Gadus morhua (Atlantic cod): 115557712
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Entry
115557712 CDS
T10832
Name
(RefSeq) contactin-4-like
KO
K06761
contactin 3/4/5/6
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gmh04515
]
115557712
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
gmh00537
]
115557712
Cell adhesion molecules [BR:
gmh04515
]
Immunoglobulin superfamily
Contactins
115557712
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
gmh00537
]
Others
115557712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
Ig_DSCAM-DSCAML_C
V-set_CD47
Ig_C17orf99
Pur_ac_phosph_N
C2-set_2
Tissue_fac
C2-set
Herpes_gE_N
Motif
Other DBs
NCBI-GeneID:
115557712
NCBI-ProteinID:
XP_030231632
Ensembl:
ENSGMOG00000006949
LinkDB
All DBs
Position
13:21239476..21359891
Genome browser
AA seq
1032 aa
AA seq
DB search
MMLLWKLLMLHSLMGCLAERVGAAVQSPAFSKQPGSIVYPLDAVEKNREVMFSCEAQGMP
PALYRWKLNGTVLSVKSSGSHYSLSGGNLRISRLNKDHDAGTYQCLASNSFGTIVSREAS
LTFAYLENFKTHKRGSVSVREGQGVVLLCGPPPHSGDLMFSWIFNEYPSFVKQDHRRFVS
QETGNLYIAKVELSDVGNYTCVVTNTVTKTRVQGPPTPLVLRSDGVMGEYEPKIEVQFPE
LVHGAKGSTVKLECFALGNPVPSISWRRVDGVPFARKVDTRKVSGVLDLPYFQQEDAGTY
ECVAENSRGLNTVKGKLSFYAQPHLIEKPQDVQKSIDDSLVWECKATGKPKPSYRWMKNG
ENLEPTEERVQVANGALSISRLTLADVGMYQCVAGNKHGEVYSNAELRVIAVAPDFGSTP
VRSQTLVKEGGDVLIECKPKMSPWGIISWKKTAEPLRESNRVSILENGNLRIWNATKVDA
GVYTCLATNQFGVASSFGSVTVKEPTVIVTQPSTMDVTVGESVILPCQVTYDPSLELKFT
WFFNEQLIHFANHGGYFEKVGGQHSAGDIMIRNVQLKHAGKYTCAVQTKVDSISIAADLV
VRGPPGPPNGIHVSEVSETTVSLSWRPGSDNHSPITAYTIQARTPFSLGWQAVTTVPESV
GGRQLTATVTELNPWVEYEFRVLGSNAVGTGEPSKPSKQARTKETSPRVTPANVSGGGGS
RSELVITWEPVPEELQNGPGFGYVVAFRPHGATGWMQAAVPSPEASRYVFKNESIQPFSP
FHVKVGVYNNVGEGPFGPVSTIYSAEDEPGRAPTRVRAKSLSASQVEVSWKALPWNVSKR
RLLGYELRYWPRSEKEESASVQRTVGNQTSSVLRGLRGSTYYYITVRAYNTAGTGPPGGT
VNVTTKKPPPSQPPAKVMWNTSNSKIIVNWEQVKALENESEVTGYKVLYKRNRHSPANVM
ETNTTSVELSLPTDEEYIIQIKPFGEGGEGSSSRQITIPRIAGPNAIGSASKVSTLSALS
TIALSFTARTSL
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgatgttgctatggaaactactcatgctgcactcacttatgggctgcctcgcagagagg
gttggtgccgccgtgcagagtccggcgttcagcaagcagccgggcagcatcgtgtacccc
ctggacgccgtggagaagaaccgggaggtgatgttcagctgtgaggcccaggggatgccc
cccgccctctaccggtggaaactgaatggcacagtactcagtgtgaaatccagcggctcc
cactacagcctttccggaggcaacctgagaatcagccgcctgaacaaggaccacgatgct
ggaacctatcagtgcctcgcctccaactcctttgggaccatcgttagccgggaggccagt
ctcacatttgcatatctagaaaacttcaagacacacaaaagaggctcagtatcggtgcgg
gaaggacaaggggtggtgctactgtgcggacctcctccacactcaggagacctgatgttc
tcctggatcttcaacgagtacccctcgttcgtgaagcaggaccaccggaggttcgtgtcc
caggagacggggaacctctacatcgccaaggtggagttgtcggacgtggggaactacacc
