
SSGYEELTAGPAGVDYSKGYSNSSQAQAKSAASGPGKGVSVTSSNSGVPDISGSVYNKSQ
PYNGAKCVLFPHPGQAFDKQGFHAGTPPPFSLPSALGGPGPLNPGGAPGGYAPAPFLHIL
PHQQPHSQLLHHHLAQDGQGGPSQRGQSSSMQQKSQVNKSSYGSSPYWAN
NT seq 3933 nt   +upstreamnt  +downstreamnt
atgatgagctcgctgggcggcgacaaggcccggggccctcgggagaagacgctgcccacc
gtcacacactcctcccaaccacagaaacagatacaggctactgcagagcaaatccgcctt
gcccaggtgatctatgacaagaacgactctgactctgagtgcaaagtcaaccagctcatg
gaggtcacggggaagaaccaggatgagtgcatgatagcgctccacgattgcaacgaggac
gtgaacagagccatcaacttcctcctggagagtacatccgacacgacctcatgggagacc
gtagggaagaagaagcccctcgttaaggagggaccgtccgagagcaaggagaacaaggag
aaccgggagaagaaaggagacaaggaagccaacaagggtcgcagtgcctccagccgcagg
ggcaagggggctagtcgcagccgaccgggtacagcccccccgacagagacagtcacatcc
caccctgtgtcgctaccccatcccttcgtgatggactcacctgtgtgtgtgtctgtgtat
acagccgcacgcccagaggagaatggggttgaggtgatgcccgtggaaaggggctcggag
cgaggccggaggggcaggggaggtagaggggggttgattggagccggaggtcgaggcagg
ggcagagcgccgccagggagccggttctcagcccagggaatggggaccttcaacccggcg
gactacacctcagattcccgcacgcggaccatggactcagaggtgtgggacacgggggcc
aacggcaccaacccagatggaacagcctggaggaatacactggaagactgggctgctgag
gactggagcgaggatgtcagtctctccgagaccaaagtgttcacctcctcgtgtgcgcct
gctgctgagaaccacatcacacctggacaaagcctggacctggccacgctgctgcagaag
cctgtgggtggaggtagggaggctcccccttcctcttcctcctccagctctcagagcctg
gtctttaccaactcccaccaccaccaccatcaaccgcagcagccccagcttcccctcagc
cgaaacgccactggcagcacaagctatgcacacgttgccctgtcgtccgtgcttggagct
ggcttcggtgacctgggacagtccaaacggagccagccaagcgcaggagctcagatactg
gagcagctaaagggtcccggcctgggtccgctgccatcctcccaggccacgccctctgtc
ggcacccaagggggtcgtctgcccggccttggagtcccagtacctccgccagtctcctcc
agctgggacctgaaggtgtcagagcccggtgcctcctcgcagttcagccgggagtttggt
atgcagccagagccctccctagttctgagccagctggtccagaggcacgcgggaccctcg
ctgcccctggcgcgccaacccagccccccgacgcagcggctgcagcaggccgcccccgcc
gccccgtctcccgggctccaggcgggccagggaggccccctgctggctgctggtagtgcc
aagtctcctgcgcccagtgcagggctggaccctccgggcagcggcacgccgcaccagcaa
caacgggcgcaactcaagggccagaagcgaaggataccccccacgtcaaagatcccctcc
acggcggtagagatgccaggctccgcagacattcccgggctcaacctccagttcggagcg
ctggacttcggctccgagtcggccatcccagacttcggcgccgtggagaactgtgtcgtt
ggcgcctcgcgggaatcaaccccgggccccgtggccgctccaaccgcacctggaccccag
agccagtccagcctgtactccacacccctcagtgagtccctgggcctcccgctctcggtg
ccgctgccactgcccatctcctcgtcggagcccgtctaccactcgccctccatcacgctg
cccaacctatccgcctcctccctgggcaccgccagctcagccaatcctcacgctgccgct
gccgccagctccgccgcctccgcgctgtcgtcctccgttgcggtccagtccaccgcctcc
cccttctgctccgtcggggggagttacgacgcacctttgtcggtccactcgcggctggcc
ttcacccagagcaaagaggcctctgggccggtcatgaatggcttgaacggcatgaggacg
tcagttgctttagacacatcatcagtgtcatccacaccaaagcctgactctccctctctg
agcgtcagcagccacagtgggcaaggcggcccctcccaccacccctcggtgatgcccaat
cacaatgctgcactggccagcctggcccaggacatgcccaccgtcagccagctcagctct
ctcaacagccatgccagcagtcactcttcagtctcggcagcgggctccagtgctctcact
tacaccagtggggacagcagtagcatgagctccctggcgccctcgtctggctcctacacg
tcgtcgcagatccccggcccttcgctccactcggtgcaccaccaccacaacaacatcaac
atcagcagcagcagcagtagcatcagccacctggctaacatggccaacatgggtggcggc
atgagcagcgccatggctaacgcgggcgcgctgcactcggctctggggctcagctccaac
ggcatcggcgccgcctccaacctggcggcgggccggaccgccccgctgctctcctcgtcc
agcggcaaagcccctcccaacctgtcccagggcgtgcctccactgctgcccaaccagtac
ataatgggccccggaggactgcttccagcatacccacagatctatggctacgaggacctc
cacatgctacagtccagactacccatgacgtgtccccgtccgtggccgcagccctccttg
caggactactacggcatcacattccctgggcctgcagctctctcaggcagagacgggagt
ctagccaacaacccatactcaggtgaagtcacaaagttcggaaggaacgactccacctcg
ccggcccccccgaccagcctgtcggccccccagcccccccagggtcagagccagggccag
agccagggccagcctcagcagccccaggcccagggccagccacagcaccacgggaaccag
caggcctttctacccccgggctacagctacaccggcctgccctactaccccggtgtgccc
agcgccgtgcccagcgccgcagccttccagtacggccccaccatgttcgtccctccggga
gcccaggggccggcctccggcaagcagcacggcatgggcctggggctgggcaacccctcg
gccagccccttccagcagcagagccagcagcagcccagcggctacggccagcacaccttc
agctcagggtacgaggagctgacggccgggccagccggtgtggactacagcaaaggctac
agcaactcctcccaggcccaggccaagtctgctgctagcggccctgggaaaggcgtctcc
gtgacgtccagtaactcgggagtgccagacatcagtggaagtgtttacaataagagccag
ccctacaatggagccaaatgtgtcctgtttccacaccccggccaggcctttgacaagcag
ggtttccacgccgggaccccgcctcccttcagcctgccttcagcgttggggggcccgggg
cctctgaaccctggtggggcccctggaggctacgctccggcccccttccttcacatcctg
cctcaccagcaaccccactcccagctgctacaccatcacctggctcaggacggacagggt
ggtcctagccagcgcggccagtccagtagcatgcagcagaagagccaggtcaacaagtcc
agctacggcagctccccctactgggccaactga

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