Gadus morhua (Atlantic cod): 115558612
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Entry
115558612 CDS
T10832
Symbol
ddb1
Name
(RefSeq) DNA damage-binding protein 1
KO
K10610
DNA damage-binding protein 1
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03420
Nucleotide excision repair
gmh04120
Ubiquitin mediated proteolysis
Brite
Ubiquitin system [BR:
gmh04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
115558612 (ddb1)
DNA repair and recombination proteins [BR:
gmh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
115558612 (ddb1)
TCR (transcription coupled repair) factors
Cul4-CSA complex
115558612 (ddb1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
115558612
NCBI-ProteinID:
XP_030232725
Ensembl:
ENSGMOG00000019386
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All DBs
Position
14:17099815..17150333
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AA seq
1140 aa
AA seq
DB search
MSYNYVVTAQKPTAVNACITGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK
IAVMELFRPKGESKDLLFILTSKYNACILEYKQNGESIDIITRAHGNVQDRVGRPSETGI
IGIVDPECRMIGLRLYDGLFKVIPLDRDNRELKAFNIRLEELQVIDVHFLYGCQAPTVCF
IYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIPVPEPFGGAIIIGQESITYH
NGDKYLAIAPPTIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEELMDGAVVLKDL
HVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNDQGSYVGVMETFTNLGPIV
DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSEPGRD
TDDMLVLSFVGQTRVLMLSGEEVEETELPGFVDNQQTFYCGNVAHQQLIQITSGSVRLVL
QESKALVSEWKEPQGRNISVAACNHTQVVLAVGRALFYLQILAGELKQIGTTLMEHEVAC
LDITPLGEAGDQSPLCAVGLWTDISARVLKLPCFTTLHKEMLGGEIIPRSILMTTFEGSY
YLLCALGDGALFYFGLDLQTGLLRERKKVTLGTQPTVLRTFRSLSTSNVFACSDRPTVIY
SSNHKLVFSNVNLKEVNYMCPLNSEGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYES
PRRICYQEVSQCFGVLSSRVEVQDVNGTTSAVRPSASTQALSSSVSSSKLFPSSTSPHEV
SFGEEVEVHSLLVVDQHTFEVLHAHQFLPSEYALSMVSCRLGRDTSVYFVVGTAMVYPEE
AEPKQGRIIVFHYTDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELR
TECNHYNNIMALYLKNKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEIL
DDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGVFHLGEFVNVFSHGSLVLQNLGES
STPTQGSVLFGTVNGMIGLVTSLSESWYSLLLDLQNRLNKVIKSVGKIEHSFWRSFHTER
KTEQATGFIDGDLIESFLDLGRTKMQEVVNTLQIDDGSGMKREATVDEVIKIVEELTRIH
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacaactacgttgtaaccgctcaaaaacctacggcagtcaatgcctgcatcaca
ggtcacttcacctctgcagaggacctcaatctgctcatagccaagaacacacggctggag
atctatgtggtgacagcagagggactcaggcctgtcaaggaggtaggcatgtacggcaag
atcgctgtcatggaactcttcaggccaaagggtgaaagtaaggacctgttatttatcctc
acatcaaagtacaacgcctgcatcctagaatacaaacagaatggcgagagtattgacatt
atcacccgtgcccatggaaatgtgcaggaccgtgtgggacggccctctgagacgggcatc
atcggtatcgtggaccctgagtgtcgcatgattggcctgcggctctacgatggcctcttc
aaggtaatccctctggaccgggacaaccgcgagctcaaggccttcaacatccgcctggag
gagctgcaggtcattgacgtgcacttcctctacggctgtcaggccccgacggtctgcttc
atctaccaggacccacagggacggcacgttaagacctatgaagtttccctcagagagaag
