KEGG   Gadus morhua (Atlantic cod): 115558612
Entry
115558612         CDS       T10832                                 
Symbol
ddb1
Name
(RefSeq) DNA damage-binding protein 1
  KO
K10610  DNA damage-binding protein 1
Organism
gmh  Gadus morhua (Atlantic cod)
Pathway
gmh03420  Nucleotide excision repair
gmh04120  Ubiquitin mediated proteolysis
Brite
Ubiquitin system [BR:gmh04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Adoptor protein
     115558612 (ddb1)
DNA repair and recombination proteins [BR:gmh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      115558612 (ddb1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      115558612 (ddb1)
SSDB
Other DBs
NCBI-GeneID: 115558612
NCBI-ProteinID: XP_030232725
Ensembl: ENSGMOG00000019386
LinkDB
Position
14:17099815..17150333
AA seq 1140 aa
MSYNYVVTAQKPTAVNACITGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK
IAVMELFRPKGESKDLLFILTSKYNACILEYKQNGESIDIITRAHGNVQDRVGRPSETGI
IGIVDPECRMIGLRLYDGLFKVIPLDRDNRELKAFNIRLEELQVIDVHFLYGCQAPTVCF
IYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIPVPEPFGGAIIIGQESITYH
NGDKYLAIAPPTIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEELMDGAVVLKDL
HVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNDQGSYVGVMETFTNLGPIV
DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSEPGRD
TDDMLVLSFVGQTRVLMLSGEEVEETELPGFVDNQQTFYCGNVAHQQLIQITSGSVRLVL
QESKALVSEWKEPQGRNISVAACNHTQVVLAVGRALFYLQILAGELKQIGTTLMEHEVAC
LDITPLGEAGDQSPLCAVGLWTDISARVLKLPCFTTLHKEMLGGEIIPRSILMTTFEGSY
YLLCALGDGALFYFGLDLQTGLLRERKKVTLGTQPTVLRTFRSLSTSNVFACSDRPTVIY
SSNHKLVFSNVNLKEVNYMCPLNSEGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYES
PRRICYQEVSQCFGVLSSRVEVQDVNGTTSAVRPSASTQALSSSVSSSKLFPSSTSPHEV
SFGEEVEVHSLLVVDQHTFEVLHAHQFLPSEYALSMVSCRLGRDTSVYFVVGTAMVYPEE
AEPKQGRIIVFHYTDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELR
TECNHYNNIMALYLKNKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEIL
DDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGVFHLGEFVNVFSHGSLVLQNLGES
STPTQGSVLFGTVNGMIGLVTSLSESWYSLLLDLQNRLNKVIKSVGKIEHSFWRSFHTER
KTEQATGFIDGDLIESFLDLGRTKMQEVVNTLQIDDGSGMKREATVDEVIKIVEELTRIH
NT seq 3423 nt   +upstreamnt  +downstreamnt
atgtcttacaactacgttgtaaccgctcaaaaacctacggcagtcaatgcctgcatcaca
ggtcacttcacctctgcagaggacctcaatctgctcatagccaagaacacacggctggag
atctatgtggtgacagcagagggactcaggcctgtcaaggaggtaggcatgtacggcaag
atcgctgtcatggaactcttcaggccaaagggtgaaagtaaggacctgttatttatcctc
acatcaaagtacaacgcctgcatcctagaatacaaacagaatggcgagagtattgacatt
atcacccgtgcccatggaaatgtgcaggaccgtgtgggacggccctctgagacgggcatc
atcggtatcgtggaccctgagtgtcgcatgattggcctgcggctctacgatggcctcttc
aaggtaatccctctggaccgggacaaccgcgagctcaaggccttcaacatccgcctggag
gagctgcaggtcattgacgtgcacttcctctacggctgtcaggccccgacggtctgcttc
atctaccaggacccacagggacggcacgttaagacctatgaagtttccctcagagagaag
gagttcaacaagggcccgtggaaacaggagaatgtggaggcagaggcgtccatggtcatc
