Gadus morhua (Atlantic cod): 115558583
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Entry
115558583 CDS
T10832
Symbol
lrrc49
Name
(RefSeq) leucine-rich repeat-containing protein 49 isoform X1
KO
K16606
leucine-rich repeat-containing protein 49
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gmh03037
]
115558583 (lrrc49)
04812 Cytoskeleton proteins [BR:
gmh04812
]
115558583 (lrrc49)
Cilium and associated proteins [BR:
gmh03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
115558583 (lrrc49)
Cytoskeleton proteins [BR:
gmh04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylase complex components
115558583 (lrrc49)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_9
LRR_4
LRR_8
LRR_14
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
115558583
NCBI-ProteinID:
XP_030232672
Ensembl:
ENSGMOG00000002105
LinkDB
All DBs
Position
14:complement(26593389..26626078)
Genome browser
AA seq
797 aa
AA seq
DB search
MRAHRQTTGVHPEGMSLTPMVNRYKLHLAAVKSLVPEKLHRTANLNEETDPRFCDPTGER
NTHPSLTKNYSKTDQRSAGGRRRPEAPSVLLLAGRCLDSVHGGASDLQPNPGDRPRRPAQ
SAGYRKDGSTFPPPRQSGDWEEMDEGSLHRLPSTLLSREVVGSSSERIDLDRRCLDACPQ
LGCMDGLRLLNLQHNRIPRVLHLSQLQRLVFLDLYHNQLCDMAGLEGLLSLRVLMLGQNR
IRKLSCLENLSKLEVLDLHANQLTRITNVSHLGRLRLLNLAGNDISRVENLQGLDSLTEL
NLQRNCISSVTELETLPCLQRLFLSWNNISSLAGIACLGDSCPLSELTLDGNPVALETWY
RQAVLRCVLHLKQLDMKRITDEERRMAAVQARREDEKKKETHKQAVHKEKRRLAIRNAAQ
QWEGVRASLEPPPPNGAKEEVSPENSPAHSPAQTNGIAQEPSPDEPKRVSPLSGPEKPTI
ASENRLRVPSRPNSPRDPKLLEAGSAVQILSLSEQHLAELDGDTLRLVGPGALEALERGW
GAQTAGAVCTITFRYVQFDAIVPTLPRIRVKFPNLTHLVFMETNLSRLVQLAALAQLRRV
EQLTIHPEGNPVAALALWRPFLIYRLHHFNLQRLNGLEVTMNDVIAAERVFGTLGLVAAT
ETPRCRLLLLLEESRKRQLQFHLEGRGRRPGQSPEELRENGKLLGEGLSRALFNYPCRDG
ASDSSEEGAVEPSERAANTQQYLQELVQRASDTHLKGEALHKLWPSLFVEMVRDCVLDMR
DRPSYRQACLLRLSHSK
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgcgagctcataggcaaaccacgggggtccaccccgaaggcatgtccctcacaccgatg
gtcaacaggtataaactgcacctggcagcggtgaagtctctggtcccggagaagctgcac
aggacagcgaatcttaatgaggagacagaccctcggttctgtgaccctacaggagagaga
aacactcacccctcactgacaaagaactactcaaaaacagaccagcggtccgccgggggc
cggaggaggccagaggccccatcggtgctcctcctggctgggaggtgtttggactccgtc
cacggaggcgcctcagacctccagcccaaccccggtgacaggccgagaaggccggcccag
agtgcaggatataggaaggatggcagcaccttcccccctcctagacaatcaggtgattgg
gaagagatggacgagggttcgttacacaggctccccagtaccttgttgtcccgggaggtt
gtggggtccagctctgagcggattgatctggacaggcgctgtctggacgcgtgcccccag
ctgggctgtatggacgggctgcgtctgctcaacctgcagcacaaccggatccccagggtg
ctgcacctctcccagctgcagcggctggtgtttctggacctctaccacaaccagctctgt
gacatggccggcctggagggcctgctctccctcagggtgctgatgctgggccagaacaga
atccgtaaactgagttgtctggaaaacctgtccaaactggaagttctggatctgcatgca
aatcagctcaccaggataaccaacgtgtcccacctgggccggctgcgccttctcaacctg
gcaggaaatgacatcagccgcgtggagaacctgcaaggtctggactccctcactgaactc
aacctccaacgcaactgcatctcctctgtgacggagctggaaacccttccctgcctgcag
cgcctcttcctcagctggaacaacatcagcagcttggcagggatcgcctgcctcggagac
tcctgccccctctctgagctcaccctggatgggaatcctgtagccctggagacatggtac
agacaggccgtcctacgctgtgtgcttcacctcaaacagctggacatgaagcggatcaca
gacgaggagcggcgtatggctgctgtccaggctcggagagaggacgagaagaagaaggag
acgcacaagcaggcggttcataaggagaagcggcggctggccatccgtaacgcggcccag
cagtgggagggggtccgggccagcctggagcccccccctcccaatggagccaaggaggag
gtcagtccggagaacagccccgcccacagccccgcgcagaccaatggcatcgcccaggag
ccctccccggacgagccaaagcgggtcagccccctgtcaggacccgagaagcctaccatt
gctagtgagaaccgactccgcgtgcccagccgtcccaacagcccccgagaccccaagcta
ctggaggccggctccgcggtgcagatcctgtcgctgtcggagcagcacctggcggagctg
gacggggacacgttgcggctggtgggccccggggccctggaggccctggagcgcggctgg
ggcgcgcagaccgctggcgccgtctgcaccatcaccttccgctacgtccagttcgacgcc
atcgtgcccacgctgccccgcatacgagtcaagttccccaacctcacgcacctggtcttc
atggagaccaacctgagccggctggtccagctggcggctctggcccagcttaggcgggtg
gagcagctcaccatccaccccgaggggaacccggtggccgccctggccctgtggcgcccc
ttcctcatctaccgcctgcaccacttcaacctgcaacgcctcaacggcctggaggtgacc
atgaatgatgtcatagcggcggagcgagtgttcgggaccctgggtctggtggccgccacc
gagacgccgcgctgccgcctgctgctgctgctggaggagtcccggaagcggcagctgcag
tttcacctggaggggcgtggccggcggcctggccagagcccagaggagctgagggagaac
gggaagctgctgggggaggggcttagccgggcgctgttcaactacccgtgccgggacggc
gcgagcgacagctccgaggagggcgctgtggagccgtcggagcgtgccgccaacacccag
cagtacctgcaggagctggtccagcgggcgtccgacacccacctgaagggagaggcgctg
cacaagctgtggccctctctgtttgtggagatggtgagggactgcgtgttggacatgagg
gaccggccgtcctaccgccaggcctgcctcctcagactgtcccacagcaagtga
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