Gadus morhua (Atlantic cod): 115557099
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Entry
115557099 CDS
T10832
Name
(RefSeq) PR domain zinc finger protein 2-like
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh00310
Lysine degradation
gmh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
115557099
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmh03000
]
115557099
03036 Chromosome and associated proteins [BR:
gmh03036
]
115557099
Enzymes [BR:
gmh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
115557099
Transcription factors [BR:
gmh03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
115557099
Chromosome and associated proteins [BR:
gmh03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
115557099
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-C2H2_6
zf-C2HC_2
zf-C2H2_jaz
zf-H2C2_2
zf-C2HE
zf-C2H2_11
zf-MYST
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
115557099
NCBI-ProteinID:
XP_030230543
LinkDB
All DBs
Position
13:complement(16179747..16189066)
Genome browser
AA seq
1520 aa
AA seq
DB search
MTEMWEGEQGPKEEVDERPSSSGPVHAEMNPAPVESPAPTDVQDMSVVMIDEEELETRVD
KAGDAVEPQQLPSMQTPQETSLTAESREEEEQFPNCSKPGGESPQDLQPKSDSASLQGQE
LESLDADIDFDHDPDGDLEGDLQGESHPCLHCERHFSTKQGLERHIHIHTTANQQTHLFK
CRYCGKSFGSQVGRRRHERRHESGAKKKPGSLAGTANLLSSGGKAGGSSPEYTSPTNYIA
IGSQFPVAHQPIPELAKKESRPEADRPFTLEEYGESKELHPCKYCNKAFGTHTNMRRHQR
RIHERHLLPKGVRRKGMLPQEVSVQRLPNESPSGSPPPVYVPSADTEDEADRDEYVVDIS
KNISENLSFYIDGKILSTSTVSNCEVIEVNSRSAALFGLDAMIISPSQISQAFKVESKPI
AGKPLVSNLGQPTSKRRTTTPPLIPSLKMENETGFSASSSSSSSSTSSSSNVLVGGLFSQ
STESLAFQKEKTVYLSPKLKQLLQSQDSQKSTISQIGDSHRLASPLSVTSLPGASGRFKR
RTSSPPSSPQLSPTQKLDISKAEVGSLYTLKVPKLEGHRLSPVLNLTIHEDGDTVCTTEK
DMSNRSSSNCGGNACNQQPLDLSSSVSKRSDVISKTLGDSALDLSMQRKSTMDPELKGNP
PPQPPTKKRKPNTSMLEKVLMNEYAGLTSAGEEGPAALSSLGPLQPLSPSMTSESAHPSP
PSLTPVTMNPSSPATSSMTSPTPPPPVLPTIPPDMPSSPRSEPSDCSVSRPLPVLSPKSS
PRSNVDEVPSDTEEETSMAPEVQHSVDENHEQLDSAPHTPVKDPLKSSSTPSPTQPTPAE
PPTVEFEVLQKQDNCLTNGKPESKDPGSITDAKSLSPDSAPLTSQPHSPVVPTSTTTSHN
TSPPTLSPSVVLPVKKKDPVHYSEGMSDISHDADDSTCPAVKETPKEKGEDSETFCKTFV
CNVCEEPFPSIKTLNGHIVAHAVDWPYKCEFCVHLFVEARALLAHRTSLHGVGRIFVCSE
CSKEFAFLCNLEQHQKDLHPSQTCTHTTVESGKLRPHNYTDPSRAKEESRPSTPAPESEE
EAAPEREPTEKAPEVNGQSADDEPEPEDSSEELYTTIKIMASEGGKPKGPDVRLGLNQHY
PSFKPPPFPYHSRSHAGSVASATNFTTHNIPQTFSTAIRCTKCGNSFDNMPELHKHILAC
ANASDKKRYTPKKNPIPLKQIVKPQNGALSPAAASAGQSAFRRMGQPKRLNFNQEASGKA
KMSSLNKKKNQLVQKAISQKNKTASSVKKASVKVEEQDPEPHICPHCSREFTYPASLSKH
IAISCPMKPEPKKGKKGDVKQDAPQMSLRRKATDVDAADSEPKPLGKTRARSYGAAEPEL
