KEGG   Gadus morhua (Atlantic cod): 115557308
Entry
115557308         CDS       T10832                                 
Symbol
wdr1
Name
(RefSeq) WD repeat-containing protein 1
  KO
K24736  WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
gmh  Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:gmh04990]
    115557308 (wdr1)
Domain-containing proteins not elsewhere classified [BR:gmh04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   115557308 (wdr1)
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR3_2nd Beta-prop_EML EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 WD40_Gbeta Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_Aladin Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_WDR41 Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_SCAP Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_HPS5 Beta-prop_WDR35_TULP_N Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_Vps41 Beta-prop_VPS8 Tricorn_2nd Beta-prop_DCAF4 RMC1_N Beta-prop_NUP159_NUP214 Beta-prop_RIG_1st PROPPIN Beta-prop_Nup120_160 NBCH_WD40 Beta-prop_WDR11_1st DUF7165 WD40_RFWD3 WD40_like Beta-prop_IFT122_2nd Beta-prop_DCAF12 DUF5711 Beta-prop_WDR35_2nd Beta-prop_At4g14310 HPS3_N
Other DBs
NCBI-GeneID: 115557308
NCBI-ProteinID: XP_030230894
Ensembl: ENSGMOG00000009047
LinkDB
Position
13:12393642..12400899
AA seq 606 aa
MSYESKHTFASLPQMERGVSKVLGRDPKGNNFLYANGKTVIIRNIDNPSIADIYTEHAQQ
VTVACYAPSGFYIASGDVSGKIRIWDTTQKEHLLKYEYQPFSGKIRDIAWTEDSKRMAVV
GEGREKFGAVFLWDSGSSVGELAGHSKSINSVDLKPSRPYRLISGSDDMTVAFSEGPPFK
FKFTLKDHTRFVNCVRFSPDGNRFAAAGADGLIIICDGKTGEKISALGGEKAHNGGVYAV
SWSPDSSQLISASGDKTVKLWDVSTGTAVTTFNMGNDVMDQQLGCLWQKDHLISVSLSGN
INYLDKNNPDKPLRVIKGHSKSVHCVTVHKIDGKSIIFSASHDGHINYWDAETGENDCLQ
GKGHTNQVNKMVVDQAGQLVSCGMDDTVRFTDTQTKEYSASDVVKMDAQPKCVSIAPGGL
TLVVCIDLVVLLKDKKKVFTLEKLDYEPETGAIHPGGTTAAVGGADGKVRLYSVQGNSLK
EEGRTLEATGRVTAMAFSHDGAHLAVTDEKKVLRIFTVADDYAIKDDFYGHHAKIVSVAW
APDNEHLATSGMDMMVYIWTISDSDKRLKIPDAHRLHHVTSLAWVDDHTLVTSSYDACVK
QWTIMY
NT seq 1821 nt   +upstreamnt  +downstreamnt
atgtcatatgagtcgaaacacacgtttgccagtctcccgcagatggagaggggagtgtcc
aaagtacttggcagagatcccaaagggaacaactttctctatgccaatggaaagactgtt
atcatcaggaacattgataatccatctatagcagacatctacacagagcatgcccagcaa
gtaactgtcgcctgctatgcacccagtggcttttacatcgcctctggagatgtgtcggga
aagatccgtatctgggacaccacccagaaggagcacctgctgaagtacgagtaccaaccg
ttttccggcaagatccgagatattgcctggactgaggacagcaagagaatggctgtggtt
ggcgagggacgtgagaagtttggagcggtgttcctgtgggactctgggtcgtcagtgggt
gagctggcgggacacagtaaatccatcaactctgtggacctcaaaccctctcgcccctac
cgcctcatctctggcagtgacgacatgactgtggctttctctgaggggcctccattcaag
ttcaagttcacattaaaggaccatacccggtttgtcaattgtgtgcgattctcccctgat
gggaaccgttttgccgctgctggagctgatgggctgatcatcatatgtgatggaaagacc
ggcgagaaaatctctgcacttgggggagagaaagcccacaatggaggagtttacgccgtg
tcctggagccccgacagctcccagctgatctccgcctcgggggacaagacggtgaagcta
tgggacgtcagcacgggtacggccgtcaccaccttcaacatgggcaatgatgtcatggac
cagcagctgggatgcctgtggcagaaggaccacctcatcagtgtctccctgtcggggaac
atcaactacctggacaagaacaacccagacaagcccctccgcgtcatcaagggtcacagt
aagtccgtccattgtgtgacggttcacaagattgacgggaagtcaatcatcttctctgca
agtcacgatggacacatcaattattgggatgcggaaactggagagaatgactgccttcag
gggaagggtcacaccaaccaggtgaacaagatggtggtggaccaggccggccagctggtt
agctgcggcatggacgacaccgtgcgcttcaccgacacccaaaccaaggaatacagtgcc
tctgatgtggtgaagatggacgcccagcctaagtgtgtgtccatagcaccagggggctta
acgctggtagtttgcattgacctggtcgtcttgctgaaggacaaaaagaaagttttcact
ctggaaaagctggactacgagccagagaccggagcgatacatcccgggggcactactgca
gccgtcgggggcgccgacggcaaggtgcgtctgtactccgtccagggcaacagtctgaag
gaagagggccgcaccctggaggccacggggcgggtcacagccatggccttctcccacgac
ggagctcacctggccgtcaccgacgagaagaaggtcctccgcatcttcacggtggcagac
gactacgcgatcaaggatgacttctatggtcaccatgctaaaatagtctctgtggcctgg
gcccctgacaacgagcacttagccaccagcggcatggacatgatggtttacatctggaca
atctctgattctgataagaggcttaagatcccagatgcccaccggttgcatcacgtcacc
agcctggcctgggtggacgaccacaccctggtgacctcctcatacgatgcctgtgtcaag
cagtggactatcatgtactga

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