Gadus morhua (Atlantic cod): 115558310
Help
Entry
115558310 CDS
T10832
Symbol
tmc3
Name
(RefSeq) transmembrane channel-like protein 3
KO
K21988
transmembrane channel-like protein
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gmh02000
]
115558310 (tmc3)
03037 Cilium and associated proteins [BR:
gmh03037
]
115558310 (tmc3)
Transporters [BR:
gmh02000
]
Other transporters
Pores ion channels [TC:
1
]
115558310 (tmc3)
Cilium and associated proteins [BR:
gmh03037
]
Other cilia and associated proteins
Stereociliary proteins
115558310 (tmc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Orf78
Motif
Other DBs
NCBI-GeneID:
115558310
NCBI-ProteinID:
XP_030232172
Ensembl:
ENSGMOG00000000574
LinkDB
All DBs
Position
14:complement(6632775..6652297)
Genome browser
AA seq
1209 aa
AA seq
DB search
MSGGSQPVATIGRATARRHKSVRKNSRRIYSHYQDQQHGSSDDEDKEDGRVDSNDPEEMF
QNIQYQKEIIANIRTRPWPMRRKLKVLKQAREIVLKYEGRLTRTRGYQAAGADLLKKLSR
LLYNIVVLFIPWEMRIKKIESHFGSGVASYFIFLRWLFGINIVLTIMTGAFIVLPELLAG
APFGTTRSKTIPKEQFSSAQDLDTIWSLGGYLQYSVLFYGYYGRVRKIGSAGYRLPLAYF
LVGMAVFAYSFIILLRKMAKNSRLSLASASDENFTFCWRVFCAWDYLIGNPEAAESKGAA
IVNNIREAIVEEQEKKKDTSLAVLISLRILANILVLLSLAGSIYIIYFVVDRSQKLEQEK
PELTLWEKNEVSVVVSLITMIAPSAFELVSQLEMYHPRTSLRFQLARVLVLYLGNLYSLI
IALLDKVNIMSSAIQVVPGNWSDPSSFLATISQPDEESLSTLVSEMYLSGIKNDSMSTTT
TTTTTMATIATALDAGSVFSNASAGKNVLVALTNHTALFEKNARSQQDPCWETYVGQEML
KLSIIDMIFTVASILLIDFIRGLVVRYLSDCCCWDLESKFPEYGEFKIAENVLHLIYNQG
MIWMGAFFSPCLPAFNVMKLIGLMYLRSWAVLTCNVPHQQVFRASRSNNFYLAMLLFMLF
LCMLPTIFAIVRYRPSQHCGPFSGQEKIYDIISDTIASDFPLWFSKVMSYITSPVVALPA
LLLLFMLIYYLQAIARSLKFTNNQLRQQLQTERSNDKKKVFQLAAARLQAPEVAVDKKTD
QQESDVTSHESSIHSSPQHNGSVTNFQSPVRRGNGISTITQSVSRAELNTGGVAGSSRSP
AVPMLHRQRPDHPPTRQQSAPFLGGPNGSCRAKSYRHVAYNPAPGFPDDVHYSDPLYRKT
ARPLLPAEAAGVVTAHSYAGRRPHVATRYVILNEHEARKKLLRSATRVPRHYCADGPSDL
CPPPRSGKRYAPRAPLQPQRSLASQPHLSEEEEEMEEEEAGVGLEGRRKAQRKGLLGQDG
RRPRSLSDLYQPARFYIGERVESQVSTGKDAHVARGRRGAGQAGANARAEEEEEGEEDEI
DWEGLEAYACSHAGGRRAEPAAAQVRRPAQSPGRFGQSSGVARAGEPQVKPKVKSRHKME
PSLTESDSASLGSSSDQQNSSTDQYIQVIHNKERHLKSDARQGKLAKKKSKASIDLNVSR
SNELVCSNV
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atgagcggggggtcccagccagtggcgacgatcggtagggccaccgccaggagacacaag
agtgtgaggaagaactccaggaggatctactcccactaccaggaccaacagcacggctct
tcggacgacgaggacaaagaggatgggcgcgtggacagtaacgacccggaggagatgttc
cagaacatccagtaccagaaggagatcatcgccaacatccgcacccggccctggccaatg
agacgcaagctcaaagtgctcaagcaagcccgggagattgtgttgaagtacgagggcaga
ctgacccggaccagagggtaccaggcagcaggagctgatctgctgaagaagctttccaga
ctgctctacaatattgttgttctcttcattccctgggagatgagaatcaagaagatagaa
agtcactttggctccggggtggcctcctacttcatcttcctgcgctggctgtttggcatc
aacatcgtcctcaccatcatgaccggggccttcatcgtcctaccagagctgctggcaggg
gccccgtttggaacgacgagaagtaagaccatccccaaggagcagttctcttcagcacag
gatctggacaccatctggtctcttgggggctatctgcagtactcggtgctgttctacggc
tactacggcagagtgaggaagatcggcagtgcgggctaccgtctccctctggcctacttc
ctggtcggcatggcggtcttcgcctacagcttcatcatcctgttgagaaagatggcaaag
aactcccgtctgagcctggccagcgcctcggacgagaacttcaccttctgctggcgggtg
