KEGG   Gadus morhua (Atlantic cod): 115557379
Entry
115557379         CDS       T10832                                 
Name
(RefSeq) sortilin-like
  KO
K12388  sortilin
Organism
gmh  Gadus morhua (Atlantic cod)
Pathway
gmh04142  Lysosome
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome
    115557379
SSDB
Motif
Pfam: Sortilin-Vps10 Sortilin_C BNR_6 End_beta_propel
Other DBs
NCBI-GeneID: 115557379
NCBI-ProteinID: XP_030231004
Ensembl: ENSGMOG00000016356
LinkDB
Position
13:complement(19790626..19806019)
AA seq 817 aa
MFSIYCIFAFGVVFPLLAKDFPEAEYLAGGIQGKGLRHLRPRDLISGGNITSLGHSKHSK
RSAEVTGLTCTSLSGIESTIKNNTHTFTFNVRSMGSLSLAWVGDGVGVLLVLTTFQVPMF
MMQFGQSSLYRSEDYGKTFKDVTHLIDHTFVQAEFGIGISPDHSGKVILTGDRSEVGGTR
VFRSRDYGLSFTASDLPFLPLIQMLYNPADCNILLTLSMTLDLWLSEDFGATWSKIHVSV
CLVRWGTQNSIYLTTNRDGSCNDKGMLELKRSRDNGRSFQTIATRVFSFVLGGRFVFASI
MTGLGTERMIHVSMDGGDVWNMAQLPVVNHEQFYSILTANQDMVFMHVDDPGDSGVGTVY
VSDDRGTVFSKSLERHLYTSTGSDTDFTVISSLRGVYMTSVLTQENTVETVITFDQGAKW
QALRSPQNGHCDMQTAANKPERCRLHIHASYSTTLKMNVPMLPLSQPNAVGLILAHGSMG
DSVSVLSPDVYVSDDGGYSWLLALRGPHHYAILDSGGLLVALEHSNLPIRQIKFSTDEGQ
CWHVYNFTSDPLHFSGMDSEPGSRSMNVSLWGYRTDFSKWEVITIDFGKLLHRDCGDEDY
VKWLAHSADLSDPGNGCMLGYKEQYQRLKKDSVCWNGRGYTVAKQPTPCPCTMDDYHCDF
GYYRSEPSGECVEQEEMKGHPLQYCLNGTTEQLLTSGYRRIPGDQCEGGFQPHREETDLS
KRCTSSNLEPESLLKVSVSNTAVIVMVVLVLLLTSAATGVWLVKKYVCGGRFLVHRYSVM
REHAEANGLEEAEHLDAHTMESGKTHYHDDSDQDLLE
NT seq 2454 nt   +upstreamnt  +downstreamnt
atgttttctatatattgcatttttgctttcggggtggttttcccactacttgccaaggat
tttccagaagcagaatacctcgccggcgggatacagggaaagggtttgagacacttaaga
ccgagggatcttatcagtggtgggaacataacaagcttgggacattcaaaacacagtaaa
cgaagcgcagaagtgactgggctaacatgcacatctttatctggaatagagtctacgata
aaaaacaacacgcatactttcaccttcaacgtgcggagcatgggctccctatcgctggcc
tgggtgggagatggcgtgggagtgctgttggtcctgaccacgtttcaggtgccgatgttt
atgatgcagttcggtcagtccagcctctacagaagtgaagactatgggaagacattcaag
gacgtgacccacctgattgaccacacctttgtccaggctgagtttggcataggcatcagc
cccgatcactccggcaaggtcatactgaccggtgatcggtcagaagtcggcggcactcgt
gtgtttcgttcccgggactacggtctgagtttcactgcgtccgacctgccgttcttgccc
ctcatccaaatgctgtacaacccagccgactgcaacattctcctcacactcagtatgaca
ttggacctgtggctgtctgaggactttggcgccacctggagtaaaatccatgttagtgtt
tgtctggtcagatggggtacgcagaacagcatctacctaacgacaaaccgtgacggctca
tgcaacgataaaggaatgctggagttgaagaggagcagagacaacgggagaagtttccag
accatcgccacgcgggtcttctcctttgtgctaggagggcgctttgtgtttgcttccatc
atgactggtttgggcaccgagcgcatgatccacgtgtcaatggacggaggagacgtctgg
aatatggcgcagcttcctgtggtcaaccatgagcagttctactccatcctgacagccaat
caggacatggtcttcatgcacgtcgacgaccccggagactccggggtggggaccgtctac
gtgtcggacgaccgaggcaccgtgttctccaagtctctggagcgccatctctacacctcc
acgggcagtgacaccgacttcacagtcatctcttccctccggggagtctacatgaccagc
gtgctcacacaggagaacacagtggagacagtgatcaccttcgaccagggagccaagtgg
caagctctgcgctcgcctcagaacggccactgtgacatgcaaactgctgcgaataagcct
gagagatgcagactacacatccacgcctcctacagcaccacgctcaagatgaatgttccc
atgctgcctctctcacagcccaacgctgtgggcctcatcctggctcatggcagcatgggg
gactcagtgtcagtgctctcccctgacgtgtacgtgtcggacgacggaggctactcctgg
ctgctggccctcaggggcccccaccactatgccatcctggactctgggggcctgctggtg
gccctggagcactccaacctaccgatccgccagatcaagttctcaacagatgagggccag
tgctggcacgtgtacaacttcaccagcgacccgctccacttcagcgggatggacagcgag
cccggctctcgctccatgaacgtcagcctctggggctacaggaccgacttcagcaagtgg
gaggtgatcaccatagactttggaaagctgctccacagagactgtggtgatgaggactac
gtgaagtggctggcccactctgctgacctcagtgaccccggcaacggctgcatgcttggc
tacaaggagcaataccagcggctcaagaaggactcagtgtgctggaacggcaggggctac
accgtcgccaagcagcccaccccctgcccctgcaccatggacgactatcactgtgacttt
ggctactaccggtcagagcccagtggggagtgtgtggagcaggaggagatgaagggccac
ccgctgcagtactgtctgaacgggaccacggagcagctcctcacctccggctaccggagg
attcccggagaccagtgtgaggggggattccaaccgcacagggaggagacagacctgagc
aagaggtgcaccagcagcaatctcgagcccgaatccctgctcaaggtcagcgtgtcaaac
actgctgtgatcgtgatggtggtcctcgttctcctactgactagcgctgccacgggcgtc
tggctggtgaagaaatacgtctgtggagggaggttccttgtgcaccggtactctgtgatg
agggaacatgcagaggccaatgggttagaggaagcggaacatctggatgctcacacaatg
gaatctgggaagacacattaccatgatgattcagatcaggacctgttagaataa

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