Gadus morhua (Atlantic cod): 115557496
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Entry
115557496 CDS
T10832
Name
(RefSeq) retinoic acid-induced protein 1-like
KO
K19749
retinoic acid-induced protein 1
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmh03000
]
115557496
Transcription factors [BR:
gmh03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
115557496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
115557496
NCBI-ProteinID:
XP_030231231
LinkDB
All DBs
Position
2:15400199..15414840
Genome browser
AA seq
2275 aa
AA seq
DB search
MQSFSERSGGYHTNPGCYQPEPQELSRLETYRQHPHHPHPQHPHPGPGPHPGPGTGQQQH
TRPGYEAHPLATPTGMPSSGAPGSGGAQKDCYSQQTYPGYPGNSAGNGGGNVGSVPPQAK
KPYRGSKVPPPPPSQHLQGPSGYSNHLGPGSYSAQYMAEGQIQQKWEDPGQLTQYEQELV
GRMEPGVPPTPGSSQYMEQNMLGHSQGQCHQPSNPVYTSPHHQTHPSNPAPSSLMYPQSH
LHYPQHSPSPSPYMEKCSPMPHCYKGYNMPSNSQYSRQMSSHPSLKQAGYRPSQNSYGYQ
QPPSRVYESQPPLQAMPSTQESHSKYYGQPQQNYCLSELSVRSPEQYYQTCSPSSSHSPA
RSVGRSPSYSSTPSPLMTNPESFQYGQPPMTPGAASSSSSSSAAMQDQGSSATMLMPPRS
HPSPNVPQVASQSYTTTSQGPTMKERFSEKLLSNPSLWSLNALTSQVENISNNVQQLLLS
EALVANKKGSKRSSGGSNSSVGSVGSSKKGEDYKSLTYPDGGGVGGVGGGPMQDSYSTPQ
QQPLPMELHEGGYSSSSDEQLERGYYYCSQGRSPAQPPNNTQLSHDTGSSCSMTSPDDMS
TRSGDSGLQNLTPDPRYQSGQGSDGISTPAKSVGDDRSPTCMSIHSPLKQERDSPPDIQR
ISEHVKENFEESAWTEKQAEEEEVTLQQTPDLKDSSVDEKLDKWSEDEKGPALFTKINKG
MTEKSFCYDETVYQGIQHKYDPDSRDFVEQSPAALSDSGQKGQIERDMKLDAFKSESPTA
SESSLKTSPFISRGDLERNQYYTEKDDSSESNSLSPNGEALDGVNEEKKESRDEDVVEDE
ANEGGQEEQPQLQQHLSPPVSAEVSDDMEEGRVMSQPSTEGNIHYREGPEVPYGDACSRS
KLTDTHTDADPMGTATHRDSASTAVTATDVSERETAIGDTVPQPQSAMPVFSVLNDNAQS
RDHIDHSDSRVLEPDSPQLPGKSILPPAPSWADTPPSPKKGDEDMEPGISCPSAVTPSAK
AEPVTPSAQPRAFGRKHARSRRVMQSGVGIRRQLSLEREEEKEDEAAPLPEKKLCIAPSK
TVLFSDQMDLAHQESILSQTPKSLAEGFRSRMCTRSFNAPDIATKIEPNAKRKPGPKPCL
KPESKLGPKSGAKTGAKAGSKSGPKPSAKPRTKPGPKPGPKLAQEPVFKPEPIPPDLSLE
VESPVKKKTGPKPGSKTGSKPALKLGTKLGPKPLLNSAEALPPNDAVTIKATVGRPKGSV
SKAKIIQKEEVTLPSNGKNNLKATMLPTNLDRNASKQDNDNTKVLGKDTKNMVLRSRKPA
IEKPLKEKVTVLEEHIVAQGQTEIKTSDSLNIEELNSIEQNLESFIPMADENNKNILIST
PGQLTPPHHDTVPDERMLACLKRKACPEPPSTAIKKKRGPKPKPKPPQFESTILELAPNE
PKVKVVRGSKRKRGPPKKTLSLNIPQTKEITPPLVDSDTIIDVPPVVPQCRTKTKVLPPR
KGRGQKYEAMVQKISSPSSKKHYLMAHIESTLIEDPTSKVSSQHGLGESEMLAIDSTETS
LIDVNKMVEGPLKTSEVSHKNFSEKEVGVDKEITQKEERQELKRDESTSEGIRQDVRNVL
LIPEELRPEELRPDNSDPEEKCGEEQIESQGILVNEVSDRVWGSADTGAQREWLQEPSAG
VPALATKPARTKRKRWALVESTDASVINMEAGSLIVTTQRLAKQRAIKNNHEMHLKQKRK
RRKGQASAEDGEEVEETSAEVVDPPPPPPPTEEEREIKAVPKPTEPFVPVPIGPDTMITP
SEVTTTEPLKKPKRGRKPWANPSHKKRGKAPPEPISSKPGKVHKKPGPKPGMKDAMEVIE
AVVRAAECEQTEKEEREKLEKEKREKVTRETEEEGKTHQCIAGPGPVVTVSERRTENISM