tgcgtggtgaccaacaccgtcacaaagacccgggtgcaggggccgcccacaccgctggtg
ctacgcagcgacggtgtgatgggcgaatatgagccaaagatagaagtgcagtttccagag
ctggtccacggggccaagggatccacggtgaagctggagtgttttgcgctgggaaaccct
gtgccctccatcagctggagacgggtggacggcgtccccttcgccaggaaggtagacacg
cggaaggtcagcggggtcctggacctgccttacttccagcaggaggacgctggcacctac
gagtgtgtggccgagaactcccggggcctcaacactgtgaaggggaagctctctttctac
gctcaacctcatctcattgagaaaccccaagacgtccagaagtccatcgacgactcgctg
gtgtgggagtgcaaggcgactgggaagcccaagccctcctataggtggatgaagaacggg
gagaacctggagcccacagaggagcgcgtgcaggtagccaacggagccctgtccatcagc
cggctgaccctggctgacgtggggatgtaccagtgtgtggcaggaaacaagcacggcgag
gtctactccaacgcagaactccgagtcatagccgttgctccggacttcggctcgaccccg
gtgaggagccagacgctggtgaaggaggggggagatgtgctcatcgagtgcaagccaaag
atgtctccttggggtatcatctcctggaagaagactgccgagccgctccgggagagtaac
agagtttccatcctggaaaacggtaatctgcggatctggaacgcgaccaaagtggatgcc
ggcgtttacacctgcctggccacgaaccagtttggtgtcgccagcagttttgggagtgtc
acagttaaagagcctacagtgattgtcacccaaccgtccaccatggatgtcacggtgggc
gagagcgtcatcctgccatgccaggtgacctatgacccctcgctggagctcaagttcacc
tggttcttcaacgagcagctcatacacttcgccaaccatggggggtactttgaaaaagtg
ggcggacagcattcggctggggacataatgattcgaaacgtgcagctgaagcatgctggg
aagtacacgtgcgccgtgcaaaccaaggtggacagcatctccatagctgccgatctggtt
gtcagaggtcctcctggcccaccaaacggcatccatgtgagtgaggtcagtgaaaccacc
gtttccctgtcctggaggcccggctccgacaaccacagccccatcacagcctacaccatc
caggcccgaacgcccttctccctgggttggcaagcagtcaccacagttccagagtcggtg
gggggtcgccagctgacagccacagtcacagagctgaacccctgggtggagtatgagttc
cgggtgctgggcagcaatgcggtgggcacgggggagcccagcaagccctccaaacaagcc
aggacaaaggagacctctccgagggtcacgcctgctaatgtgagcggtggaggcggcagt
cgctccgagttagtcatcacatgggagcccgtgccggaggagctccagaacggccccggg
ttcggctacgtggtggccttccgccctcacggcgctacgggctggatgcaggcggccgtg
ccctccccggaggcctcccgctacgtcttcaagaacgagagcatccagcccttctccccc
ttccacgtcaaggtgggcgtgtacaacaacgtgggcgagggccccttcggacccgtcagc
accatctactcagcggaggacgagccaggaagggcgcccaccagggtgcgtgccaagagc
ctgtctgcctcgcaggtggaggtctcgtggaaagccctgccctggaacgttagcaagcgg
aggcttctgggctacgagctgcgctattggcccaggagtgagaaggaggagagtgccagc
gtgcagcgcaccgtggggaaccagacgtccagcgtgctgcgcgggctgagaggcagcacg
tactactacatcaccgtcagggcgtacaacaccgccggcacgggcccgccggggggcaca
gtcaacgtcaccaccaagaaaccaccccctagccagcccccggccaaagtgatgtggaac
acgtccaactccaagatcatcgtgaactgggagcaggtcaaggccctggagaacgagtcg
gaggtcactggctataaagtgctgtacaagaggaaccgacacagccccgccaacgtcatg
gagaccaacacgacgtccgtggagctgtctctgcccaccgacgaggagtacatcatccag
atcaagcccttcggagagggaggcgagggcagcagcagcaggcagatcaccatccccagg
atagcaggtcccaatgccattggctcagcgtccaaagtctccacgctgtctgcactcagc
acaatagcgctgtcgttcacagcccggacctccttatga
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