Gadus morhua (Atlantic cod): 115557839
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Entry
115557839 CDS
T10832
Name
(RefSeq) contactin-4-like
KO
K06761
contactin 3/4/5/6
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gmh04515
]
115557839
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
gmh00537
]
115557839
Cell adhesion molecules [BR:
gmh04515
]
Immunoglobulin superfamily
Contactins
115557839
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
gmh00537
]
Others
115557839
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
Ig_DSCAM-DSCAML_C
Ig_C17orf99
Pur_ac_phosph_N
Tissue_fac
Motif
Other DBs
NCBI-GeneID:
115557839
NCBI-ProteinID:
XP_030231804
Ensembl:
ENSGMOG00000006963
LinkDB
All DBs
Position
13:21133244..21196020
Genome browser
AA seq
1049 aa
AA seq
DB search
MKLLPWELLILLSLKECLAGSVAWHRAPSSARASHAQSPRHGPVFTQEPSDSVLPLGAHD
NQAFINCKAKGNPPPRYKWRVDGREVNPAQDPSYSLVEGNLLIRDPLATQHGGVYQCIAT
NAIGTVVSKEAKIKFAFLQNFSRKLRNTVSVREGQAVVLLCGPPPHSGEIKYSWVFNAQP
RFLLQDSRRFVSQRTGNLYIAKVEASDVGNYTCVVRNTMNNATAFSSPTPVVLRTDAVMG
EYEPKIEVQFPESLHVPTGSSVKLECFALGNPVPSISWRRADGSPLAGKIQIHHSSGVLE
IPYFRPEDEGQYECVAENSRGRNVARGRLLFQNVEHLQWLQTLKDANIAIEANLQWECKA
SGKPTPTYRWLKNGQPMAPGERIHIEDGRLGIASVSLTDSGMYQCLAENEHGAIYASAEL
KVVASAPDFSWTPVKKSTLVQRGGEVVLECRPRAAPKAFISWRRGGGGELLKDTRRRAIK
EDGSLRITNTSQSDAGRYTCVAQNIFGTSSSSGSLVVKEPTRIVVPPLALDATVGQSVVL
PCEVVSDPTLEPVFKWFLNGKPIDLGHRREHFEMIGGVSAGDLMVRNVQLKHSGKYVCKV
HTVVDSVSAAADLIVRGPPGAPVDLVVSRITDTSVQLSWGSGPDNHSPITSYTLQARTPY
SIGWQTAQTVPDCVPGQMSHATVTGLKPWVEHEFRVVAINGVGVGEPSMPSRHVQTKAAV
PEVAPVNVRGGGGSGGELVISWEPIPEELQSGEDLGYVVAFRPQGSGVWSQAVLASPDAS
RYVYWNDSVAPLSRYEVKVGVYNAVGEGPFSPMVTVLSAEDEPSEAPSRVWARSVSSSKI
EVYWEPVPPGPGSGRITGYEVLCWEEGTEQSAGEGMRVAEGDPGPMGALFSGLKSSAVYL
VTVRARNTAGLGPPSAPCNITTKKPPPSQAPGSIEWNLTNSRIFLNWEHVKALENESEVT
GYKVVYRETWKGRTRILETNRTSVELQVPSDEEQDYLIHIKVLTDGGDGGSSGPIRIPKM
SSLNSKGSDDPTSRWICCFVLLIVSLMSY
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgttaccatgggaactgttaatccttctgtcactcaaagagtgcctggctggg
tctgtggcgtggcatcgcgccccctccagtgctcgggcctcccacgcccagagcccccgc
catggccccgtgttcacccaggagcccagtgacagtgtgctgcccctgggcgcccatgat
aaccaggccttcatcaactgcaaggccaaagggaaccctccgccacgctacaagtggagg
gtggacggaagggaggtcaaccccgcccaggaccccagctacagcctggtcgaggggaac
ttgttgatcagagaccccctagccacgcagcacgggggggtgtaccagtgtatcgccacc
aacgccatagggaccgtcgtcagcaaggaggccaagatcaagtttgcatttctacagaac
ttcagccggaagttgaggaacacggtgtcggtgcgagagggccaggcggtggttctgctg
tgtggtccgcccccccacagcggagagatcaagtattcgtgggtgttcaacgcgcagccc
cggttccttctgcaggacagccgacgcttcgtgtcccagcgcacagggaatctgtacatc
gccaaggtggaggcgtcagatgtgggcaactacacctgtgtggtgaggaacaccatgaac