KRIRRKPVQEEINPCFHPHVRINNSRDFSSWCAIINSLEEATPIIRFKKKRLAKMKNPIT
AAKVVPHSMAMLQGPLVNRTLIDRCLTCCLCGNSSNYRDLGDLCGPYYTEDSMPRKILSS
RRIGGFRGVPEKTEDSSNNNNSNNNNNNNNNNNSSIAEEPSSSSTSDPDCGTEKEVSAEG
STGGGISSSRSSSAGQHHWRHRRPEGTLERSGPEVGPRRLTLRERFRRIKQLKDMERGQA
TGATSHQVAGTSGLSGVGSFQRLREEAEANEHWAHENCTIWTRGVIMVAGRLYGLTEAAR
ASTQTNCYKCQIVGASLSCCWGGCSRRYHYICAKEIGCTFHEVDFSITCPKHEDL
NT seq
6828 nt
NT seq
+upstream
nt +downstream
nt
atgcagtccttcagtgagcgcagtgggggctaccacacaaacccaggctgctaccagccg
gagcctcaggagctatcccgtctggagacctaccgacaacaccctcaccacccccatccc
cagcacccacacccaggacccggtccacaccctggcccaggcaccggacagcaacaacac
acccgccccggctacgaggctcaccccctggctacccccacgggcatgccctcctccgga
gccccaggaagtgggggagcacaaaaggactgttacagccagcagacctaccccggctat
ccaggcaacagtgctggaaatggaggtggaaatgttggctcagtgccccctcaggcaaag
aagccctacaggggaagcaaagtgcctcccccgccacccagccaacacctacagggccct
tccggctacagcaaccacctcggccccgggagttattcagcccagtatatggccgagggc
caaatccagcagaagtgggaagacccaggccagctaacccagtatgagcaggagttggtg
ggccgtatggagcccggcgtgccccctacccctggctcctcccagtacatggagcagaac
atgctgggccactcccaaggccagtgccaccagccttccaaccctgtctacacaagcccc
caccaccagacccacccctctaacccagccccttcttcactcatgtacccacagagccac
ctgcactacccacagcactccccctctccttccccatacatggagaagtgcagccctatg
ccccactgttacaaaggctacaacatgccttccaattcacagtatagcagacaaatgagt
agtcacccaagtctgaaacaggcaggctacagaccaagccaaaacagttacggctaccag
cagcctccctctagagtctatgagtcccagccaccgctacaggctatgccaagtacacag
gagtctcattctaaatactacggccaaccccagcaaaactactgtctgtcagagctgtct
gtcagatcccctgagcagtattatcaaacatgcagcccctcctctagtcactctccagca
cgctctgtaggccgttcgccatcctatagctccaccccctccccactaatgaccaatcca
gagtcttttcagtacggccaacctcccatgacccccggggcagcttcatcctcttcgtcc
tcctcagcagccatgcaggaccaaggtagcagcgccaccatgctaatgcccccacgctca
catccctccccaaacgtgccccaagtggcatcacaaagttacaccaccacctcacaaggc
cccaccatgaaggaacgattttcagagaagctgctctcgaaccccagcctgtggagcctg
aacgccctcacctctcaggttgagaacatctccaacaatgtccaacagctgctgctgtca
gaggccctggtggccaacaagaaaggcagcaagcgtagcagtggtggaagtaacagcagt
gttggcagtgtaggttcatctaagaagggggaggactataaaagcctcacatatccagat
ggtggtggcgttggtggggttggtggaggcccgatgcaagactcatactccacgcctcaa
caacagccactacccatggagttacatgaaggaggctactcaagtagcagtgatgagcaa
ctggaaaggggctactactactgcagccagggcaggagtccagcacagccacccaacaac
actcaactcagccatgacacaggctcctcatgttccatgacatccccagatgatatgtcc
accaggtctggggactctggtctccaaaaccttaccccggatcctaggtatcaatcaggg
cagggaagtgatggcataagtactccagcaaagagtgtaggggatgataggtctcctacc
tgcatgagtatccatagtcctttgaaacaagagagggactcccctccagatatacaacga
ataagtgaacatgttaaagaaaactttgaagaatcggcatggacagagaagcaggctgaa
