Gadus morhua (Atlantic cod): 115556916
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Entry
115556916 CDS
T10832
Symbol
tmf1
Name
(RefSeq) TATA element modulatory factor
KO
K20286
TATA element modulatory factor
Organism
gmh Gadus morhua (Atlantic cod)
Brite
Membrane trafficking [BR:
gmh04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
115556916 (tmf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
Motif
Other DBs
NCBI-GeneID:
115556916
NCBI-ProteinID:
XP_030230193
Ensembl:
ENSGMOG00000019270
LinkDB
All DBs
Position
13:complement(18503743..18521831)
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AA seq
1171 aa
AA seq
DB search
MSWFNASHLSTFAKQALTTAQKSIDRVLDIQEEGQWGDTVVMPYDDLPGKTPLGGGWGTS
QWESALEEEEEEEPPLSSEAITTPVTRTVVDETDNFFSTFLPAQDVTNTQIVSSAPQTKR
REQEKAKKSKEPVILNEVESFESEFSHLALDDLDVSGSLPDEPEPLSGAPEEHSSMLQPA
ILVASQEDPPFDSFIGRRTSNDGMVENKVALESVDNQTEEMLIHLGPLAEDPDVTDSPEA
SDEPESISPSDSSPSTPPKPIQLETKDGKVEDRQTDTPSPPVSAFSSGTSTTSDIEVLDH
ESVLSESSASSRQETAEVKAGLHLMQGSFQLLSASACGELLRNEDYAKLTESCGSSSDAF
ERIDSFSMQSLDSRSVSEVNSDDDIPGSRTLASVTAGSEPIAPTASVVFQSQDEAPREEQ
VGKEEEEEEKEALQQEEEEEEEEEEGLTETMRDQSLDEMEESGRSATPVNCEQPEDLTEE
DDQTGLMMSSTTSELEENPAQPITKEMRSVSTCQILELQKVIDELSSRLEKRESQLLTVS
TDKVRLEEKCDNLRDEVVALKEETSTVQSLKEEFTQRIADTERKAQVACKERDIAKKEIK
SMREVLTTRLNAEAMEIIKEKEEQIRGLLEEGEKLSKQQLQHCNIIKKLRVKEKDSDGRV
SKQSKRLRELEEELRQLQQVLDGKEEVEKQHRENIKKLNSVVERQEKEATRLQMDSEELQ
EKNRSLQAALDSSYKELAELHKAKASRDSEAQEVALSRETQAKEQLSVTLDKAQEEARLQ
QEALGNQVSDLRVALQRAEQQQARKEDYLREEISQLQQRLQEAESRNQELSQGMTSATRP
LLRQIENLQASLGGQTASWEKLEKNISDRLSDAQAQLAVAVEKERAATEEGMAVRSQLAS
LESQNSLLRKEKGRYVVELGTEKNQRERLEEDSSREHVELENLRGEHSRLLDEAKKEKLL
LTNQLEMEKMKVEQEKKKCYLAQEALKEKERKAMAHSVGEPPASSTPSLSRSSSISGTDT
AGLYASTFSQDDSMDHSLGVMPMSMSLSGTNLYEAARLSGGSSIMENLQSQLKLREGEIA
QLQLEISSLERSRSVMAEEVVRLTNQNDDMDLLVKDIPRLQVQLKDLEQRHNTILQMYGE
KAEEAQELRMDLDDVKNMYKTQIDELLKNQK
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgagctggttcaacgcgtcccacttgtctaccttcgccaaacaagcgttgacaacagcc
cagaagtccatcgatagagtgctggatattcaagaagaaggccaatggggtgacactgtc
gtcatgccctatgatgatttacctggaaagacaccgttgggtggaggatgggggaccagt
cagtgggagtccgccctagaagaagaggaggaggaagagccccctctatcatctgaggcc
atcactacacctgttacccgcaccgttgtagatgagacggataacttcttcagtaccttt
ctgcctgcacaggatgttactaacacccagatcgtgtcttcagcccctcagaccaaaaga
cgagagcaggagaaggctaagaagagtaaagaacctgtgatcctaaatgaagtggagtcc
tttgagtccgaattttctcatttggcccttgacgatctggatgtttctggaagcctacct
gatgagcctgagccgttatctggggcacctgaagaacactccagtatgcttcaaccagct
attcttgtggcgtctcaggaggatcctccctttgattctttcatagggaggcgtacatcc
aacgacggtatggtcgaaaataaagttgctttagagtctgtggataatcaaacagaagag
atgctgatccacttgggacccctcgccgaagaccctgacgtcaccgactcgcctgaggct
tcagatgaacccgagagcatatccccttcggactcgtcaccaagcacgccccccaagccg
atacaactggaaactaaagacggcaaggtggaagaccgccagaccgacaccccctcccct