gagttcaacaagggcccgtggaaacaggagaatgtggaggcagaggcgtccatggtcatc
ccagtgccagagccatttgggggtgctataatcattggacaagaatcaatcacttatcac
aatggggacaaatacttggccatagctcctcctaccatcaagcaaagcaccatagtgtgt
cacaaccgagtggaccccaacggctcacgctacctgctgggggacatggaaggccggctg
ttcatgctgctcctggagaaggaggagctgatggacggggcagtggtcctcaaagacctc
cacgtggagctgctaggagagacgtccatcgcagagtgtctgacatacctggataacgga
gtggtgtttgtgggctcaagactcggggactcccagctagtgaagctgaacgtcgacagc
aacgaccagggttcctacgtgggggtgatggagaccttcaccaacctggggcccattgtg
gacatgtgcgttgtggacttggagcggcagggccaaggccagttggtgacctgctcgggt
gcgttcaaggagggctcgctcagaatcatccgcaacgggattggcatccacgaacacgcc
agcattgacctgccgggaatcaaaggtctgtggccgctgcgctcagagcctggccgagac
accgacgatatgctggtgctgtctttcgtgggacagactcgagtgttgatgcttagcgga
gaggaggtggaggagacggagcttccaggcttcgttgacaaccagcagaccttctactgt
ggaaatgttgcacatcagcagcttatccagataacgtcgggctcggtgcgtctggtgctg
caggagagcaaggcgctggtcagcgagtggaaggagccccagggcaggaacatcagcgtg
gccgcctgcaaccacacccaggtggtgctggccgtcggccgcgccctcttctacctccag
atcctggctggggagctcaaacagataggcaccacattgatggagcatgaggtggcctgt
ctcgacatcacccccctgggggaggctggcgaccagtcccccctctgcgcagttgggctg
tggacggacatctcagcgcgggtgctaaagctgccctgcttcacgaccctccacaaggag
atgctgggaggagaaatcatcccccgttccatcctcatgaccaccttcgagggcagctac
tacctgctctgcgctctcggggatggagcactcttctactttggtctggacctgcagacg
ggcctgctgcgcgagcgcaagaaggtgaccctgggcacccagcctacagtgctgcgcacc
ttccgctcactgtccacctccaacgtgtttgcctgctccgaccggcccaccgtcatttac
tcctccaaccacaagctggtgttctccaacgtcaacctcaaggaggtcaactacatgtgc
ccgctcaactcggagggatacccagacagtttggctctggccaataacagcaccttgact
atcgggaccatagacgagatccagaaactccacatacggacggttcccctctatgagtct
cccagacgtatctgctaccaggaggtgtcgcagtgtttcggggtgctgtccagcagggtt
gaggtgcaggatgttaacggcacaacgtctgctgtccggcccagtgccagcactcaggct
ctctccagcagcgtgagctccagcaagctgttccccagcagcacttcgccccacgaggtc
tcctttggggaggaggttgaggtccacagtctgctggttgtggatcagcacacctttgaa
gtgctccacgcccaccagttcctgcccagcgagtacgccctcagcatggtctcctgccgc
ctcggacgggacacctccgtttactttgtggtgggcacagccatggtgtaccccgaggag
gccgagccgaagcagggccgcatcatcgtcttccactacactgacggcaagctgcagact
gtggctgagaaggaggtgaagggggctgtgtactccatggtggagttcaacggcaaactg
cttgccagcatcaacagcacagtgcgtctgtacgagtggacggcagagaaggagctgcgc
acggagtgcaaccactacaacaacatcatggccctctacctgaagaacaaaggggacttc
atcctggtgggggacctgatgaggtccgttctcctgctggcctacaaacccatggagggc
aactttgaagagattgcccgtgactttaatccaaattggatgagtgccgtggagatcctg
gatgatgacaacttcctgggggcggagaatgcgttcaacctgtttgtgtgtcagaaggac
agcgcggccaccacagacgaggagcggcagcacctccaggaggtgggggtcttccacctt
ggggagttcgtcaacgtgttctcccacgggtcgctggtgctgcagaacctgggggagagc
tccacgcccacccagggctccgtgctcttcggcaccgtcaacggcatgataggcctggtg
acgtccctgtcggagagctggtacagcctcctactggacctacagaaccgcctcaacaag
gtcatcaagagcgtgggcaagattgaacacagcttctggaggtcgttccacacagagcgc
aaaacagagcaggccacggggttcatcgatggggacctgatcgagagcttcttggacctg
ggccgcaccaagatgcaggaagtggtcaatactctgcagatcgatgacggcagcggcatg
aagcgtgaagccacagtggacgaggtgatcaagatcgtagaagagctgaccaggatccat
tag
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