aacgccacggccttcagctcccccacgcctgttgtgctgcgcacggatgccgtgatgggc
gaatacgaacccaagatcgaggtgcagttcccggagagccttcacgttcccacagggtcc
tcggttaagctggaatgctttgccttgggaaaccccgtgccctccatctcctggcggcgg
gctgacggcagtcctctggcggggaagatccagatccaccactccagcggggtgctggag
atcccctacttccggcccgaggacgaggggcagtacgagtgcgtggccgagaacagcagg
gggaggaacgtggcccgggggcggctcctcttccagaacgttgaacacctgcagtggctc
cagacgttgaaggatgctaacatcgcaatcgaggctaatctgcagtgggagtgtaaagcc
agcggcaagccgacgcccacctacagatggttgaagaacgggcagccgatggcacccggg
gaaaggattcacatagaagatgggaggctgggcatagccagtgtctctctcaccgactcg
gggatgtatcagtgtctggcggagaatgaacacggtgccatttatgccagcgcagagctc
aaggttgtggcctctgcgccggacttctcctggacccccgtgaagaagtccaccctggtc
cagcgtgggggggaagtggtcctggagtgtcgcccgcgggccgctcccaaggccttcatc
tcctggaggagaggcggaggaggggagctactgaaggacaccaggagacgggcgatcaag
gaggacggctcactgcgcatcaccaacaccagccaatcggacgcagggcggtacacgtgc
gtggcccagaacattttcggaacgtcaagcagctccggctcgctggtggtaaaagaaccc
accaggattgtggtgcccccgctggccctggacgccacagtgggccagagcgttgtgctg
ccctgcgaggttgtaagcgaccctacgctggaacccgtcttcaagtggttcctcaacggc
aagcccatcgacctgggccatcggcgggaacactttgagatgatcggaggggtgtcggca
ggtgacctgatggtacgtaacgttcagctgaagcattctgggaaatatgtatgcaaggtg
cacacagtggttgacagcgtgtcggctgcagcagacctgattgtcagagggccgccgggg
gcccctgtggacctggttgtaagcaggattaccgacaccagcgtacagctctcttggggg
tctggacccgacaaccacagccccatcaccagctacacgttgcaggccaggaccccctac
tctataggctggcagaccgcccagacagttcctgattgtgtgcctggacagatgtcgcac
gccacagtgacaggtttgaaaccctgggtggaacatgagttcagggttgtggcaatcaac
ggtgtgggcgttggggagcccagcatgccatcccgacacgttcaaactaaagccgcagtt
cctgaggtggccccagtgaacgtgagaggggggggcggcagcgggggagagctcgttatc
tcctgggagcccatcccagaggagctgcagagcggcgaggacctgggctacgttgtggcg
ttccggccgcaggggtccggcgtgtggtcccaggccgtgctggcctcgcccgacgcctcc
cgctacgtgtactggaacgacagtgtcgctcccctgtcccgctatgaggtgaaagtaggg
gtctacaacgccgtgggcgaggggccgttcagccccatggtcacagtgctctccgccgaa
gacgagccctcggaggcaccgtccagagtgtgggccaggagcgtgtcgtcctcaaagatt
gaggtgtactgggaaccggtgccaccaggtcctggcagtggacggatcactggatatgag
gtcctctgctgggaggagggtacggagcagagcgcaggagaggggatgagggtggcagag
ggagacccagggccaatgggggctctgttctccggcctgaagtccagcgccgtgtaccta
gtcactgtccgggcacgcaacactgccggcctcggcccccccagtgccccttgtaacatc
accaccaagaaaccccctccaagtcaggccccaggcagtattgagtggaaccttacgaac
tcccggatctttctgaattgggaacacgtcaaagcgctggaaaatgagtccgaagtgaca
gggtataaggtggtgtaccgggagacctggaagggaagaactcgcatcctggagaccaac
aggaccagcgtggagcttcaggtcccctccgacgaggagcaggactaccttatccacatc
aaagtcctgacagacggcggcgacggcggcagcagcggccccatccggataccaaagatg
tcaagtcttaactcaaaaggaagcgacgacccaacatcgagatggatttgttgttttgta
cttttgatagtctcactgatgtcctattag
DBGET
integrated database retrieval system