Gadus morhua (Atlantic cod): 115558394
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Entry
115558394 CDS
T10832
Symbol
tbp
Name
(RefSeq) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115558394 (tbp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmh03000
]
115558394 (tbp)
03021 Transcription machinery [BR:
gmh03021
]
115558394 (tbp)
Transcription factors [BR:
gmh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
115558394 (tbp)
Transcription machinery [BR:
gmh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
115558394 (tbp)
RNA polymerase III system
TFIIIB
115558394 (tbp)
RNA polymerase I system
SL1/TIF-1B
115558394 (tbp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-GeneID:
115558394
NCBI-ProteinID:
XP_030232338
Ensembl:
ENSGMOG00000012435
LinkDB
All DBs
Position
14:9009866..9015291
Genome browser
AA seq
299 aa
AA seq
DB search
MDPNNTPFQGLASPQGAMTPGMPIFSPMMPYGSGLTPQPVTNTNSLSILEDQQRLQQQQQ
AQQANAGLAGTSGQTPTLFHSQTVGGSTTTALPGNTPLYNTPLTPMTPITPSTPASESSG
IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV
CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF
SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRGEIYEAFENIYPILKGFRKTT
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggacccgaacaatacaccctttcaggggctggcgtccccacagggtgccatgaccccg
gggatgcccattttcagtccaatgatgccatatggctctggcctgaccccccagccggtt
accaacaccaacagcctgtccatcctagaggaccagcagagactgcagcagcagcaacaa
gcccagcaggccaacgcaggtcttgcaggtacgtcgggtcagacccctacgttgttccac
tcccagaccgttggggggtccaccactactgccctaccaggaaacacccccctgtacaac
acaccgctaacccccatgacacccatcactccctccacgcccgcctcggagagctccggg
atcgtaccacagctgcagaacattgtatcaaccgtgaatctgggctgtaaacttgacctc
aagaccatcgcactgagggctagaaacgcagagtacaaccccaagcgttttgcggccgtc
atcatgagaatacgagagccccgcaccacggccctgatcttcagctctgggaagatggta
tgcactggagccaagagtgaggagcagtcgaggctagcggccaggaagtacgcccgcgtg
gtgcagaagctgggcttcccagccaagtttctggacttcaaaatccagaacatggtgggc
agctgcgacgtcaagttccccatcaggctggagggcctggtccttacccaccaacagttc
agcagttatgaacctgagcttttcccaggtctcatctacagaatgattaaacctagaatc
gtcctgctcatctttgtctctgggaaagtggttctaacaggtgccaaggtgaggggagag
atttatgaggcctttgaaaacatctaccccatcctgaagggcttccgtaaaacaacgtag
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integrated database retrieval system