Gadus morhua (Atlantic cod): 115557427 Help Entry 115557427         CDS       T10832                                  Symbol crocc Name (RefSeq) rootletin isoform X1   KO K16469   rootletin Organism gmh  Gadus morhua (Atlantic cod) Brite KEGG Orthology (KO) [BR:gmh00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:gmh03037]     115557427 (crocc) Cilium and associated proteins [BR:gmh03037]  Primary cilia and associated proteins   Other primary cilia associated proteins    115557427 (crocc) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Rootletin CCDC39 Rod_CreS FKBP15 Motif Other DBs NCBI-GeneID:  115557427 NCBI-ProteinID:  XP_030231111 LinkDB All DBs Position 13:complement(7818088..7845936) Genome browser AA seq 2026 aa AA seqDB search MSSTDNSDADSKLVSVIQRLEESVLSEEKRLTVRGPSPDALATCLPARVREIVTKNLSEG SAGAMSSVMSLQEENRVLQAELGRVEDLLANSRADRDELAIKYGAISERLEQALCLDTGD AGSESGSVAQQNVDLRRRLDDEQAAYKRKLAAYQEGQQRQAQLVQKLQAKVLQYKRKCGD LEHALQERSAELEQHASRDNGSGQHEDDGGGNLEDALIRLEEEHQRSSSLSSVNAMLREQ LEQAGLANEALSQDIRRLTADWTKAREELDQKETDWRREEESFHSYFNSEHSRLLLLWRQ VVGFRRHVCELKSNTERDLSDMRNELARVSQATQASCAGLSSTLHRRQDSAALALERDAT LRDQLELQLGERLAEFTGLQTRTEQLNIRFSDSVRERERLKAQVEEKERELAALSRRLEE QLGHSEADMQTMRAQTEVLVDTLRDIAQSVLSEGESSSEADQDNSGEILLSLLRGSSVLR SMSPRRTSSPSRTATTTSTSPTSPSMTLLPEAGLSALRSAAASRQLQLQEARGRLTSAQA SALQLRRQLADAEAGRKDLELRNQALQGERDTATRERETGQRERDRLKLERDALASGKGN LELVAQAAQSSSHILQMDYEKLQLSVASAQRERDHEREEREAALQERDRAKAETHRTQRQ LEQCESRASVQRGELSTVREACQQGEVERQLLEGEKAQMSEALTRAESRNGDLSLMLHKL QSEEAGLRDSLAKMSNINEGLAHDKTDLNNLVMQLEEDKALLQTQRREAEQEKLTLRDEL VRLEQDRLELDSTQGVLQRSLQDAEHGRASVDTELHGLRAERLKLQDKVTQLCGEVSALG SELSLARGEGQRQEVALVEVGRGRADLARERAALVVQLTASERENAVLSEELTAFRSERE ALETSLFEVQQQLAQLESRREQLEAENQNVSLRCETVTAELRRVRSEGETALAQSERERQ TLSLALSTARREAQTALCSAMSDHQEELERLASEKEALRHSLQTESQELLRTHRQEEEEQ LLQAEREREALRDEARSLQRDRDLSLLQAETEKQQALSLKEAEKAVLADKVSALQAELTA AVRDTERTSREAALYKEQEQARVGVLTGELQDLRSQLEDARGAHERQLQSLGEARADLQS RSDAALRELEQWRASLSTSQESRDQVKRELLETERQLSQSRDTTEGLRREGAELRRSLSD LTKEKETLSQSNTTLREAVRGAESERIGVKRQCEEQAQRVTVLEESFSSAQLEVSDLRGV LREVERSRLEARRELQEQRRQVKVLDGEREQRVKEVNELQSRLSLEEQRDEERGKENFLL KQKLSEAESARNSLKKELSAVQRRALDSESGWRGCERELTAQLQEARGCEKKLQDEARNL CLRAQAAQESASQAGLQLSEAQGRLAATEAELTRAEAGRRDLEFRLGSLQSALTRTLGIG AGRRVSGGGGGGGGRGRSPGGSSPGSSTISRHSSVSPLRSSLSPRKELTPDNTLGLVPIS PQGGDPPLAAPPLAVPLPELDPETLRGRLRDFLQELREAQRERDEAQGQLGALQREVEQA IGDRDGAQRQLAQLQSTLQECQEGRRTADGRLSSTQTLLRQQEEAGRRGERERRALADRA KELERALQALEADKKHTQDQLSKQRAAEVRVEAERRRLREALEAAEARATRLELGRRSLE GELQRLRLSLADQEAGGQGRQEQQDALVQQVAEADCRVASLQREVERLNQALLKVQEGEG LLKERNQSLSQSLQEVSVSHSATQGRLVTLQKSLSTSEQEKRQLQERVDEARVSLAEGRR SLASLGELTESLKSELSQSELRRELLETELATTQEALRQRTAGLAEAQRGAQAALTERTA AEERLRALQRAVAMLETEKRDAERQAVRLEKDKNALRCTLDKVERQKLKTEEGRMRLSAE KSRLDRSLSSIEEELQAAQQQVLLLQTQLSETEPVPGVCEGCGRQQAEADRLRTSYREVE RALAVRERAHRHRVKGLEEQVATLKEQLQQEMKTRQPGLSSVSGGR NT seq 6081 nt NT seq  +upstreamnt  +downstreamnt atgagctccacggacaattcggacgcggattccaaattagtttctgtaatacagcgactg gaggagagcgttctctccgaggagaagaggctgacggtgcgagggccctccccagacgcc ctcgctacatgtctgcccgctcgcgtccgagaaatcgtcaccaagaacctcagcgagggc