Gadus morhua (Atlantic cod): 115556840
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Entry
115556840 CDS
T10832
Symbol
rpn2
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 isoform X1
KO
K12667
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 2 (ribophorin II)
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh00510
N-Glycan biosynthesis
gmh00513
Various types of N-glycan biosynthesis
gmh01100
Metabolic pathways
gmh04141
Protein processing in endoplasmic reticulum
Module
gmh_M00072
N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
115556840 (rpn2)
00513 Various types of N-glycan biosynthesis
115556840 (rpn2)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115556840 (rpn2)
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Gene cluster
GFIT
Motif
Pfam:
Ribophorin_II
Ribophorin_II_3rd
Ribophorin_II_C
Ribophorin_II_2nd
Mfa_like_2
Ig-CFAP74_4th
Motif
Other DBs
NCBI-GeneID:
115556840
NCBI-ProteinID:
XP_030230087
Ensembl:
ENSGMOG00000014382
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Position
13:complement(21558553..21568306)
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AA seq
642 aa
AA seq
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MAQTSWLRVFLFGFALGAQALTPSHYLSLSDVARLQTFLGQHFTDLQSAYYSIVGLAKLG
AGVADQDEACQFLKAQLDPTSVDSLFYAAVASQALAGCEIPLSNETRDILLAAVSEDSTV
AQIHHAVGALTALGLPLASQEVVTALRVRINKEENVVAITLALQTAARLSQQAELGGFVE
EIEDLTARLDDLGGLYLQFEEGLEATADFVVAAYGLSDHLDVEPPLKEEQVIQLVNSIFS
KKSWDSMSEAFSVAGAAVALSSNRFHVPVVVRAEGPATVSHSKPTLQLLITDVLSQPMGA
ASVLVESATALATKSVVLSQTPFTLRDGLFELNFMSSQPASGYYQFTVAVTGDSRLVANH
VELKVKVSTEVAITNMDLSIVDKDQSIGTKTSRVEFPSKSKDSFTADSHQNFAMAFQLVD
VNTGVELTPHQTFVRLLNQKTGQEVVFVAEPDSKNLYKFELDMVERKSEFDSMSGTYSLH
LMVGDATLENPILWNVADVILKFLDEEAPAVIQPKTLYIPKPEIQHLFREPEKKPPTVVS
NAFTALILSPFLLLLILWMKLGANISNFTMSPSAVLFHIGHAAMLGLMYVYWTHLDMFQT
LKYLAIIGSLTFLAGNRMLAQKAVKRIAAEQSSRLAKYRSLR
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggcccaaactagctggctacgggtgttcctcttcggctttgctctcggagcacaggca
ctcacaccgtcccattacctctccctgtctgatgtggcgaggctccagaccttcctcggc
cagcacttcacggacctccagtccgcatactactctatcgtcggtctggccaagctcgga
gcgggtgttgccgaccaagatgaagcatgccagttccttaaggcccagctcgatccaaca
agtgtggactccctcttctatgctgcagtggccagtcaagccctagcaggatgtgagatc
ccattgtccaatgaaaccagagatattctcctggcggctgtgagcgaggactcgactgtg
gcccagatccaccatgctgtgggagccctcaccgctctgggccttccactggcgtcccag
gaggtggttaccgccctccgggtgcgcatcaacaaggaggagaatgttgtggccattacc
ttggccctgcagactgctgcccgcctctcccaacaggctgaactgggggggtttgtggaa
gaaatcgaagatctgacggctcgtttggacgatctggggggcctttacctgcagttcgag
gaggggctcgaggccactgccgactttgtggtggccgcttacggcttgtccgaccacttg
gacgtggagcctcccttgaaagaggagcaggtcatccagctggtgaactccatcttcagt
aagaagtcctgggactccatgtcggaggccttcagcgtggcgggtgccgccgtcgccctc
tccagcaaccgcttccatgtgccggtggttgtgagagccgagggcccggccaccgtgtcc
cacagcaaacccaccctgcagctcctgatcaccgacgtcctgtctcagcccatgggggct
gccagcgtgctggtggagagcgccactgccctggccaccaagagcgtcgtcctcagccag
accccgttcacactcagagatggtctatttgagctgaacttcatgtccagccagccggca
agtggctactaccagttcaccgttgctgtgaccggagacagccgactggtagccaatcac
gttgagcttaaagtgaaggtgtctacagaggtggccattacaaacatggacctgtccatt
gtggataaggaccagagcattggcacaaagaccagcagggtggaattcccttctaagtcc
aaggactccttcacggccgacagccaccagaacttcgccatggccttccagctggttgat
gtgaacactggggtggaacttacccctcatcagactttcgtccgactgctgaaccagaag
acggggcaggaggtcgtgtttgtggcagagccggacagcaagaacctctacaagtttgag
ttggacatggttgagcgcaagtctgagtttgactccatgtcgggcacctactccctgcac
ctcatggtgggagacgccactctggagaacccaattctgtggaacgtggccgatgttatc
ctgaagttcctggacgaggaggccccggctgtcatccagcccaagaccctctacatcccc
aagccagagatccagcacctgttcagggagcctgagaagaagcctcccactgtggtctcc
aatgccttcacagccctcatcctctctcccttcctcctgctgcttattctgtggatgaag
ctgggggccaacatctccaacttcaccatgtcccccagcgccgtgctcttccacatcgga
cacgcagccatgctgggccttatgtacgtgtactggacccacctcgacatgttccagacc
ctcaagtacctggccatcatcggcagtctcaccttcctcgcaggcaaccgaatgctggcc
cagaaagcagtaaagaggattgccgctgagcaaagtagtagattggcaaagtataggagc
cttcgttaa
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