Gadus morhua (Atlantic cod): 115558438
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Entry
115558438 CDS
T10832
Symbol
kars1
Name
(RefSeq) lysine--tRNA ligase isoform X1
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
115558438 (kars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gmh01007
]
115558438 (kars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gmh03016
]
115558438 (kars1)
Enzymes [BR:
gmh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
115558438 (kars1)
Amino acid related enzymes [BR:
gmh01007
]
Aminoacyl-tRNA synthetase
Class II (A)
115558438 (kars1)
Transfer RNA biogenesis [BR:
gmh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
115558438 (kars1)
Prokaryotic type
Other AARSs
115558438 (kars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
115558438
NCBI-ProteinID:
XP_030232428
Ensembl:
ENSGMOG00000002633
LinkDB
All DBs
Position
14:complement(11231414..11240442)
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AA seq
611 aa
AA seq
DB search
MLFSLVRVARQQLCQAFGVRGNGFRFALPCSASIPSLSHSNRWRGDKSELKRRMKADKKA
ADKDAKVKETLEQKKGSDGDGDQNAYGADEETLDPNQYFKIRTQAINALKGTAEDPYPHK
YHVDLCLTDFVEKYNYLQPGDQLTDVVLSVTGRVHAKRESGAKLLFYDLRGEGLKLQVMA
NSRTYKSEEAFVAINNKLRRGDIIGVRGNPGKTKKGELSIIPVEMTLLSPCLHMLPHLHF
GLKDKETRFRQRYLDLILNDYVRQKFLTRAKIITYLRRFLDEQGFLEIETPMMNLIPGGA
VARPFVTYHNDLDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNPEFTTC
EFYMAYADYNDLMEITEKLLSGMVKHITGGYKITYHPEGPEGQAYEIDFTPPFRRICMTG
DLEKEMGVKFPLPETYDSDETRKFFDDLCAQKGVECPPPRTTARLLDKLVGDFLEVTCIN
PTFIMDHPQIMSPLAKWHRSKKGLTERFELFVMKKEICNAYTELNDPIRQRELFEQQAMA
KAEGDDEAMGVDETFCTALEYGLPPTAGWGMGIDRVTMFLTDSNNIKEVLLFPAMKPDDN
KAAPPTEGTSV
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgttgttttcactggtcagagtggcaaggcagcagttgtgccaagcctttggggtcagg
ggaaatgggtttagatttgcacttccctgctcagcttcaatcccatctctaagtcacagc
aatcggtggagaggtgacaaaagtgagctgaaaagacgaatgaaggctgacaagaaggca
gctgacaaggatgcaaaggttaaggagactttggagcagaagaaaggatccgatggagat
ggtgaccaaaatgcttatggggcagatgaagagactctggatcccaatcaatacttcaag
atccgtacccaggccatcaatgccctcaagggcacagcggaggacccttatcctcacaaa
taccatgttgatttgtgcctcaccgacttcgttgagaaatacaattatctgcagccagga
gaccaactcacagatgtcgtactcagtgttacaggccgtgtccatgccaagagagagtct
ggtgccaagctgctcttctacgacctgcggggagagggtctcaagttgcaggttatggca
aactcaaggacctacaaatcggaggaggcctttgtggccataaacaacaagctgcgccga
ggggacatcattggcgtccgcggtaaccccgggaagaccaaaaagggggagctgagcatc
attcccgtcgagatgacgcttttgtctccttgtctgcacatgctgccccatctgcacttt
gggctcaaagacaaggagacacgcttccgtcagcgatacctggatctgatcctcaatgat
tatgtgaggcagaagtttttaacgcgtgcgaaaatcattacatacctgcggcgcttcctg
gacgagcaaggatttttggagattgagactccaatgatgaacctcattccgggaggtgcg
gtggctcgtccatttgtcacataccacaatgatttggacatgaatctctacatgagaatc
gctcctgaactctaccacaagatgcttgtggttggtggaatagatagggtgtatgagatc
gggcgccagttcagaaacgagggcatcgatctaactcataaccctgagtttaccacctgt
gaattctacatggcgtatgcagactataacgacctcatggagatcacagagaaacttctc
tcagggatggtgaagcacatcaccggagggtacaagatcacctatcatccggagggtcct
gagggacaggcctacgagatcgacttcacccctcccttcagaagaatctgcatgaccggg
gacctggagaaggaaatgggcgtcaagttcccattgccggaaacctacgacagtgacgag
actcgcaaattctttgatgacctgtgtgcacagaagggagtggaatgtcctccacccaga
accacagctcgtctccttgacaagttggtgggagatttccttgaggtcacgtgtatcaac
cctacattcatcatggatcatccacaaatcatgagtccactggccaaatggcacagaagc
aagaagggtctgactgagcgctttgagctctttgtgatgaagaaggagatctgcaacgcc
tacaccgagttgaatgatcccatcagacaacgggagctctttgagcagcaggccatggcc
aaagcagagggtgatgacgaggctatgggtgtggacgagaccttctgtacagcgctggag
tacggtctgccacccaccgctggctggggcatgggaatcgaccgggtcaccatgttcctc
acggactccaacaatatcaaggaggtactccttttccccgccatgaagcccgacgacaac
aaggcggcgccacccactgagggcacctctgtttag
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