tcagcaggagcgatgtcctccgtcatgtccctgcaggaggagaaccgggtgctgcaggcg gagctgggccgggtggaggacctgttggccaacagcagggccgaccgcgacgagctcgcc atcaagtatggcgccataagcgagcggctggagcaggcgctgtgcctcgacacgggggac gcgggcagcgagagcggcagcgtggcgcagcagaacgtggacctgcggcggcgcctggac gacgagcaggcggcgtacaaacgcaagctggcggcctatcaggagggccagcagaggcag gcgcagctggtgcagaaactgcaagccaaggtgctccagtacaagaggaagtgtggggat ctggagcacgcgttacaggagaggagcgctgagctggagcagcacgcctccagggacaac ggttcaggtcaacacgaggatgacggcggcggcaatctggaggacgctttgattagactg gaggaggaacatcagaggagcagcagcctgtcctcggtgaacgccatgctgagggagcag ctagagcaggcggggctggccaacgaggccctcagtcaagacatacgcagactcactgcg gattggaccaaggcccgggaggaactggaccaaaaggagactgattggaggagagaggaa gagtccttccacagctacttcaatagcgagcacagtcgcctgctgctgctatggcgacag gtggtcggcttccggaggcacgtctgtgagctgaagagcaacaccgagagggacctgtct gacatgcgtaacgagctggcccgggtctcccaggccacacaggcgtcctgcgcgggcctg tccagcacgctgcaccgccggcaggacagcgccgccctggccctggagcgcgacgcgacg ctgcgggaccagctggagctgcagctcggagagcggctggccgagttcaccggcctccag accagaacggagcagctcaacatcaggttttcggactcggtgcgagagagggagcgactc aaagctcaggtggaagagaaagagcgagagctggcggccctgagccggaggctggaggag cagcttggccacagcgaggcagacatgcagaccatgagggcgcagacggaggtgctggtc gacaccctgcgggacatcgcccagtccgtcctgtcagagggggagtcctcttcagaggcg gaccaggacaactcgggggagattctgctgtctctgctccgtggatcctctgttctccgc tccatgtcccctcgccgcacctcctctccgtcccgcactgccaccaccacctccacctcc cccacctccccctccatgaccctgctcccagaggccggcctgtctgccctgcgctccgcc gcggccagcagacagctccagctgcaggaggccagagggcgcctgacctcggcccaggcg tcggccctgcagctccgccggcagctggccgacgccgaggccggtcggaaggacctggag ctgaggaaccaggccctgcagggcgagagagacacggcgaccagggagagggagaccggg cagagggagagggaccgcctgaagctggagagagacgcgctcgcaagtgggaaggggaac ctggagctggtggcccaggcggcccagagcagctcacacatactgcagatggactacgag aagctgcagctgtctgtggcgtccgcccagcgagagagggaccacgagagggaggagaga gaggcggcccttcaggagagggaccgggccaaggcagagacccataggactcagcgacag ctggagcagtgcgagagccgggcctctgtccagcggggcgagctgtccacagtgcgggag gcctgccagcagggggaggtagagagacagctgctggagggagagaaggcccagatgtcg gaggccctgacccgggccgagagcaggaacggcgacctgtcactcatgctacacaagctc cagtcagaggaggcgggtcttagggactccttggccaagatgagcaatatcaacgagggc ctggcacacgacaagaccgacctcaacaacctcgtcatgcagctggaggaggacaaggct ctgctgcagacccagaggcgggaggcggagcaggagaagctgaccctgcgcgacgagctg gtgcggctggagcaggaccgcctggagctggactccacccagggggtcctgcagcggtcc ctgcaggacgcggagcacggcagggcgtcggtggacacggagctccacggcctccgcgcc gagaggctcaagctgcaggacaaagtcacccagctgtgtggcgaggtgagtgctctgggg tccgagctcagcctggcccgaggggagggccagcgacaggaggtggccctggtggaggtg ggccgcggccgggcagacctagcccgcgagagggccgccctggtggtccagctgaccgcc tccgagagggagaacgccgtgctgtccgaggagctgactgccttcaggtcagagcgcgag gccctggagaccagcctgttcgaggtgcagcagcagctggctcagctggagtctcgccgg gagcagctggaagcggagaaccagaacgtcagtctgcgctgtgagacggtgacagccgag ctgaggcgagtgcgctcggagggggagaccgccctggcccagagtgagagggagcggcag accctctccctggccttgagcaccgcccggcgagaggcccagactgccctgtgcagcgcc atgtccgaccaccaggaggagctggagcgactggcctcagagaaggaggccctgcgtcac agcctgcagacggagagccaggagctcctgaggacgcaccggcaggaggaggaggagcag ctcctccaagccgagagggagcgggaggcgctgagggacgaggcccggagcctgcagcgc