Gadus morhua (Atlantic cod): 115556935
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Entry
115556935 CDS
T10832
Symbol
nisch
Name
(RefSeq) nischarin isoform X1
KO
K24095
nischarin
Organism
gmh Gadus morhua (Atlantic cod)
Brite
Domain-containing proteins not elsewhere classified [BR:
gmh04990
]
Phox homology (PX) domain-containing proteins
Other PX domain-containing proteins
115556935 (nisch)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
115556935
NCBI-ProteinID:
XP_030230222
Ensembl:
ENSGMOG00000003352
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Position
13:4763273..4780909
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AA seq
1434 aa
AA seq
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MEAAGASEERRRSVCILGSELVENYTVYVIQVTDGAHRWTVKHRYSDFHELHEKLSADWQ
VDKQLLPPKKMLGKNSPGLVERRRRELEVYLQTLFLRLLSSATPPPLASFLHFDLYERSG
VAAALAEALFHRGEDLLAGGQVYCLRPLQLHSVWEQLHLSTPSGPELHTHLAHILDFTCR
LRYLKIQGTQGPIGTSNIQESSLTFDLSIFKSLLHAEVSECSSQQIQGLPSLRRTLVTCS
VHHTTPSMMAILAPEASEFPQWEAESAEGAGPGSHVTAVIPLWSKLTTLDLSHNTITEID
ASVKLVPEVEFLDLSHNQLQSVDHLQYLYNLIHLDLSYNSLEVLQSAHTRLGNIQTLNLA
GNRLETLSGLNKLYSLVNLDLSHNLIAQLQEVRSVAGLPCLERLSLTHNPLCCSPDYRTR
TLALFWDRAAEVCLDGTAPSQQEVDTVEVLKAIQKAKETKDKLHSGGDKRVAGEPSLSPL
SAAPPAVSSSPSSPPSLQKAYCSSQEVRSREEEVVCPRLVCPDASSLLPSQIPPSAVCPS
PLASNPTAPCCSPGGGATDAARIPQPEDSSRSSSFSLPSPLLCLSSPLLSLSSNKDFITQ
LSLCLALALSQQEEEQQEVEEEVVQEVQQEEGQQEEVQQEEVQGELTSEHRDDVLPPAGC
PRSSPCSRDGYFEMGLGESCSPLSPAETQPRARDVRWCFWVEVEEEEKGKKEEVNEEKEE
EEERKEMQQKVGCLVFTDQHLGLFSLSADSPWANHNADQEARPGVEELVSGLQKEFLLPF
EEVVFSSLLPEPWVTLGVRSGPTQLWFICPAPQDTPLSALIQAKLPVSSEVTPHTTQNPQ
LLWSLLSPWEQQEVRGGGYLAHLLLPASGSSPCPAPLLTDILNQGEAPSRTPALLFLTPR
HLCVVKVDFSALASLTRSSTSSSSSSSSSSSSSSSSSWSRVTRVPLGAVVLLPRHRPDGP
QHKHRAGHVVEVVLGGWRLGMVFPLAQDRLSFLGELGARTASLEGLRTLALVRPPAPQPD
AAQTAVDRPSSELQRLTEENQPPAHLLAGLSPGQALLAGLPGPALQTLFKSCIAQWEGEE
VRQVLWLSVIFYISPETEVTSCLLLSNKAIYFLLEDSASSLSLSSEWDIADQSDPELCLC
VCLSISLSDLLSVNVGLFDQYFRLIGGSACQVVCCVSRDSYGTSHFLKELMSALSLDRTR
PDPEPVEQDFYTQFTSTTSGKMQNYELVHSSRVRFIYPNEDEMGDLTFIVADRKSPASSF
NILLYLLVFQVQVSDLPERTGHAYQDHGSTPAPWLHPRTLVLTASHIFLLDEDYVSYPLP
DFAKEPPCRERYQVREARRIRDVERVLLGYQTYPQALTLVLDELPGPDLLPPLHVDHFSR
GEGPSPGGGAGGGAQEVTWCIFVPAADSRERLVALLARQWEALCSRELPLELTG
NT seq
4305 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggccggagcgtccgaggagcggaggaggagtgtttgtatcctgggctcggag
ctggtggagaactacactgtgtacgtcatccaggtgaccgacggggcgcaccggtggacc
gtcaaacaccgctacagcgacttccacgagctgcacgagaagctgagtgctgattggcag
gtggacaagcagctcctcccccctaagaagatgctggggaagaactctccgggcctggtg
gagaggaggaggagggagctggaggtctacctgcagacgctcttcctgcgcctcctcagc
tccgccacgcccccccccctcgcctccttcctgcactttgacctctatgagaggagtggg
gtcgcagcggcgttggctgaggcgctgtttcacagaggtgaggacctgctggcggggggt
caggtgtactgtctgcgtccgctccagctgcactcggtctgggagcagctgcacctgtcc
acccccagcggaccggagctccacacacacctggcccacatcctggacttcacctgcagg
ctgcgctacctcaagatccagggaacgcagggaccaataggaaccagcaacatccaggag
agtagcttgacctttgacctgtccatcttcaaatcactgctgcatgcagaggtgagtgag
tgctcctcccagcagatccagggtctccccagcctccgaaggaccctggtcacctgcagc
gtccaccacaccaccccctcaatgatggccatcctggctccggaggccagtgagtttccc
cagtgggaggcggagtcagcagaaggggcggggcctgggtcacatgtgacggccgtcatt
cctctgtggagcaaactgaccaccctggacttaagccacaacaccatcacagagatagac
gcctccgtgaaactggttccagaagtggagtttctggacttgagtcacaaccagctgcag
tcagtagaccacctccagtacctgtacaacctgatccacctggacctgtcctacaactcc
ctggaggtcctccagtcggcccacacccgcctggggaacatccagaccctcaacctggcc