ccggtcagcgctttctcctcgggcacctcgaccacaagtgacattgaggtgctggaccac
gagagtgtgttgagtgagagctcagccagctccagacaggagacggcagaggtgaaggcc
ggccttcacttgatgcagggctctttccagctgctctcggcctcggcgtgtggagagctc
ctccgcaacgaggattacgccaagctcactgaaagctgcggctcgtcctcggacgctttt
gagcgcatcgactcgttcagcatgcagtcgctggacagccgcagcgtcagcgaggtcaac
tctgacgacgacattccaggaagtcgaacgctggcttctgtcaccgccggctcggagcct
attgcccctacagcatctgtggtttttcagagtcaggatgaggctcccagagaagagcag
gtggggaaggaagaagaagaagaggaaaaggaggcgctgcagcaggaggaggaggaagag
gaagaagaagaagaagggctcactgagacgatgagggaccagtctttggatgagatggag
gaaagtgggcggagtgcaacaccagttaattgtgaacagcctgaagatttgacggaagaa
gatgaccaaactggtctcatgatgtcaagtaccacctcagagctggaggaaaaccccgct
cagccaatcacgaaggagatgagaagcgtctctacctgtcagattctggagttgcaaaag
gtgattgatgagctctccagtcgtctggagaagagggagtcccagctgctgacagtgagc
acggacaaggtccgcctggaggagaagtgtgacaacctcagagatgaagtggttgccctg
aaggaggagacctccacagtccagtctctgaaggaggagttcacccagcgcatagcagac
actgagaggaaggcccaggtagcctgcaaagagagggacatcgccaaaaaggagatcaag
agcatgcgggaggtgttgaccaccagactgaacgcggaggcgatggagatcatcaaagag
aaggaggagcagatacgaggcctgcttgaggaaggtgagaagttgtccaagcagcagctg
cagcactgcaacatcatcaagaagctgcgtgtgaaggagaaggacagcgacggcagggtc
tccaagcagagcaagaggctcagagaactggaggaggagctccgacagctccagcaggtt
ctggatgggaaggaggaggtggagaagcagcacagggagaacatcaagaagctgaacagc
gtggtggagcgccaggagaaggaggccactcgcctgcagatggactctgaggagttgcag
gagaagaaccgcagccttcaggccgccttggacagctcttacaaggagctagcggagctc
cataaggccaaggccagcagagacagtgaagcccaggaggtggctctgagcagggagacc
caggccaaggagcagctgagtgtcaccctggataaggcccaggaggaggcgcggttacaa
caggaggccctgggcaatcaggtgtccgacctgagggtggccttgcagcgggcggagcag
cagcaggcgaggaaggaggactacctgagggaagagatcagccagctgcagcagaggctt
caggaagccgagagcaggaaccaggagctgagtcagggcatgacctcagccacgcggccc
ctgctcagacagatcgagaacctgcaggcgtcgctggggggccagacggcctcatgggag
aagctcgagaagaacatctcggaccgactctcggacgcccaggcacagttggctgttgcc
gtggagaaggagcgcgccgccacagaggaggggatggccgtacgctcccagctggcctcc
ctggagtcccagaactctctgctccgcaaggaaaaggggcgctacgtggtggagctgggc
acggagaagaaccagagggagagactggaggaggacagcagcagagagcatgttgagctg
gaaaacctgcgtggagagcacagccgcttgctagatgaggccaagaaagaaaagctgcta
ctgaccaatcagctggagatggagaagatgaaggtggagcaagaaaagaagaaatgctac
cttgcacaggaggccctcaaggagaaggagagaaaggccatggcccactctgtaggggag
cccccagcctcctccaccccctccctgtcccgctccagctccatcagtgggaccgacact
gccggtctgtacgcctcaaccttttcccaggatgactctatggaccactcgctgggagtc
atgcccatgtccatgtccctcagtgggaccaacctgtacgaggcggccaggctctctgga
ggctccagcatcatggagaacctgcagtcgcagctcaaactgagagaaggagagattgcg
cagctacagttggagatctccagcctggagaggagtcgctccgtcatggcggaggaagtg
gtccgcctcaccaaccagaacgatgacatggacctcctggtgaaggacatccccaggctc
caggtccagctcaaggatctggagcagagacacaacaccatcctccagatgtacggggag
aaggccgaggaggctcaggagctgaggatggacctggacgacgtaaagaacatgtacaaa
acccagatcgacgagctgctgaagaaccagaaatag
DBGET
integrated database retrieval system