gaccgggacctgagcctcctgcaggccgagacggagaaacagcaggctctgtccttgaag gaggcggagaaggcggtgctggctgacaaggtgtccgccctgcaggctgagctgacagcg gctgtccgtgacacagagaggacgagcagggaagcagctctctacaaggagcaggagcag gcccgcgtgggggtcttgactggggagctgcaggacctgcgctcccagctggaggacgcc aggggggcccatgagcggcagctccagagcctgggggaggcccgcgcagacctgcagtcc cgctccgacgcggctctgagagagttggagcagtggagagcctctctgtccaccagtcag gagagtcgtgaccaggtgaagagggagctgctggagacggagcggcagctcagccaatca cgcgacacgacggagggcctccggagggagggggcggagcttagacgcagcctaagtgac ctcaccaaggagaaggagaccctgagccaatcgaataccacgctgagggaagctgtgagg ggcgcggagagcgagaggatcggggtgaagcggcagtgcgaggagcaggcccagcgcgtc acggtgctggaggagagcttctcctcggcccagctggaggtcagcgacctgcgcggcgtc ctgcgggaggtggagcgctcccgcctggaggcccgcagggagctgcaggagcagaggaga caggtgaaggtgctggacggggagcgggagcagagggtgaaggaggtgaacgagctccag tcccgcctgtcgctggaggagcagagggacgaggagcgcgggaaggagaacttcctcctc aagcagaagctttccgaagccgaaagcgccaggaactcactgaagaaagagctctcagcg gtgcagcggcgcgcgctggactctgagtcgggctggcggggctgcgagcgggagctgacg gcccagctgcaggaggcgcgcggctgcgagaagaagctccaggacgaggcccgcaacctg tgcctgcgcgcccaggcggcccaggagagcgccagccaggcgggcctccagctaagcgag gcccagggccggctggccgccacggaggccgagctgacccgggccgaggccggccgccgg gacctggagttccgcctgggcagcctgcagtcggcgctgacccggacgctgggcatcggc gcggggaggcgggtcagcggaggaggaggaggaggaggagggaggggtaggagccctggc gggagctctccgggctccagcaccatctcccgccactccagcgtgtcgccgctgcgctcc tcgctgtccccgcgcaaagagctgacccctgacaacactcttggcctggttcccatctcc cctcaagggggggacccccccctggccgccccccccctggccgtcccactgccggagctg gaccccgagaccctccgaggccgcctcagagacttcctccaggagctccgcgaggcgcag agggaacgggacgaggcccagggccagctgggggccctgcagagggaggtggagcaggcg atcggggacagagatggggcccagagacaactcgcccagctgcagagcaccctgcaggag tgccaagaagggaggcggacggcggacggccgtctgagctccacccagaccctgctgcgg cagcaggaggaggcggggcggcggggggagagggagaggcgggccctcgccgaccgagcc aaggagctggagcgggccctgcaggccctggaggcggacaagaagcacacacaggaccag ctcagcaagcagcgtgcggcggaggtgcgcgtggaggcggagcggcggcggctgcgggag gccctggaggcggcggaggcgcgggccacccggctggagctgggacggcgcagcctggag ggggagctgcagaggctgaggctcagcctggccgaccaggaggccgggggccagggccgc caggagcagcaggacgccctggtccaacaggtcgccgaggcggactgccgcgtggccagc ctccagcgagaggtggagaggctgaatcaggctctgctcaaggtgcaggagggcgagggc ctgctgaaggagaggaaccagagcctcagccagagccttcaggaggtgtcggtcagtcac agcgccacccaggggcgcctggtcacactgcagaagagcctgagcacgtcggagcaggag aagaggcagctacaggagcgtgtggacgaggccagggtctccttggcggaggggcggagg agcttggctagtctgggggagctcacggagagcctgaagagcgagctgagccagagcgag ctgcggcgcgagctcctggagacggagctggccaccacacaggaggccctgcggcagcgc acggcgggcctggcggaggcccagcgcggggcccaggccgccctgacggagcgcacggcg gcggaggagaggctgcgggcgctgcagagggcggtggccatgctggagacggagaagagg gacgcggagagacaggcggtgcggctggagaaggacaagaacgccctgcgctgcacgctg gataaggtggagcggcagaagctgaagacggaggagggccgcatgcgcctctcggcggag aagagccgtctggaccgctccctgagctccatcgaggaggagctgcaggccgcccagcag caggtcctcctgctgcagactcagctgtcggagacggagccggtcccgggtgtgtgtgag ggctgtgggaggcagcaggctgaggcggaccgcctgaggaccagctacagagaggtggag cgggccctggcggtccgcgagagagcccaccggcacagggtcaaaggtctggaggaacag gtggcaacactaaaggagcagctgcagcaggagatgaagactcgacagcctggtctctcc tctgtctctggtggacgctag

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