Gadus morhua (Atlantic cod): 115557379
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Entry
115557379 CDS
T10832
Name
(RefSeq) sortilin-like
KO
K12388
sortilin
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
115557379
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GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
End_beta_propel
Motif
Other DBs
NCBI-GeneID:
115557379
NCBI-ProteinID:
XP_030231004
Ensembl:
ENSGMOG00000016356
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Position
13:complement(19790626..19806019)
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AA seq
817 aa
AA seq
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MFSIYCIFAFGVVFPLLAKDFPEAEYLAGGIQGKGLRHLRPRDLISGGNITSLGHSKHSK
RSAEVTGLTCTSLSGIESTIKNNTHTFTFNVRSMGSLSLAWVGDGVGVLLVLTTFQVPMF
MMQFGQSSLYRSEDYGKTFKDVTHLIDHTFVQAEFGIGISPDHSGKVILTGDRSEVGGTR
VFRSRDYGLSFTASDLPFLPLIQMLYNPADCNILLTLSMTLDLWLSEDFGATWSKIHVSV
CLVRWGTQNSIYLTTNRDGSCNDKGMLELKRSRDNGRSFQTIATRVFSFVLGGRFVFASI
MTGLGTERMIHVSMDGGDVWNMAQLPVVNHEQFYSILTANQDMVFMHVDDPGDSGVGTVY
VSDDRGTVFSKSLERHLYTSTGSDTDFTVISSLRGVYMTSVLTQENTVETVITFDQGAKW
QALRSPQNGHCDMQTAANKPERCRLHIHASYSTTLKMNVPMLPLSQPNAVGLILAHGSMG
DSVSVLSPDVYVSDDGGYSWLLALRGPHHYAILDSGGLLVALEHSNLPIRQIKFSTDEGQ
CWHVYNFTSDPLHFSGMDSEPGSRSMNVSLWGYRTDFSKWEVITIDFGKLLHRDCGDEDY
VKWLAHSADLSDPGNGCMLGYKEQYQRLKKDSVCWNGRGYTVAKQPTPCPCTMDDYHCDF
GYYRSEPSGECVEQEEMKGHPLQYCLNGTTEQLLTSGYRRIPGDQCEGGFQPHREETDLS
KRCTSSNLEPESLLKVSVSNTAVIVMVVLVLLLTSAATGVWLVKKYVCGGRFLVHRYSVM
REHAEANGLEEAEHLDAHTMESGKTHYHDDSDQDLLE
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgttttctatatattgcatttttgctttcggggtggttttcccactacttgccaaggat
tttccagaagcagaatacctcgccggcgggatacagggaaagggtttgagacacttaaga
ccgagggatcttatcagtggtgggaacataacaagcttgggacattcaaaacacagtaaa
cgaagcgcagaagtgactgggctaacatgcacatctttatctggaatagagtctacgata
aaaaacaacacgcatactttcaccttcaacgtgcggagcatgggctccctatcgctggcc
tgggtgggagatggcgtgggagtgctgttggtcctgaccacgtttcaggtgccgatgttt
atgatgcagttcggtcagtccagcctctacagaagtgaagactatgggaagacattcaag
gacgtgacccacctgattgaccacacctttgtccaggctgagtttggcataggcatcagc
cccgatcactccggcaaggtcatactgaccggtgatcggtcagaagtcggcggcactcgt
gtgtttcgttcccgggactacggtctgagtttcactgcgtccgacctgccgttcttgccc
ctcatccaaatgctgtacaacccagccgactgcaacattctcctcacactcagtatgaca
ttggacctgtggctgtctgaggactttggcgccacctggagtaaaatccatgttagtgtt
tgtctggtcagatggggtacgcagaacagcatctacctaacgacaaaccgtgacggctca
tgcaacgataaaggaatgctggagttgaagaggagcagagacaacgggagaagtttccag
accatcgccacgcgggtcttctcctttgtgctaggagggcgctttgtgtttgcttccatc
atgactggtttgggcaccgagcgcatgatccacgtgtcaatggacggaggagacgtctgg
aatatggcgcagcttcctgtggtcaaccatgagcagttctactccatcctgacagccaat
caggacatggtcttcatgcacgtcgacgaccccggagactccggggtggggaccgtctac
gtgtcggacgaccgaggcaccgtgttctccaagtctctggagcgccatctctacacctcc
acgggcagtgacaccgacttcacagtcatctcttccctccggggagtctacatgaccagc
gtgctcacacaggagaacacagtggagacagtgatcaccttcgaccagggagccaagtgg
caagctctgcgctcgcctcagaacggccactgtgacatgcaaactgctgcgaataagcct
gagagatgcagactacacatccacgcctcctacagcaccacgctcaagatgaatgttccc
atgctgcctctctcacagcccaacgctgtgggcctcatcctggctcatggcagcatgggg
gactcagtgtcagtgctctcccctgacgtgtacgtgtcggacgacggaggctactcctgg
ctgctggccctcaggggcccccaccactatgccatcctggactctgggggcctgctggtg
gccctggagcactccaacctaccgatccgccagatcaagttctcaacagatgagggccag
tgctggcacgtgtacaacttcaccagcgacccgctccacttcagcgggatggacagcgag
cccggctctcgctccatgaacgtcagcctctggggctacaggaccgacttcagcaagtgg
gaggtgatcaccatagactttggaaagctgctccacagagactgtggtgatgaggactac
gtgaagtggctggcccactctgctgacctcagtgaccccggcaacggctgcatgcttggc
tacaaggagcaataccagcggctcaagaaggactcagtgtgctggaacggcaggggctac
accgtcgccaagcagcccaccccctgcccctgcaccatggacgactatcactgtgacttt
ggctactaccggtcagagcccagtggggagtgtgtggagcaggaggagatgaagggccac
ccgctgcagtactgtctgaacgggaccacggagcagctcctcacctccggctaccggagg
attcccggagaccagtgtgaggggggattccaaccgcacagggaggagacagacctgagc
aagaggtgcaccagcagcaatctcgagcccgaatccctgctcaaggtcagcgtgtcaaac
actgctgtgatcgtgatggtggtcctcgttctcctactgactagcgctgccacgggcgtc
tggctggtgaagaaatacgtctgtggagggaggttccttgtgcaccggtactctgtgatg
agggaacatgcagaggccaatgggttagaggaagcggaacatctggatgctcacacaatg
gaatctgggaagacacattaccatgatgattcagatcaggacctgttagaataa
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