gaagaggaagtgacactgcaacagactcccgacctaaaggacagttctgttgatgagaag
ctagacaaatggtcagaggatgagaagggtccagccctcttcactaaaatcaacaaaggc
atgacagagaaaagcttctgctatgatgagacagtgtaccaaggaattcagcataaatat
gaccctgattcaagagattttgttgagcaatctccggctgctctctctgactctggtcaa
aaaggacaaatagagcgagatatgaaattggacgccttcaagtctgagtccccaactgca
tcagagagctcgctgaaaacatccccattcatttcaaggggtgaccttgaaaggaatcaa
tactacacagagaaggatgacagttcggaaagcaactcgctatctcccaatggcgaggcc
ttggatggagtcaacgaagaaaagaaagagagcagagatgaggacgtggttgaagatgag
gccaatgagggaggacaggaggaacaaccacagctgcagcaacatctttcccctcctgtt
tcggcagaggttagtgacgacatggaggaggggagggtcatgagccagccatcgactgag
ggaaacatacattatcgcgaggggccagaggtaccttatggcgatgcctgcagcaggtca
aagctcactgatacccacactgatgcagaccctatggggacagctacccaccgagattca
gcatcaacagcagtaacagcaacggatgtttcggaaagagagacagctatcggtgacact
gttcctcaacctcagtctgcaatgcctgttttctcggttctaaatgacaatgcacaaagc
agggatcatattgaccacagcgattccagggttctggagcctgactccccccagctgcct
gggaagtcaatccttccaccagccccctcctgggcagacactccaccttccccgaagaaa
ggggatgaagacatggaaccaggcatcagctgccccagtgctgtgaccccctccgccaag
gccgagcccgtcaccccatctgcccagccacgggcattcggacgtaaacatgccaggagc
agaagagtcatgcagtcaggggttggaatcagacgccagctgagcttggagagagaagag
gagaaggaggatgaagcagctcccttgccggaaaaaaaactctgcatagccccgagcaaa
actgttttgttctcagatcaaatggacttagcgcaccaagaatctattttgagccagaca
cccaaatcattagctgaaggcttccgttctagaatgtgcactcgctcctttaatgcacca
gatattgccacaaaaattgagcccaacgcaaagagaaaaccagggcctaaaccatgttta
aaaccagagtccaaactaggtccaaaatcaggagcaaagacaggagccaaagcaggatca
aagtcaggtcctaaaccttctgcaaagcctagaactaaaccaggaccaaagcctggtcct
aaacttgctcaagaacctgtattcaaacctgagccaattccacccgatctgtcccttgaa
gtagagtcaccagttaaaaaaaaaacagggcccaaacctgggtctaaaactggatccaaa
ccagcactaaagcttggtacaaaactgggccctaaaccgctactgaattcagcagaggct
ttaccccctaatgatgctgtaacaattaaggctacagtgggtcgtcctaagggctctgta
tctaaggcaaagataatacaaaaggaagaagtgacactgccatctaatggcaaaaataat
cttaaagcgaccatgcttccaacaaacctggatagaaatgcatctaaacaagacaatgat
aacacaaaagttttagggaaagatactaaaaatatggttttaagatccagaaagcctgcc
atagaaaaacctttaaaggagaaagtaacagttctagaggaacacattgttgcacaaggt
cagacagaaataaaaaccagtgattcgcttaacattgaagagctcaacagtattgaacag
aatctggaatctttcatccccatggcagatgaaaacaacaaaaatatcttaatatctaca
cctggccagctcactccacctcaccacgatactgtgcctgatgaaagaatgctagcttgt
ctaaaaagaaaagcctgccctgaacccccctcaacggcgatcaagaaaaagagaggccca
aaacccaaaccaaaaccaccacaatttgaatccaccatattggaactggctccaaatgaa
cccaaggtaaaggttgtcagggggtctaaaagaaagcgagggccgccgaagaaaaccttg
agtttgaatattccccagaccaaagaaataactccacctttagttgacagtgacaccata
