KEGG   Gadus morhua (Atlantic cod): 115557393
Entry
115557393         CDS       T10832                                 
Symbol
rrp9
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2 isoform X1
  KO
K14793  ribosomal RNA-processing protein 9
Organism
gmh  Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:gmh03009]
    115557393 (rrp9)
Ribosome biogenesis [BR:gmh03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    115557393 (rrp9)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_EML Beta-prop_CAF1B_HIR1 EIF3I WDR55 NBCH_WD40 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_SCAP Beta-prop_IP5PC_F ANAPC4_WD40 Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_SPT8 Beta-prop_HPS5 Beta-prop_DCAF4 Beta-prop_DCAF12 Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_WDR75_2nd Beta-prop_WDR19_1st WDR54 PEP5_VPS11_N WD40_like Beta-prop_BBS7
Other DBs
NCBI-GeneID: 115557393
NCBI-ProteinID: XP_030231030
Ensembl: ENSGMOG00000016148
LinkDB
Position
13:8602201..8606955
AA seq 484 aa
MASTFFIKNNGDSAFPKKGHSLATSKRKNDEDLGGNSKGRAKKPNSKHNEEISSESETES
TAEQNEREGEDEFDETPQEKKLRLAKVYLDQLREEEEKKAEQVSFETELVAGRLQEELLE
QKGKLQRCIAKDLLAPDASEIRVLRGHQLPVTCLVISPDEKFIFSGSKDCSIIKWDIETG
KKLHTIKGGRKGTEARHGGHTTQVLCMAISSDGKYLASGDMNRAIIIWEPDTCKQLYKLK
GHRGAVSALSFRTGSHDLYSGSHDRSVKVWNVDENAYVETLFGHQDAITGLDCLSRERCV
TAGGRDNTVRVWKITEESQLVFHGHGGSIDCIQLINEEHMITGSDDGSVSVWSVNKKKPL
STVKVAHGSFGEAGLEQPHWVASVAALQNSDTVASGASGCSDNSEVHVWACGQGFRSLQP
LFSVPVPGFINSLEFSTSGKFLVAGVGQEHRLGRWWRQKEAKNGIYIIPLKRRSAQQEEP
PATE
NT seq 1455 nt   +upstreamnt  +downstreamnt
atggcgtctacgttctttattaagaacaacggggactcggcctttccaaagaaaggacac
agtttagcgacgtctaaacgcaagaacgatgaagatcttggaggtaatagcaaaggtcgg
gcgaagaaacccaactcaaaacacaacgaagagatttccagtgaatctgagacagaaagc
actgcagagcaaaacgaaagagaaggggaggacgaattcgatgaaaccccacaagaaaaa
aagctcagattggcgaaggtgtatcttgatcaactgagggaagaagaggagaaaaaggcg
gagcaagtatcgtttgagactgaattggttgctgggaggctacaagaggagcttcttgaa
cagaaaggaaaacttcagcggtgtatagccaaagatctcttggcaccagacgcctctgag
atccgtgtgttaagaggacatcaactcccagtcacttgtctggttatctcgcctgacgaa
aagttcatcttttctggttctaaagactgctccataatcaaatgggacattgagactgga
aagaagctgcacacaataaaggggggaaggaaggggacggaggctcgccatggaggccac
accacgcaagtcctgtgcatggctatctcctcggatggaaagtacctggccagtggagac
atgaacagagcaatcataatctgggagccagacacgtgtaaacaactatataaactcaaa
gggcacagaggcgccgtctcggccctttccttcagaacgggaagccacgatctctacagc
ggttcccacgaccgctccgtcaaggtgtggaacgtggacgaaaacgcctacgtggagacc
ctcttcgggcaccaggacgccatcacgggtctggactgtctgagccgggagcgctgcgtg
acggcggggggtcgggacaacaccgtgagggtctggaagatcacagaggagtcccagctg
gtgttccacggccacgggggatcaatcgactgcatccagttgatcaacgaggagcatatg
atcacaggatcagatgacggctctgtgtccgtgtggagcgtgaacaagaagaagcccctc
agcacggtgaaggtggcccacgggagcttcggcgaagcgggcctggagcagccccactgg
gtggcctctgtggcggcgctgcagaactcggacaccgtagcctcaggtgcctcaggctgt
tctgacaactctgaggtccacgtgtgggcgtgcggccagggcttccgctccctgcagcct
ctcttcagtgtgccagtgcctggatttatcaacagcctggagttttccacctctggaaag
ttcctggtggcgggcgtcggacaagagcacaggctgggccgatggtggagacagaaggag
gcgaagaacggcatctatatcattcccctgaagagacggagcgcgcagcaagaagagccc
cctgctacagaataa

DBGET integrated database retrieval system