Gadus morhua (Atlantic cod): 115557474
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Entry
115557474 CDS
T10832
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 1-like
KO
K05034
solute carrier family 6 (neurotransmitter transporter, GABA) member 1
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
115557474
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gmh02000
]
115557474
Transporters [BR:
gmh02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
115557474
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
115557474
NCBI-ProteinID:
XP_030231195
Ensembl:
ENSGMOG00000003780
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Position
13:20185405..20199703
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AA seq
606 aa
AA seq
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MATNGTKASDGLVLTEAVIDAPATTNDKPKTLVVKVQKTKKDLPERETWGGKFDFLLSCV
GYAIGLGNVWRFPYLCGKNGGGAFLIPYFLTLIFAGMPLFLLETALGQYTSVGGLGVWKM
APLFKGVGLAAAVLSFWLNIYYIVIISWAIYYLWNSFTSELPWQSCGNAWNTERCYTNYS
TPDTTNLTSAVQEFWERNMHQLTEGLEKPGELRVPLAITLAIAWVLVYFCIWKGVSWTGK
VVYFSATYPYIMLFILFCRGVTLPGAFDGIAFYITPNFEKLKESEVWLDAATQIFFSYGL
GLGSLIALGSYNPFNNNVYRDSIIVCCINSFTSMFAGLVIFSIVGFMANVTKRPIADVAA
SGPGLAFLAYPEAVTQLPISPLWAILFFSMLLMLGIDSQFCTVEGFITALVDEFPHLLRK
RREIFIAIVCLVSYIIGLSNITQGGLYVFKLFDYYSASGMCLLFLVFFECISISWFYGVN
KFYDNIEEMIGYKPCMWWKLCWVVFTPLIVAGVFLFSAVQMVPLTMGDYVFPAWGQGVGW
CMALSSMLLIPGYMGYMFLTLKGTYKERLRMMVKPVVLLRGKVTGGETPTAADTQSQNPA
NEEAYI
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccaacggaaccaaagcctcggacggactagtcctcactgaggcagtgatcgac
gcgcccgccaccaccaacgacaaacccaagaccttggtggtcaaagtccagaagaccaaa
aaggatcttcccgagagagaaacctggggaggaaaatttgactttctcctctcgtgtgtg
ggatatgccattggactcgggaatgtctggagatttccttatttatgtgggaaaaacggt
ggaggggccttcttgatcccctactttctgaccctaatattcgccggtatgcccctgttc
ctcctcgagacggcgctgggccagtacacgtctgttggaggtctcggggtctggaaaatg
gcccccttgttcaaaggtgtcggtttggccgcggcggtgctctccttctggctcaacatc
tattacattgtcatcatttcctgggctatttattatctgtggaactcgttcacctctgag
ctgccgtggcagtcttgtggcaatgcctggaacacggagcgctgctacaccaactacagc
acacctgacaccaccaacctgaccagcgccgtgcaggagttctgggagcgtaacatgcac
cagctgaccgagggcctggagaagcccggggagttgagggtgcccctggccatcaccctg
gccatcgcatgggtgctggtgtacttctgcatctggaagggcgtcagctggactggcaaa
gtggtgtacttctcggcgacctacccctacatcatgctgttcatcctgttctgccgcggg
gtcactctgcctggagccttcgacggaatcgccttctacatcactcccaactttgagaag
ctcaaggagtccgaggtgtggctggatgccgccactcagatcttcttctcctacggtctg
ggcttgggttctctgatcgcgctaggcagctacaaccccttcaacaacaacgtgtacaga
gattcgatcattgtgtgctgtatcaactccttcaccagcatgttcgctggccttgtcatc
ttctctattgtgggcttcatggcgaacgtaacaaagaggcccattgctgatgtggcagcc
tcaggaccgggtctggccttcctggcctatcctgaggcggtcacccagctgcccatctcg
cccctctgggccatcctcttcttctccatgctgctcatgctggggatagacagtcagttc
tgcacagtggagggattcatcactgcgctggtggatgagttcccacatcttctcaggaaa
cgccgggagatcttcattgctattgtctgcctcgtctcctacatcatcggcctgtctaat
atcacacagggtggcttgtatgtgtttaagctcttcgattactactcagccagtggaatg
tgcctgctgttcctggtgttcttcgagtgcatctccatttcctggttctatggagtcaat
aagttctatgacaacatcgaggaaatgattggctacaagccctgcatgtggtggaagtta
tgctgggtggtgtttactcctcttattgtggctggagtgttcctgttcagcgcggtgcag
atggttcccctcaccatgggcgactacgtgttccctgcctggggtcagggcgtgggctgg
tgcatggccctctcctccatgctgctcattcctggctacatgggatacatgttcctcacg
ctgaagggcacatacaaagagcgtttgcggatgatggtgaagccagtggttctgctgagg
ggtaaggtgaccggaggggagacaccgaccgcggccgatacccagagtcagaacccggcc
aacgaagaagcctacatctag
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