LPASKGRTGAPVGRPKRPASFPASPAVTGKKKKKGQAHSPPPPPPPAMPVPDTPSDPAQR
PAVKAQRMGKEAAPKKAPEGNSPLGQQAKKEERFSLRTRERVGGPVTRSLQSVNTVATVE
VKTEQPLVPETKEPQETPLK
NT seq
4563 nt
NT seq
+upstream
nt +downstream
nt
atgacagagatgtgggaaggggaacaaggtcctaaggaggaggtggacgagaggccttct
tcttcaggtcctgtgcatgcagagatgaatcctgctcctgttgaaagtcctgctcctaca
gatgtgcaggacatgtctgtggttatgattgatgaggaggagctggagactagggtcgac
aaagcaggcgatgcagtcgaaccacaacagctgccatctatgcaaactcctcaggagaca
tctttgacagctgagtcgagagaagaagaggaacagtttcctaactgcagtaaacctggc
ggggagagtccccaggacttgcaacctaagtcggattctgcctctctgcagggccaggaa
ctggaaagcctggatgcggatatcgactttgatcatgaccctgacggtgaccttgaaggt
gacctccagggagagtctcatccatgcctgcactgtgagcgccacttttccaccaaacag
ggtcttgagcgacacatacacattcacaccacagccaaccaacagacgcacctcttcaag
tgccgctactgcggaaagtcctttggctcacaggttggacggcggaggcacgagagaagg
catgagagtggggctaagaagaagcccggctccttggcaggaactgccaatctccttagt
tcaggaggaaaggctggtggttcaagtcctgaatacacaagtccgaccaattacatagcc
ataggctctcaatttccagtagcgcatcagcccatccctgagttggcaaagaaagagtct
aggcctgaagctgaccgaccttttacattggaagagtatggtgagtccaaggaactgcac
ccctgtaaatactgtaataaggcctttggcactcacaccaacatgcgaaggcaccagaga
agaatacatgagcgccacttactgccaaagggtgtacgcaggaaaggcatgctgccccag
gaagtgtctgtccagaggctgccaaatgaatcccccagtggcagccccccccctgtctat
gtgcccagcgccgacacagaagacgaggctgacagagatgaatatgtagtggacatatcc
aaaaatatctctgaaaatctgagcttctacattgatggaaaaattttgtcaaccagtaca
gttagcaactgtgaggtgatagaggtcaattctaggtctgcagcactgtttggccttgat
gcaatgataatcagccccagtcaaatcagccaggcattcaaagtggagagcaaacctatt
gctggaaaaccgttggtgtccaacctcggtcagccaacatcaaaaaggagaactacgaca
ccgcctcttattccatctctcaaaatggaaaatgaaacaggattttctgcatcttcttcc
tcatcatcatcatcaacctcttcctcatcaaatgtattagtaggcggactgttctcccag
tccacagaatcattagcatttcaaaaagaaaaaacagtctatctttcccctaagctgaaa
cagctccttcagtcacaggacagtcagaagtccaccatttcccagataggagacagccat
agactggcctcccctctgtcggtcacctcactgccaggggcctcgggtcggttcaagagg
agaacatcctctcctccgtcttccccacagctcagtcccacacagaaactggatatctct
aaagcggaggtcggaagcttgtacactcttaaggtgccaaagctggagggccaccgcttg
tcccctgtgttgaaccttactatccatgaggacggagatactgtttgtaccactgaaaag
gacatgtctaaccggtcttcctccaactgtggtggaaatgcctgcaatcagcaacccttg
gacctgtccagctctgtcagcaagcggagtgacgtaattagcaagacgctgggcgattct
gcactggatctaagtatgcagcggaagagcaccatggatcctgagttaaagggcaatcca
ccaccacagccaccgaccaagaagagaaagccaaacacgagcatgcttgagaaggttctg
atgaatgagtatgctggcctcacctcggcaggagaagagggccccgctgccttgtcgagc
ctcgggccacttcagcctctctccccaagcatgacgtcggaatcggcccacccatcgccg
ccctccctcacgcctgtcaccatgaacccctcctcccccgccacttccagcatgacctcc
