Gadus morhua (Atlantic cod): 115557165
Help
Entry
115557165 CDS
T10832
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115557165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmh03021
]
115557165
03036 Chromosome and associated proteins [BR:
gmh03036
]
115557165
Transcription machinery [BR:
gmh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
115557165
Coactivators
SAGA/TFTC/STAGA complex
115557165
Chromosome and associated proteins [BR:
gmh03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
115557165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
115557165
NCBI-ProteinID:
XP_030230631
LinkDB
All DBs
Position
13:complement(18324541..18334461)
Genome browser
AA seq
831 aa
AA seq
DB search
MNAHTSGRAAPVTSDSTSNTSTMTAITSGSVLSKGNAIRTATSSNSVIQTHFTNSQNVAA
STQPASQERGPMMTAMRTPMQGTGPSDTNMDVTLNGPNNTAGPTLVANAAGQIAPSAHTS
VRAQTPLVNNGQLPAAAVSLGVGSHIIRAEPPKQIIQTLPQQGLPLGSVIGPRHVSPVAL
APSPGGMRAPTQQLLAPRLPQTPAGQPNLQNFQLPPGMVLVRSESGQLLMIHQQALAQMQ
AQAAAAPRPATPTAMPLAQAPGIPMSSRPMGPGSMVRQASPVAPTTTLHRPPVLQSSGGP
VPPGSATSTSPETTVAPPTSGPISNETMENVKKCRNFLSTLIKLASTGKQSAQTAENVKE
LVKELLEGKLEAEDFTSKLYSELNSSPQPYLVPFLKRSLPALRQLTPNAALFAQQSHVPQ
PTASTPPPAKQPSSPATVVLRSPAPHLTTAVTRPQVQPDISRPGPVNQMLLQPQPLAVGM
RPPVNMATAPMVTPRTQSPGKILVGPQQLRQLTSGRSTCLLCQRCVWSVCRCDADTSVFP
VGPPGRTGLLPVFKPVPPAAASLAQKNQLKEAGGTFKDEDDINDVASMAGVNLTEESARI
LATNSELVGAVTRSCKDEAFLSTAVLQRRMLEIGKKFGVSELGVDVGTFVSHATQQRLQN
LLEKVTQVAQHKNFSFKEESSYEGSSDVRAQLRFFEQLDQLEKQRKEGQERQILLKAAKS
RARQEDPEQLRLKQKAKEMQQQELAMMRQKEANLTALAAIGPRKPRKPADASASAGAAEG
SGSGSSLGAGSSGSRPTRQRITRINLKDLLFCLETERPTAHSQFLYKGFLK
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctcatacttcaggacgcgctgcccccgtcacaagtgacagcaccagcaatact
agcacgatgacagcgatcaccagtggatccgttttgtcaaaggggaacgcgatcagaaca
gccacttcgtcaaacagtgtcatccagacccatttcaccaactcacagaatgttgctgcc
tcaactcagcctgcgagccaggagaggggacctatgatgacagcgatgaggacgcctatg
caaggcacgggaccgtcggacacaaacatggatgtaactttgaacggaccaaacaatacc
gcaggacccactttggtagccaacgcggcgggtcagatcgctccgagcgcgcatacaagt
gtgcgcgcacagactccgctcgtgaacaatggtcagctacctgctgcggcggtgtcgctc
ggagtgggctcccacatcatcagggctgagccgcccaaacaaataattcagacgttaccg
caacaggggctgccgctcggcagcgtcattggtcccaggcacgtgagtccggtggcttta
gctccgagtccaggagggatgcgagcgccgacgcaacagctgttggctccaaggctcccg
cagacccctgcgggacagccaaacctacagaacttccaactgccccctggcatggtgctg
gtgcgcagtgagagtgggcagctgctgatgatccatcaacaggccctggctcagatgcaa
gcccaggccgccgcagcccctcgtcccgccacccccacagccatgccccttgctcaggcc
cctgggatccccatgagcagcaggcctatgggccccggtagcatggttcgacaggcatcc
cctgtggccccaaccactactctccacagaccccctgttctccagagctccggtggacct
gtgccacctggctcagcaaccagcacgagccctgagaccaccgtggccccgcctacctca
ggacccatcagcaatgaaacaatggaaaacgtgaaaaaatgcaggaacttcctgtccacg
ctgatcaagctggcgtcgacgggcaagcagtcggcacagacagcggaaaacgtcaaagaa
ctggtcaaggagcttctggagggcaagctggaggccgaggacttcaccagcaaactgtac
agcgaactcaactcctcaccacagccttacctagtgcctttcctcaagagaagcctccca
gctctaaggcagctcacccccaatgcagcgctgttcgcccagcagagccacgtcccccag
cccaccgcctccaccccaccccctgccaaacagccttcctccccggccacggtggtcctg
aggagccccgcccctcatctcaccacggcggtaaccaggccccaggtccagccggacatc
agcagacctggacccgtaaaccaaatgcttctccaacctcagccgctggcggtagggatg
cgaccgccggttaacatggcaacagcccctatggtgacgcccaggacccagagccctgga
aagatccttgtgggaccccagcagctcaggcagctgacctcaggtcggtccacctgcctc
ctctgccagagatgtgtctggtccgtgtgtcggtgtgatgcagatacctctgttttccct
gtaggtcctcccggaaggacaggcctcctgcctgtgtttaaacctgttccacctgccgct
gcatctcttgcacagaagaatcagctgaaagaggctggggggactttcaaggacgaagat
gacatcaacgacgtggcctccatggcaggagtcaacctgacggaggagagtgcacgtatc
ctagcaaccaactctgagctggtgggggcagtgacacgctcctgtaaggacgaggccttc
ctctctacagccgtgctgcagcggaggatgctggagatagggaagaagtttggtgtgagc
gagctgggcgttgacgtggggacgtttgtatctcacgccactcagcagcgtctccagaac
cttctggaaaaggtgactcaggtggcacaacacaagaacttcagcttcaaggaggagagc
agctatgagggcagcagtgacgtgcgtgcccagttacgcttctttgagcagcttgaccag
ctggagaaacagagaaaggaggggcaggagagacagatccttctcaaggcagctaagtct
cgtgcccgccaggaggaccctgagcagctgcgcctcaaacagaaggccaaggagatgcag
cagcaggagctggccatgatgcgacagaaagaggccaacctcaccgccctggcggccatc
ggccccaggaagcccaggaagcctgcggacgcgtcggcctccgctggggcagccgagggc
tctggatcggggtcttcgctgggtgcggggtcgtcggggtccagacccacgcggcagcgc
atcacacgcatcaacctcaaggacctgctgttctgcctggagacagagaggcccaccgca
cactctcagttcctctacaagggcttcctcaagtag
DBGET
integrated database retrieval system
