KEGG   Gadus morhua (Atlantic cod): 115558256
Entry
115558256         CDS       T10832                                 
Name
(RefSeq) cullin-4A-like
  KO
K10609  cullin 4
Organism
gmh  Gadus morhua (Atlantic cod)
Pathway
gmh03420  Nucleotide excision repair
gmh04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    115558256
  09124 Replication and repair
   03420 Nucleotide excision repair
    115558256
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gmh04121]
    115558256
   03400 DNA repair and recombination proteins [BR:gmh03400]
    115558256
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gmh04147]
    115558256
Ubiquitin system [BR:gmh04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     115558256
DNA repair and recombination proteins [BR:gmh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      115558256
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      115558256
Exosome [BR:gmh04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   115558256
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 HAT_PRP39_N
Other DBs
NCBI-GeneID: 115558256
NCBI-ProteinID: XP_030232051
Ensembl: ENSGMOG00000005837
LinkDB
Position
14:15087666..15097937
AA seq 758 aa
MMAEDIRQDKKGNFSALMEHNSNGVTRSSALAASKTGASKKLVIKNFKDKPKLSENYTED
TWLKLCDAVGAIQNSTSIKYNLEELYQAVENLCSYKVSPTLYRQLRQLCEDHVQAQIQQF
REESVDSLSFLKRMNRCWQDHCRQTIMIRSIFLFLDRTYVLQNSLLPSIWDTGLELFRTH
IVSDSGVQKRTVDGILEQIELERSGETVDRSLLRSLLGMLSDLQVYKESFEERFLVETNR
LYAAEGQRLMQERDVPEYLHHVARRLEEENDRVISYLDQSTQKPLVYCVEKQLLGEHMTS
ILQKGLTVLLDENRVTELTLLYQLFSKVKGGLHTLLQFWRDYIKAFGGEIVGTPEKDKDM
VQELLDYKDKMDNVVHTCFARNESFINSMKEAFEAFINKRPNKPAELIAKYVDSKLRAGN
KEATEEELERILDKIMIIFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKH
ECGAAFTSKLEGMFKDMELSKDIMIHFKQYTQNQSGPSNIELTVNILTMGYWPSYIPMEV
HLPAEMVKLQEVFKVFYLGKHSGRKLQWQPTLGHAVLKTEFKEGKKELQVSLFQTLVLLM
FNEGEEFSVEEIRTATGIEEGELKRTLQSLACGKARVLNKNPRGKDVEDGDRFNFNKDFK
HKLFRIKINQIQMKETVEEQVSTTERVFQDRQYQIDAAVVRIMKMRKTLSHNLLVSELYN
QLKFPVKPGDLKKRIESLIDRDYMERDKDTPTQYHYVA
NT seq 2277 nt   +upstreamnt  +downstreamnt
atgatggcagaggatatccgacaggacaagaagggtaacttctctgccctgatggagcac
aacagcaacggagtgactaggtcctctgctctggctgcaagtaagactggcgcctcaaag
aagttggtcatcaaaaacttcaaagacaagcccaagctgtctgagaactacacagaggat
acttggctaaagctttgcgatgcagtgggcgcaatccagaacagcacctccattaaatac
aacctggaggagctataccaggcggtagagaacctctgctcctataaggtgtcccctact
ctgtacagacagctgcggcagctctgtgaagaccacgtacaggcccagatccaacagttc
agagaagagtctgtggacagcctgtccttcctgaagaggatgaaccgttgctggcaggac
cactgcaggcaaacgattatgatccgtagtattttcctgtttctggaccgaacatacgtc
cttcagaattccctgcttccctctatctgggacacaggtctggagttgttccgtacccac
attgtgagcgatagcggggtccaaaagcgcaccgtggacggcatcctggagcagattgag
cttgagcggagcggggagacggtggaccggagcctgctgcgcagtctgctgggcatgctg
tccgacctgcaggtctataaggagtcgtttgaggagaggttccttgtggagaccaaccgc
ctgtatgcagccgagggccagaggctgatgcaggagagagatgtccctgaatacctgcat
catgtggctcgtcggctggaagaggaaaacgatcgagtgatcagctacctcgaccagagc
actcaaaaaccgcttgtctactgtgtggagaaacaactgctaggcgaacacatgacctct
atcctccagaagggtctgaccgttctactggatgagaacagggtgacagagttgaccctc
ctctaccagctcttcagtaaagtcaagggaggcttacacacactgctgcagttctggagg
gactacatcaaggcgttcggaggggagattgtagggacgccagagaaggacaaggacatg
gtgcaggagctcctggactacaaggacaaaatggacaacgtagtgcacacctgcttcgcc
cgcaatgagagcttcatcaactccatgaaggaggccttcgaggctttcatcaacaagaga
cccaataagccggcagaactcatagcgaagtacgtggactctaagttgcgtgccggaaac
aaggaagctacggaggaggagctggaaaggatcctggacaagatcatgattatcttccgc
tttatacatggaaaggatgtgtttgaggccttctataagaaggacctggccaagcgtctg
ctggtggggaagagtgcttctgtagacgcagagaagtccatgctgtcgaaactgaaacac
gaatgcggtgcagccttcaccagtaaactagagggaatgttcaaagacatggagctgtcc
aaagatatcatgatccacttcaaacagtatacccagaaccagagtggccccagcaacatc
gagctgacggtgaacattctgaccatgggctactggccctcctacattcccatggaagtc
cacctgcctgccgagatggtgaagctgcaggaggtgttcaaggtcttctacttggggaaa
cacagtggaaggaagctccagtggcagcccactctgggccatgccgtcctgaagaccgag
tttaaagaggggaagaaggagctgcaggtgtctctcttccagaccctggtgctgctgatg
ttcaacgagggggaggagttcagcgtggaggagatccgcaccgccactgggatagaggag
ggggagctgaagcgtacgctccagtcgctggcatgtggaaaggcccgtgtcctcaacaag
aacccccgggggaaggacgtggaggacggagaccgcttcaacttcaacaaggacttcaaa
cacaagctgttccgcatcaagatcaaccagatccaaatgaaagagacggtggaagagcag
gtgagtacaacagagcgagtgttccaggaccggcagtaccagatcgacgcagccgttgtg
cgcatcatgaagatgaggaagactctgagccacaacctgctagtgtcggagctctacaac
cagctcaagttccctgtcaagcctggggacctgaagaagaggatcgagtccctgatagac
agagactatatggagcgtgacaaggacacgcccacccagtaccactatgtcgcctga

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