ccaacaccccctcccccagttctgcccaccataccaccagatatgcctagctctcctcgt
tcagagccctccgactgctctgtgtccagacctctcccggtgctatcacccaagagctct
cccaggtccaatgtggacgaggttccgtctgatacggaggaggagacatcgatggctcca
gaagtccagcacagtgttgatgagaatcacgagcaacttgattcagcccctcacacacca
gtcaaagatcctctaaagagctcatccactcctagcccaactcagcccacaccagcagag
cctcccactgtggagtttgaagttctacagaaacaagacaattgtctgaccaacggcaag
ccggagagtaaagaccccggctccataacagatgccaagtccttgtcccctgactctgcg
cctttaacatcccaaccacactcgcctgtcgtgcccacatctacaaccacatcgcacaat
acatccccaccaacgctgtcgccatctgttgttctgcccgtgaaaaagaaggatcccgtt
cactactcggaggggatgtcggacataagccatgacgcagatgactcgacatgtcctgct
gtaaaagaaactcccaaggagaagggagaggattcggagaccttctgcaagacctttgta
tgcaacgtctgtgaagaaccattcccctccataaaaactctgaacgggcacatcgttgcc
cacgctgttgattggccttataaatgtgaattctgtgtgcatttgtttgtggaggcccgg
gccctgctagctcatcgaacgtccctacacggcgtaggccggatcttcgtgtgctccgaa
tgctcgaaggagtttgcctttctctgtaacctggagcagcatcagaaggatctgcatccg
agtcagacctgcacgcacaccacggtggaaagtggcaaactgaggccacacaactacaca
gacccatccagggccaaagaggagagccgaccctccacaccagcaccagagagcgaggag
gaagcggctccagagagggagcccactgaaaaggcccctgaggttaacggacagtcggca
gacgatgagccggagccagaggactcctcagaggaactgtacactacaataaaaatcatg
gcctctgagggagggaagcccaaaggccccgacgtccgcctcggcctcaatcaacactac
cctagctttaagccgccgcctttcccctaccacagccgatcccacgccggctctgttgcc
tcggccaccaacttcaccacccacaacataccgcaaaccttcagcacagccatccgctgc
acaaagtgtggcaacagttttgacaacatgcctgagctgcacaagcacatattggcctgt
gcgaacgctagcgataagaagcgctacactcctaagaagaatcccatccctcttaaacaa
atagtgaagccacagaatggcgccttgtcgccagccgcggccagcgccggacaaagtgct
ttccgtcgaatgggccagcctaagagactcaatttcaatcaagaggcctctggcaaagcc
aaaatgagttcccttaacaagaagaagaaccagttggtccaaaaggcgatttcacagaaa
aacaaaacggccagcagtgtgaaaaaggcttctgttaaagtggaggagcaggaccccgag
ccgcacatctgccctcactgcagccgcgagttcacctaccccgccagtctcagcaaacac
attgccatcagctgtcccatgaagcctgagcccaaaaagggcaagaaaggggacgttaaa
caggatgcaccccaaatgagcctgagaaggaaagccacagatgtggacgccgccgattcg
gagcccaaaccgcttgggaagacccgggctcgcagctacggtgctgccgagcctgaactc
ctgccggccagcaagggaagaacaggcgctcccgtgggccggcctaaaagacctgcctcg
ttcccggcctcaccagcggtgactggtaaaaaaaagaagaagggccaagctcactctcca
ccaccaccaccacctcctgccatgccggtcccggacactccaagtgacccggcgcagcga
cctgctgtgaaagcacagcgcatggggaaggaggcggcgcccaagaaggccccagagggc
aactctccgctcgggcagcaggcgaaaaaggaggagcgcttttccctgcgaaccagggag
agggtgggcggaccggtcaccaggagcctgcagagcgtcaacacggtggctaccgtggag
gtgaaaaccgagcagccgctcgtcccggagacaaaagagcctcaggagacgccgttgaag
tga
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integrated database retrieval system