attgacgtgcccccagtggttccccaatgccgaacaaagacaaaggtcctaccgccacgc
aaaggtaggggccagaaatatgaggcaatggtgcagaaaatttcttctcccagctctaag
aaacactatctaatggcacatatcgaaagcactcttattgaggatccaacatccaaggtc
tcgtctcaacatggcttgggagagagtgagatgttggcaatagacagcacagagacgtct
ctgatagatgttaataagatggttgaaggaccgttgaaaaccagtgaagtgagtcacaag
aatttcagtgaaaaggaggttggagtagataaagaaataactcagaaagaggagaggcaa
gagttaaaacgggatgagtccacatctgagggtataagacaagatgtgagaaatgtgttg
ttgataccggaggaattgagaccggaggaattgagaccggataattctgacccagaagag
aagtgtggggaggaacaaatagagagtcaagggatactagttaacgaggtgagtgacagg
gtttggggctcagcagacacaggggcccagagagagtggctgcaggagccctcagcgggg
gtacccgcgttagccaccaagcctgccagaaccaagaggaagagatgggctttggtggaa
agcacagacgcctctgtgataaacatggaagccgggagcctaatagtcactacgcagcgc
ctggcgaaacagagagccattaagaacaaccacgagatgcacctgaagcagaagaggaag
cgcaggaaaggccaggcctcggcggaggacggggaggaagtggaggagacaagtgctgag
gttgtagatccaccacccccaccaccacccacagaggaggagagagaaataaaggcagtg
ccaaaacctacagagccctttgttccggttccaattggccccgatacgatgatcacaccc
agcgaggtcaccaccacagagcccctcaaaaagcccaagagaggaaggaaaccctgggca
aaccccagccacaagaaacgagggaaggccccaccagagcctatctccagtaagcctggg
aaggtccacaaaaagccagggccaaagccaggcatgaaagacgccatggaagtaattgaa
gcagtggtgagggcggccgaatgtgaacagacagaaaaagaggagagagagaaactagaa
aaagaaaagagggaaaaggtaacgagggaaactgaggaggagggaaaaacccaccaatgt
atcgcaggtcctggacctgtagtaacagtatccgaaagacgaacagagaatatttcaatg
aaaaggatcaggcgtaaacctgtacaagaggaaattaacccctgcttccatccacacgtg
cgtatcaacaactctagagatttttcctcttggtgtgcaatcattaatagcctcgaggaa
gcaacgcctattatacgatttaagaaaaagcgcctggctaaaatgaagaatcccatcacg
gcggcaaaagtagttccacacagcatggcaatgctccaaggtccattagtgaacaggacc
ctcatcgacaggtgtcttacatgttgcctgtgcggaaattcatcaaattacagagacctg
ggggatctatgtggcccatactacacggaggacagcatgccacgtaaaatcctctcaagc
agacgcataggagggttcaggggagtcccggagaagaccgaggacagtagcaacaacaac
aatagcaacaacaacaacaacaacaacaacaacaacaacagcagcatcgctgaggaaccg
tccagctcgtctacaagtgacccagactgtggcactgagaaggaggttagcgcggaaggg
tctaccggagggggtattagcagtagccgtagtagtagcgctggacaacaccactggcgc
cacagacgtcctgagggaaccttagagagatcaggaccagaggtcggtccacggagactc
acgctccgtgagaggttcaggaggataaagcagctgaaggacatggaaagggggcaggct
acgggagcgaccagccaccaggtggccggcaccagtggtcttagtggggttgggtcattc
cagaggctacgtgaagaggcggaggccaacgagcactgggcccatgagaactgcaccatt
tggaccagaggtgtcatcatggtggccgggcgtctgtatggacttacagaggctgcgaga
gcttctacacaaacgaactgttacaagtgccagatcgtaggggcatccctcagctgctgc
tggggaggctgcagtcgcagataccactacatctgtgccaaagagataggctgcaccttc
cacgaggtcgacttctcaatcacatgtcccaaacacgaggatctgtaa
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integrated database retrieval system