ccagtgccagagccatttgggggtgctataatcattggacaagaatcaatcacttatcac
aatggggacaaatacttggccatagctcctcctaccatcaagcaaagcaccatagtgtgt
cacaaccgagtggaccccaacggctcacgctacctgctgggggacatggaaggccggctg
ttcatgctgctcctggagaaggaggagctgatggacggggcagtggtcctcaaagacctc
cacgtggagctgctaggagagacgtccatcgcagagtgtctgacatacctggataacgga
gtggtgtttgtgggctcaagactcggggactcccagctagtgaagctgaacgtcgacagc
aacgaccagggttcctacgtgggggtgatggagaccttcaccaacctggggcccattgtg
gacatgtgcgttgtggacttggagcggcagggccaaggccagttggtgacctgctcgggt
gcgttcaaggagggctcgctcagaatcatccgcaacgggattggcatccacgaacacgcc
agcattgacctgccgggaatcaaaggtctgtggccgctgcgctcagagcctggccgagac
accgacgatatgctggtgctgtctttcgtgggacagactcgagtgttgatgcttagcgga
gaggaggtggaggagacggagcttccaggcttcgttgacaaccagcagaccttctactgt
ggaaatgttgcacatcagcagcttatccagataacgtcgggctcggtgcgtctggtgctg
caggagagcaaggcgctggtcagcgagtggaaggagccccagggcaggaacatcagcgtg
gccgcctgcaaccacacccaggtggtgctggccgtcggccgcgccctcttctacctccag
atcctggctggggagctcaaacagataggcaccacattgatggagcatgaggtggcctgt
ctcgacatcacccccctgggggaggctggcgaccagtcccccctctgcgcagttgggctg
tggacggacatctcagcgcgggtgctaaagctgccctgcttcacgaccctccacaaggag
atgctgggaggagaaatcatcccccgttccatcctcatgaccaccttcgagggcagctac
tacctgctctgcgctctcggggatggagcactcttctactttggtctggacctgcagacg
ggcctgctgcgcgagcgcaagaaggtgaccctgggcacccagcctacagtgctgcgcacc
ttccgctcactgtccacctccaacgtgtttgcctgctccgaccggcccaccgtcatttac
tcctccaaccacaagctggtgttctccaacgtcaacctcaaggaggtcaactacatgtgc
ccgctcaactcggagggatacccagacagtttggctctggccaataacagcaccttgact
atcgggaccatagacgagatccagaaactccacatacggacggttcccctctatgagtct
cccagacgtatctgctaccaggaggtgtcgcagtgtttcggggtgctgtccagcagggtt
gaggtgcaggatgttaacggcacaacgtctgctgtccggcccagtgccagcactcaggct
ctctccagcagcgtgagctccagcaagctgttccccagcagcacttcgccccacgaggtc
tcctttggggaggaggttgaggtccacagtctgctggttgtggatcagcacacctttgaa
gtgctccacgcccaccagttcctgcccagcgagtacgccctcagcatggtctcctgccgc
ctcggacgggacacctccgtttactttgtggtgggcacagccatggtgtaccccgaggag
gccgagccgaagcagggccgcatcatcgtcttccactacactgacggcaagctgcagact
gtggctgagaaggaggtgaagggggctgtgtactccatggtggagttcaacggcaaactg
cttgccagcatcaacagcacagtgcgtctgtacgagtggacggcagagaaggagctgcgc
acggagtgcaaccactacaacaacatcatggccctctacctgaagaacaaaggggacttc
atcctggtgggggacctgatgaggtccgttctcctgctggcctacaaacccatggagggc
aactttgaagagattgcccgtgactttaatccaaattggatgagtgccgtggagatcctg
gatgatgacaacttcctgggggcggagaatgcgttcaacctgtttgtgtgtcagaaggac
agcgcggccaccacagacgaggagcggcagcacctccaggaggtgggggtcttccacctt
ggggagttcgtcaacgtgttctcccacgggtcgctggtgctgcagaacctgggggagagc
tccacgcccacccagggctccgtgctcttcggcaccgtcaacggcatgataggcctggtg
acgtccctgtcggagagctggtacagcctcctactggacctacagaaccgcctcaacaag
gtcatcaagagcgtgggcaagattgaacacagcttctggaggtcgttccacacagagcgc
aaaacagagcaggccacggggttcatcgatggggacctgatcgagagcttcttggacctg
ggccgcaccaagatgcaggaagtggtcaatactctgcagatcgatgacggcagcggcatg
aagcgtgaagccacagtggacgaggtgatcaagatcgtagaagagctgaccaggatccat
tag

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