ttctgcgcctgggactacctgatcgggaacccggaggcggccgagagcaaaggagccgcc
atcgtcaacaacatcagggaagccattgttgaggagcaggagaagaagaaagatacaagc
ctggcagtcctcatcagcctgcgtatcctggccaatatcctggtgctgctgtcgctggcg
ggcagcatctacatcatctactttgtggtggaccgctcccagaagctggagcaggagaag
ccggaactcaccctgtgggagaagaatgaggtcagtgtggtggtgtctctgatcaccatg
atcgctccgtctgcgtttgagctggtctctcagctggagatgtaccacccaagaacatcc
cttcgcttccagctggccagggttctggtgctgtacctgggtaatctgtacagcctaatc
atcgccctgctggacaaggtcaacatcatgagctctgctatccaggtggttcctggtaac
tggtctgaccccagctccttcctggccaccatctcccagccagacgaggagagtctttcc
accttggtctcagaaatgtatctctctggaatcaagaacgacagcatgagcacgacgaca
acgacgacaaccaccatggcgaccatcgccacggcgctggacgcgggcagcgtcttcagc
aacgccagcgctggcaagaacgtcctggtggccttgaccaatcacacggctctgtttgag
aagaacgcccgctcgcagcaggacccctgttgggagacctacgttgggcaggagatgctg
aagctgtccatcatcgacatgatcttcacggtggccagcatcctactgatcgacttcatc
cgtggtctggtcgtgcgttacctcagtgactgctgctgctgggacctggagagcaagttt
cctgaatacggagaattcaaaatagccgagaatgtcctgcacctgatctacaaccagggg
atgatctggatgggggcgtttttctccccttgtctccccgcctttaacgtgatgaagctg
attggcttaatgtacctgaggagctgggcggttctgacctgcaatgttccccatcagcaa
gtcttccgggcctccagatcaaacaacttctatctagccatgttgttgttcatgctgttc
ctgtgcatgctacccactatctttgccatcgtgagatacagaccatcacagcattgtggg
cctttcagtggccaggagaagatttatgacatcatttcagacaccattgccagtgacttc
ccgctgtggttcagcaaagtgatgagttacatcaccagccctgttgtggctctgcccgcg
ctgctgctgctcttcatgctgatatactacctccaggcaatcgcaagatccctcaagttc
accaacaaccagctgaggcagcagctccagacagaacggtcaaatgacaagaagaaagtc
ttccagttggctgcagccaggctccaagccccagaggtggccgtcgataagaagacagac
cagcaggagagcgacgtcacgagccacgagtcctccatccactcatcgccgcagcacaac
ggcagcgtcaccaacttccagtcgcccgttcgccgcggtaacggcatcagcaccatcacc
cagtcggtgtccagggctgagctgaacacaggaggcgtggctggatcttccagaagtcca
gccgtgccaatgttgcacaggcagagaccggaccatccaccaactaggcagcagtctgcc
ccgttcctcggcggccccaacggctcctgccgggccaagtcgtaccgccacgtggcctac
aaccccgcccccggcttccccgacgacgtccactactcggacccgctgtacaggaagacg
gcgcggccgctgctcccggccgaggcggcgggcgtcgtcacggcccacagctacgccggc
cggcggccgcacgtggccacgcgctacgtcatcctgaacgagcacgaggcgcgcaagaag
ctgctgcgctcggccacgcgcgtcccccgccactactgcgccgacggaccctcggacctg
tgcccccccccacgcagcggcaagcgctacgccccccgcgcccccctccagccccagagg
tccctggcctcgcagccccacctgagcgaggaggaggaggagatggaggaggaggaggca
ggggtggggctggaaggcaggaggaaggcgcagaggaagggcttgctgggacaggacggc
cggcgcccgcggtccctgtcggacctgtaccagccggcgcgcttctacatcggcgagcgc
gtggagagccaggtgtccacggggaaggacgcccacgtggcccggggcaggcggggggcg
gggcaggcgggggcgaacgccagggcggaggaggaggaggagggggaggaggacgagata
gactgggaggggctggaggcgtacgcctgctcgcacgccggcgggaggagggcggagccg
gcggcggcgcaggtccgacgccccgcccagtctcccgggcgcttcgggcagtcctccggc
gtggccagggcgggggagccccaggtcaagcccaaggtcaagagcaggcacaagatggag
ccctccctgacggagtctgactccgcctccttgggctccagcagcgaccagcagaacagc
agcaccgaccagtacatccaggtcatccacaacaaggagcgccatctcaagtctgacgcc
aggcagggcaagctggctaagaagaagtccaaggccagcatcgatctaaacgtctcaagg
tcaaatgaactggtttgctccaatgtgtga
DBGET
integrated database retrieval system
