KEGG   Gadus morhua (Atlantic cod): 115556916
Entry
115556916         CDS       T10832                                 
Symbol
tmf1
Name
(RefSeq) TATA element modulatory factor
  KO
K20286  TATA element modulatory factor
Organism
gmh  Gadus morhua (Atlantic cod)
Brite
Membrane trafficking [BR:gmh04131]
 Endosome - Golgi transport
  Rab GTPases and associated proteins
   Rab associated proteins
    115556916 (tmf1)
SSDB
Motif
Pfam: TMF_TATA_bd TMF_DNA_bd
Other DBs
NCBI-GeneID: 115556916
NCBI-ProteinID: XP_030230193
Ensembl: ENSGMOG00000019270
LinkDB
Position
13:complement(18503743..18521831)
AA seq 1171 aa
MSWFNASHLSTFAKQALTTAQKSIDRVLDIQEEGQWGDTVVMPYDDLPGKTPLGGGWGTS
QWESALEEEEEEEPPLSSEAITTPVTRTVVDETDNFFSTFLPAQDVTNTQIVSSAPQTKR
REQEKAKKSKEPVILNEVESFESEFSHLALDDLDVSGSLPDEPEPLSGAPEEHSSMLQPA
ILVASQEDPPFDSFIGRRTSNDGMVENKVALESVDNQTEEMLIHLGPLAEDPDVTDSPEA
SDEPESISPSDSSPSTPPKPIQLETKDGKVEDRQTDTPSPPVSAFSSGTSTTSDIEVLDH
ESVLSESSASSRQETAEVKAGLHLMQGSFQLLSASACGELLRNEDYAKLTESCGSSSDAF
ERIDSFSMQSLDSRSVSEVNSDDDIPGSRTLASVTAGSEPIAPTASVVFQSQDEAPREEQ
VGKEEEEEEKEALQQEEEEEEEEEEGLTETMRDQSLDEMEESGRSATPVNCEQPEDLTEE
DDQTGLMMSSTTSELEENPAQPITKEMRSVSTCQILELQKVIDELSSRLEKRESQLLTVS
TDKVRLEEKCDNLRDEVVALKEETSTVQSLKEEFTQRIADTERKAQVACKERDIAKKEIK
SMREVLTTRLNAEAMEIIKEKEEQIRGLLEEGEKLSKQQLQHCNIIKKLRVKEKDSDGRV
SKQSKRLRELEEELRQLQQVLDGKEEVEKQHRENIKKLNSVVERQEKEATRLQMDSEELQ
EKNRSLQAALDSSYKELAELHKAKASRDSEAQEVALSRETQAKEQLSVTLDKAQEEARLQ
QEALGNQVSDLRVALQRAEQQQARKEDYLREEISQLQQRLQEAESRNQELSQGMTSATRP
LLRQIENLQASLGGQTASWEKLEKNISDRLSDAQAQLAVAVEKERAATEEGMAVRSQLAS
LESQNSLLRKEKGRYVVELGTEKNQRERLEEDSSREHVELENLRGEHSRLLDEAKKEKLL
LTNQLEMEKMKVEQEKKKCYLAQEALKEKERKAMAHSVGEPPASSTPSLSRSSSISGTDT
AGLYASTFSQDDSMDHSLGVMPMSMSLSGTNLYEAARLSGGSSIMENLQSQLKLREGEIA
QLQLEISSLERSRSVMAEEVVRLTNQNDDMDLLVKDIPRLQVQLKDLEQRHNTILQMYGE
KAEEAQELRMDLDDVKNMYKTQIDELLKNQK
NT seq 3516 nt   +upstreamnt  +downstreamnt
atgagctggttcaacgcgtcccacttgtctaccttcgccaaacaagcgttgacaacagcc
cagaagtccatcgatagagtgctggatattcaagaagaaggccaatggggtgacactgtc
gtcatgccctatgatgatttacctggaaagacaccgttgggtggaggatgggggaccagt
cagtgggagtccgccctagaagaagaggaggaggaagagccccctctatcatctgaggcc
atcactacacctgttacccgcaccgttgtagatgagacggataacttcttcagtaccttt
ctgcctgcacaggatgttactaacacccagatcgtgtcttcagcccctcagaccaaaaga
cgagagcaggagaaggctaagaagagtaaagaacctgtgatcctaaatgaagtggagtcc
tttgagtccgaattttctcatttggcccttgacgatctggatgtttctggaagcctacct
gatgagcctgagccgttatctggggcacctgaagaacactccagtatgcttcaaccagct
attcttgtggcgtctcaggaggatcctccctttgattctttcatagggaggcgtacatcc
aacgacggtatggtcgaaaataaagttgctttagagtctgtggataatcaaacagaagag
atgctgatccacttgggacccctcgccgaagaccctgacgtcaccgactcgcctgaggct
tcagatgaacccgagagcatatccccttcggactcgtcaccaagcacgccccccaagccg
atacaactggaaactaaagacggcaaggtggaagaccgccagaccgacaccccctcccct
ccggtcagcgctttctcctcgggcacctcgaccacaagtgacattgaggtgctggaccac
