Gadus morhua (Atlantic cod): 115558449
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Entry
115558449 CDS
T10832
Symbol
vps35
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04144
Endocytosis
Brite
Membrane trafficking [BR:
gmh04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
115558449 (vps35)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
115558449
NCBI-ProteinID:
XP_030232449
Ensembl:
ENSGMOG00000008581
UniProt:
A0A8C5C723
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Position
14:13581866..13595000
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AA seq
797 aa
AA seq
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MPTTQSPQDEQEKLLDEAVQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSPK
SYYELYMAISDELHYLEVYLTDEFAKGRKVSDLYELVQYAGNIIPRLYLLITVGVVYVRS
FPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDDGEPPEGTEEMTGDINDS
IDFVLLNFAEMNKLWVRMQHQGHSRDREKREKERQELRILVGTNLVRLSQLEGVNVDKYK
QVVLPGVLEQVVNCRDSLAQEYLMECIIQVFPDEFHLQTLNPFLRSCAELHQHVNVKNII
IALIDRLALFAHREDGPGIPAEIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAM
KCYPDRVDYVDKVLESTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLKLK
YFPPLFEYFDFESRKTMSCYVLTNTLDYNTTIVAQEQVDAILSLVSTLIQDQPDQPAEDP
DAEDFAEEQSLVGRFIHLLHSDDPDQQYLILNTARKHFGAGGNQRIRYTLPPLVFAAYQL
AFRYKENSSWDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIAFENH
ETVAYEFMSQAFSLYEDEISDSKAQLAAIMLIIGTFEHTRCFSEENHEPLRTQCALAASK
LLKKPDQCRAVSVCAHLFWSGRSTEKNGEEIRDGKRVMECLKKALKIANQCMDPSLQVQL
FIEILNRYICFYERENDAVTVQVLNQLIQKIREDLPGLETSEETEQINKHFHNTLEHLRL
QKESPQSEGPAYEGLVL
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgcctactacccagtctccccaggatgagcaggagaagcttctggatgaggctgtgcag
gcagtcaaagtccaatcctttcagatgaaacgatgcctggacaagaacaagctaatggat
gctctaaagcatgcttctaacatgcttggagaattgaggacctctatgctgtcccccaag
agttactatgagctctacatggccatctctgatgagctgcactacttggaggtctatttg
accgacgagtttgccaagggtcgcaaggtttctgacctttatgaacttgtccaatatgct
ggcaacatcattcctaggctctacctcctgattaccgtaggggtggtgtatgtgcgctca
tttcctcagtcccgaaaggacatcttgaaggacctggtggagatgtgtcgaggtgtccag
catcctcttcgggggctgttcctcaggaactacctactgcagtgcactcgcaacatcctc
ccagatgatggagagccgcctgaagggactgaagagatgactggcgacattaacgactcc
atcgactttgtcctgcttaattttgccgagatgaacaagctttgggtgcgtatgcagcac
cagggccacagccgtgatcgcgagaagagggaaaaggagaggcaagagcttcggatcctg
gttggaacaaatcttgttcgcctcagccagctggaaggagtcaatgtggacaagtacaaa
caggttgtgttaccaggtgtgctggagcaggtggtaaactgtagagattcacttgcccag
gagtatctcatggagtgcatcattcaggtgttcccagatgaattccatcttcagacactc
aacccgtttcttcgctcgtgtgctgaattacaccagcacgtcaatgtcaaaaacattatc
attgcgcttattgacagattagcactcttcgcacacagagaagatggccccggtatcccg
gctgaaatcaaactgtttgacatcttctcccaacaagtggccaccgtcattcagtctcgc
caggatatgccatcggaggacgtagtgtctctccaggtgtcccttataaacctggccatg
aagtgctaccccgatcgtgtggactatgtggacaaagtcctagagagcaccgttgagatc
tttaacaagctcaatttggaacacatcgcaaccagtagtgccgtgtccaaggagctgacc
aggctgctcaagataccagtggatacctacaacaacatccttacggttctgaagctcaag
tatttcccacctctctttgagtactttgactttgagtcacgcaaaaccatgagctgctac
gtcctgaccaacaccttggactacaacactaccatcgtagcgcaggagcaggtggacgcc
atccttagtctcgtgtccacactgattcaagaccagccagaccagcctgccgaggacccg
gacgcagaggactttgctgaggagcagagtctggtcggccgtttcattcacctgctgcat
tcagacgaccccgaccagcagtacctgatattgaatacagccaggaagcattttggcgca
ggcggaaaccaaaggattcgatacactctccctccgctggtgtttgctgcctaccagctg
gccttcagatacaaagagaattcttcttgggatgacaagtgggagaagaagtgtcagaag
atcttctccttcgcccaccagaccattagtgctctcatcaaggcagagcttgcggagctt
cccctccggcttttcctccagggggcgctagcagcaggagagatcgcctttgagaaccac
gaaactgtagcctacgaatttatgtcgcaggccttctctctgtacgaggatgagatcagc
gactcaaaggcccagctcgcagccatcatgctcatcatcggaacctttgagcacacccgc
tgcttcagtgaggagaatcatgagcctctgaggacccagtgtgcactggctgcctctaag
ctgctaaagaaacccgaccagtgccgggcagtcagtgtctgcgcccatctcttctggtct
ggccggagcacagaaaagaacggagaagagatccgtgatgggaagcgagtgatggagtgt
ctgaagaaagccctaaaaattgcaaaccagtgcatggacccgtcactgcaggtccagctg
ttcattgaaatccttaacagatacatctgcttctatgagcgggagaatgatgcggtcacg
gttcaggtattgaaccagctgatccagaagatccgagaagacttgcctggtctggaaaca
agtgaggagactgagcagatcaataagcacttccacaacaccctggagcatcttcgctta
cagaaagaatctcctcagtctgagggccctgcctatgagggcctggtcctctaa
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