KEGG   Gadus morhua (Atlantic cod): 115558394
Entry
115558394         CDS       T10832                                 
Symbol
tbp
Name
(RefSeq) TATA-box-binding protein
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
gmh  Gadus morhua (Atlantic cod)
Pathway
gmh03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    115558394 (tbp)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:gmh03000]
    115558394 (tbp)
   03021 Transcription machinery [BR:gmh03021]
    115558394 (tbp)
Transcription factors [BR:gmh03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    115558394 (tbp)
Transcription machinery [BR:gmh03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     115558394 (tbp)
  RNA polymerase III system
    TFIIIB
     115558394 (tbp)
  RNA polymerase I system
    SL1/TIF-1B
     115558394 (tbp)
SSDB
Motif
Pfam: TBP
Other DBs
NCBI-GeneID: 115558394
NCBI-ProteinID: XP_030232338
Ensembl: ENSGMOG00000012435
LinkDB
Position
14:9009866..9015291
AA seq 299 aa
MDPNNTPFQGLASPQGAMTPGMPIFSPMMPYGSGLTPQPVTNTNSLSILEDQQRLQQQQQ
AQQANAGLAGTSGQTPTLFHSQTVGGSTTTALPGNTPLYNTPLTPMTPITPSTPASESSG
IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV
CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF
SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRGEIYEAFENIYPILKGFRKTT
NT seq 900 nt   +upstreamnt  +downstreamnt
atggacccgaacaatacaccctttcaggggctggcgtccccacagggtgccatgaccccg
gggatgcccattttcagtccaatgatgccatatggctctggcctgaccccccagccggtt
accaacaccaacagcctgtccatcctagaggaccagcagagactgcagcagcagcaacaa
gcccagcaggccaacgcaggtcttgcaggtacgtcgggtcagacccctacgttgttccac
tcccagaccgttggggggtccaccactactgccctaccaggaaacacccccctgtacaac
acaccgctaacccccatgacacccatcactccctccacgcccgcctcggagagctccggg
atcgtaccacagctgcagaacattgtatcaaccgtgaatctgggctgtaaacttgacctc
aagaccatcgcactgagggctagaaacgcagagtacaaccccaagcgttttgcggccgtc
atcatgagaatacgagagccccgcaccacggccctgatcttcagctctgggaagatggta
tgcactggagccaagagtgaggagcagtcgaggctagcggccaggaagtacgcccgcgtg
gtgcagaagctgggcttcccagccaagtttctggacttcaaaatccagaacatggtgggc
agctgcgacgtcaagttccccatcaggctggagggcctggtccttacccaccaacagttc
agcagttatgaacctgagcttttcccaggtctcatctacagaatgattaaacctagaatc
gtcctgctcatctttgtctctgggaaagtggttctaacaggtgccaaggtgaggggagag
atttatgaggcctttgaaaacatctaccccatcctgaagggcttccgtaaaacaacgtag

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