gagagtgtgttgagtgagagctcagccagctccagacaggagacggcagaggtgaaggcc
ggccttcacttgatgcagggctctttccagctgctctcggcctcggcgtgtggagagctc
ctccgcaacgaggattacgccaagctcactgaaagctgcggctcgtcctcggacgctttt
gagcgcatcgactcgttcagcatgcagtcgctggacagccgcagcgtcagcgaggtcaac
tctgacgacgacattccaggaagtcgaacgctggcttctgtcaccgccggctcggagcct
attgcccctacagcatctgtggtttttcagagtcaggatgaggctcccagagaagagcag
gtggggaaggaagaagaagaagaggaaaaggaggcgctgcagcaggaggaggaggaagag
gaagaagaagaagaagggctcactgagacgatgagggaccagtctttggatgagatggag
gaaagtgggcggagtgcaacaccagttaattgtgaacagcctgaagatttgacggaagaa
gatgaccaaactggtctcatgatgtcaagtaccacctcagagctggaggaaaaccccgct
cagccaatcacgaaggagatgagaagcgtctctacctgtcagattctggagttgcaaaag
gtgattgatgagctctccagtcgtctggagaagagggagtcccagctgctgacagtgagc
acggacaaggtccgcctggaggagaagtgtgacaacctcagagatgaagtggttgccctg
aaggaggagacctccacagtccagtctctgaaggaggagttcacccagcgcatagcagac
actgagaggaaggcccaggtagcctgcaaagagagggacatcgccaaaaaggagatcaag
agcatgcgggaggtgttgaccaccagactgaacgcggaggcgatggagatcatcaaagag
aaggaggagcagatacgaggcctgcttgaggaaggtgagaagttgtccaagcagcagctg
cagcactgcaacatcatcaagaagctgcgtgtgaaggagaaggacagcgacggcagggtc
tccaagcagagcaagaggctcagagaactggaggaggagctccgacagctccagcaggtt
ctggatgggaaggaggaggtggagaagcagcacagggagaacatcaagaagctgaacagc
gtggtggagcgccaggagaaggaggccactcgcctgcagatggactctgaggagttgcag
gagaagaaccgcagccttcaggccgccttggacagctcttacaaggagctagcggagctc
cataaggccaaggccagcagagacagtgaagcccaggaggtggctctgagcagggagacc
caggccaaggagcagctgagtgtcaccctggataaggcccaggaggaggcgcggttacaa
caggaggccctgggcaatcaggtgtccgacctgagggtggccttgcagcgggcggagcag
cagcaggcgaggaaggaggactacctgagggaagagatcagccagctgcagcagaggctt
caggaagccgagagcaggaaccaggagctgagtcagggcatgacctcagccacgcggccc
ctgctcagacagatcgagaacctgcaggcgtcgctggggggccagacggcctcatgggag
aagctcgagaagaacatctcggaccgactctcggacgcccaggcacagttggctgttgcc
gtggagaaggagcgcgccgccacagaggaggggatggccgtacgctcccagctggcctcc
ctggagtcccagaactctctgctccgcaaggaaaaggggcgctacgtggtggagctgggc
acggagaagaaccagagggagagactggaggaggacagcagcagagagcatgttgagctg
gaaaacctgcgtggagagcacagccgcttgctagatgaggccaagaaagaaaagctgcta
ctgaccaatcagctggagatggagaagatgaaggtggagcaagaaaagaagaaatgctac
cttgcacaggaggccctcaaggagaaggagagaaaggccatggcccactctgtaggggag
cccccagcctcctccaccccctccctgtcccgctccagctccatcagtgggaccgacact
gccggtctgtacgcctcaaccttttcccaggatgactctatggaccactcgctgggagtc
atgcccatgtccatgtccctcagtgggaccaacctgtacgaggcggccaggctctctgga
ggctccagcatcatggagaacctgcagtcgcagctcaaactgagagaaggagagattgcg
cagctacagttggagatctccagcctggagaggagtcgctccgtcatggcggaggaagtg
gtccgcctcaccaaccagaacgatgacatggacctcctggtgaaggacatccccaggctc
caggtccagctcaaggatctggagcagagacacaacaccatcctccagatgtacggggag
aaggccgaggaggctcaggagctgaggatggacctggacgacgtaaagaacatgtacaaa
acccagatcgacgagctgctgaagaaccagaaatag

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