Gadus morhua (Atlantic cod): 115557303
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Entry
115557303 CDS
T10832
Symbol
usp30
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30 isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
115557303 (usp30)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gmh01002
]
115557303 (usp30)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmh04131
]
115557303 (usp30)
04121 Ubiquitin system [BR:
gmh04121
]
115557303 (usp30)
Enzymes [BR:
gmh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
115557303 (usp30)
Peptidases and inhibitors [BR:
gmh01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
115557303 (usp30)
Membrane trafficking [BR:
gmh04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
115557303 (usp30)
Ubiquitin system [BR:
gmh04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
115557303 (usp30)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUF5700
Motif
Other DBs
NCBI-GeneID:
115557303
NCBI-ProteinID:
XP_030230885
Ensembl:
ENSGMOG00000009895
LinkDB
All DBs
Position
13:26102152..26112241
Genome browser
AA seq
504 aa
AA seq
DB search
MLWRRLETSEQLVREFLSTGSAVRSLMKNWGVVGGIAAAVAAGAYIIWGPITGQKKKKRG
MVPGLLNLGNTCFMNSLLQGLAACPSFIRWLESFSQRTEGQSSQDKQLSSMLLNLLKALS
SDAPGEENVLDAGCLLDVLRLYRWHINSFEEQDAHELFHVLTSSLEEERDRLPRVCHLFD
IKSLKSIPEQADKTLSCRSTATLHPILNPWKFQHPFHGRLTSNMSCKRCKHQSPVRYDSF
ESLSLPIPSPQWGRPLSLDQCLQYFISSETIKEVECENCTKLQQGPREKGHVLENQRTTF
VKQLKLGKLPQCLCIHLQRLTWSNEGTPIKRQEHVHFTEFLSMDRYKHNGSSVQRMQRTK
CPPISADTETQQDLVDKPMQNGTDSNHHNNNKPLANGSMASVHQFIHSPAVRTQLNFSHD
YRPSEYLFQLTAVLVHHGDMHTGHFITFRRCPAPHPQGQHPSQWLWTSDDSVRKATLQEA
LSSNAYLIFYERVQRSSRALRAEV
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgttgtggcgccgactagagacctctgagcagctcgttcgagagttcctcagtactgga
tccgcagtaagaagcttgatgaagaactggggtgttgtcggtggtatagctgcagcagtg
gcagctggagcttacattatatggggaccaatcacagggcaaaagaagaaaaagagaggg
atggttccaggtttgttgaacttgggcaatacctgcttcatgaattcattgctccagggt
ctggcagcatgtccctccttcatacgctggctggagagcttttcacaaagaactgaggga
cagtccagtcaagacaagcagctgtccagcatgctcctgaaccttctcaaagccctgtcc
agcgatgcgcctggggaggagaatgtgcttgatgctgggtgcctgttggatgtcctcaga
ttgtacaggtggcacatcaactcttttgaagagcaggatgctcatgagctttttcatgtg
ctcacgtcctctctggaagaggaaagggatcggctgccaagagtctgtcatttgtttgac
attaagtcccttaagagtatcccggagcaagctgacaagactctgagttgcagaagtaca
gccacacttcatccaatcctgaatccttggaagtttcaacatcctttccatggccgtttg
acaagcaatatgtcttgcaagcgctgcaagcatcagagtccagtgcggtacgactcattt
gaaagcctttccttacccataccgtctcctcagtgggggcggcccctctcactcgatcaa
tgtcttcagtatttcatctcctctgaaaccatcaaagaggtggagtgtgaaaactgcacc
aagcttcaacagggtcccagagaaaagggccatgttctggaaaaccaacggaccacattt
gtcaaacagttgaaactgggaaagctgccacagtgcctgtgtattcacctgcagaggctc
acctggtccaatgaagggactcccatcaagagacaggaacatgtgcacttcacagagttc
ctctccatggaccgctacaaacacaatggatcctcagtccagaggatgcaacgcaccaaa
tgtccccccatatccgccgacacggagacccaacaggacctggttgacaagccaatgcaa
aatggcaccgacagcaaccaccataacaacaacaagccccttgccaatggatcaatggct
tcagttcatcaattcatccactcccctgccgtgagaacacagctcaacttctcacatgac
tacagaccgtcagagtacctgttccagctcaccgccgtgctggtgcaccatggagacatg
cacacgggacacttcatcaccttccgccgctgccccgccccgcacccccaaggccaacac
ccctcacagtggctctggacatcggatgactctgtacgcaaggccaccctgcaggaggca
ctctcctccaatgcttacctgattttctatgaaagggttcaacggtcaagccgagctttg
cgggcagaggtgtag
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