ggcaaccgcctggagacgctttctggcctcaacaagctgtactccctggtcaacctggac
ctcagccacaacctgatagcacagctgcaggaggtgcgcagtgtagcgggcctaccgtgt
ctggagaggctgtcgctgacccacaaccccctctgctgctccccggactaccgcacccgg
accctggctctgttctgggaccgcgccgcagaggtgtgcctggacggcacggccccctct
cagcaggaggtggacacggtggaggtgctgaaggccatccagaaggccaaggaaaccaaa
gacaaactccacagcggcggagacaagagggtggcgggagagcccagcctctctccttta
tctgctgctcctccagccgtctcctcctccccctcctctcccccctctctccagaaggcc
tactgttctagccaagaagtgaggagcagagaagaagaagtagtttgcccacgcctcgtc
tgccccgatgcctcctccctcctcccctcacagatcccgccctccgctgtctgtccgtct
cccctcgcgtccaatcccacggctccgtgctgcagtcctggaggcggagctacagatgca
gccagaattcctcaacctgaagactcctccaggagctcctccttctccctcccctcccct
ctcctctgcctctcctcccccctcctctccctctcctccaacaaagacttcattacccag
ctgtccctctgcctggccttggccttgagccagcaggaggaggagcagcaggaggtggag
gaggaggtggtgcaggaggtgcagcaagaggaggggcagcaagaggaggtgcagcaagag
gaggtgcagggggagctgacatctgagcacagagatgatgtgttgcctcctgctgggtgc
cccaggtccagcccctgctccagggacgggtactttgagatgggtctgggggagtcctgc
tcccccctgagccccgcggagacgcagcccagagccagagacgtgaggtggtgcttctgg
gtggaggtggaggaggaggagaaggggaagaaggaggaggtgaacgaggagaaggaggag
gaggaggagcggaaggagatgcagcagaaggtggggtgcctggtgttcactgaccagcac
ctgggtctcttctccttgtcagctgacagcccctgggccaatcacaacgcagaccaggag
gcgcgccccggtgtggaggagctggtgtccggtctgcagaaggagttcctgctgcccttc
gaggaggtggtgttctcctccctgctcccggagccatgggtcaccctgggggtccggtcc
ggaccgacccagctctggttcatctgccccgccccccaggacacgcccctctcagccctg
atccaggccaagcttcctgtcagctctgaggtgacgccacacactacccagaatcctcag
ctgctgtggtcgctcctcagcccctgggagcagcaggaggtgcgcggaggagggtacctc
gcccacctgctcctccctgcctctggctcctccccctgccccgcccccctcctgacagac
atcctgaaccagggggaggctccctccaggacccccgccctcctcttcctcaccccccga
cacctgtgtgtggtgaaggtggacttcagcgctctggcgtccctgacgaggagcagcacc
tcgtcctcctcgtcctcctcctcctcctcgtcctcctcctcctcctcctcctggagcagg
gtgacccgggtgcctctgggcgccgttgtcctcctgcctcgacaccgcccggacggaccc
caacacaaacacagggctggccatgtggtggaggtggtgctgggcggctggaggctgggc
atggtgttccctctagcccaagacaggctctccttcctgggggagctgggagccaggaca
gcctctctggagggtctgaggaccctggctctggtcagaccccccgccccgcagccagac
gctgcccagaccgctgtggaccgtcccagctctgagctccagaggctgacggaggagaac
cagcccccagcccacctgctcgccggcctctccccaggacaggcgctcctggctgggcta
cctggcccggcgctgcagacgctcttcaagagctgcatagctcagtgggaaggtgaggag
gtgagacaggttttatggctgtctgttatcttctacatatctccggagactgaggtgact
tcctgtctgctgctgtccaacaaagccatctacttccttttggaagactccgcctcctcg
cttagcctttcgtctgaatgggacatagcggaccagagtgacccggagctgtgtctgtgt
gtctgtctgtccatcagcctgtccgacctgctgtccgtcaacgtgggcctgttcgaccag
tacttccgcctcataggaggcagtgcgtgccaggtggtgtgttgtgtgagcagggacagc
tacgggacgtcccacttcctgaaggagctgatgtcagccctcagcctggaccggacccgg
ccagacccggagccggtggagcaggacttctacacccagttcaccagcaccacctcaggt
aaaatgcagaactacgagctggtccacagcagcagggtgaggttcatctaccccaacgag
gacgagatgggcgacctgaccttcatagtagccgaccggaagagccccgcctcctccttc
aacatactgctctacctcttggtgttccaggtccaggtttcagatcttccagaaagaaca
ggccacgcctatcaagaccatggctccacccccgcgccgtggctccacccccggaccctg
gttctgaccgcctcccacatcttcctattggacgaggactatgtcagttatcccctgcct
gacttcgccaaggaaccgccctgcagggagcgctaccaggtgcgcgaggcccgcaggata
cgggacgtggagcgggtgttgctggggtaccagacgtacccccaggccctgaccctggtc
ctggacgagctgcccggacccgacctgcttcccccgctccacgtggaccacttcagccgg
ggggaggggcctagccccgggggcggggccgggggcggggcccaggaggtcacatggtgt
atcttcgtgccggcggccgacagccgggagcgtctggtggcactgctggcccgccagtgg
gaggcgctgtgcagccgcgagctgccgctggagctcaccggctga
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