Gadus morhua (Atlantic cod): 115557064
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Entry
115557064 CDS
T10832
Name
(RefSeq) epiphycan-like
KO
K08127
epiphycan
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
gmh00535
]
115557064
Proteoglycans [BR:
gmh00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class III
115557064
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_9
LRRNT
LRR_5
Motif
Other DBs
NCBI-GeneID:
115557064
NCBI-ProteinID:
XP_030230506
Ensembl:
ENSGMOG00000036218
UniProt:
A0A8C5FRK9
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Position
13:complement(23812024..23846526)
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AA seq
392 aa
AA seq
DB search
MTREPHCPPSHNDLTLPPRHLSVWPRKQLVHSSPGKPPDSSPHRGTKDPQGRRVRRRRTK
SVPSTHDVMMALNPLVVPLTALLFLLAPRPSVGDVEGDDYDLNNAPDWDNLDPNGFGESY
DYDDLDQEIEVGTLAPPGQEDPPQAQGPSEPSEGDGTPAVPSLASAPVPLDFKEPGLFGP
ETGLGMPTCLLCVCLSGSVYCDDSDLKTIPPLPKDTTHFYGRFNKIQHVRNTDFINLNKL
KGIDLTGNRISDMGEDVFRSSPQLEQIVLSDNLLQALPWLPATMRHIDVRNNKLTSAGMH
PEGFKDMSQLEFLYLSNNHLSYIPTPLPESLRALHLQSNNIQSLQEDTFCNAQDRSYSRP
HLEDIRLDANPIHLRLFASSYACLPRLPLGGR
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgaccagggagcctcactgtcctccctcccataatgacctgactttaccgcccagacac
ctatcagtgtggccaagaaagcaactggtacattcctcccctgggaaaccgcctgacagc
tccccacaccgaggaaccaaggaccctcaaggacgaagagtaagacgcagaagaaccaag
tctgtaccttcaacgcatgacgtaatgatggctctgaaccccctggtggtccctctgacg
gcgctccttttcctcctggccccccgaccgagtgttggggacgtagaaggggacgactat
gacctgaacaatgcgccggactgggacaacctagaccccaatggctttggagagagttac
gactatgatgacctggaccaagagatagaggttggtacactggctcctccaggacaggaa
gaccctccacaagctcaagggccctctgagccctctgagggggacgggaccccagctgtt
ccgtccctggcctctgctccggtcccactggacttcaaggaacccggcctcttcgggccc
gaaaccggcctgggcatgcccacctgcctgctgtgtgtgtgtttgagtggaagtgtgtac
tgcgacgactcagacctgaagacaatcccacccctcccgaaggacaccacccacttctac
ggtcgcttcaacaagatccagcacgtcaggaacacagattttatcaacctgaacaagctg
aaaggaatcgaccttacagggaaccggatctcggacatgggggaggacgtgttccggagt
tcaccacagttagaacagatcgttctgtctgacaacctcctacaggccctgccatggctt
cccgccaccatgcggcacatcgacgtccgcaacaacaaactgacttctgctggcatgcat
ccggaaggattcaaggatatgagccaactagagttcctttatttgtccaacaaccatctg
agttatattcccacacccctgcctgagagccttcgagcacttcatctacagagcaacaac
atccagagcctgcaggaggacacgttctgtaacgcacaggaccgcagctacagccgcccc
cacctggaggacatccggctggacgccaacccaatccacctccgcctgttcgccagctcc
tacgcctgcctgccgaggctgcccctggggggccgctga
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