Gadus morhua (Atlantic cod): 115558725
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Entry
115558725 CDS
T10832
Symbol
tp53bp1
Name
(RefSeq) TP53-binding protein 1 isoform X1
KO
K20915
tumor suppressor p53-binding protein 1
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
115558725 (tp53bp1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
53-BP1_Tudor
BRCT_3
Tudor_5
BRCT_2
RTT107_BRCT_5
Tudor_3
SH3_Hsr9
DUF4537
BAHCC1-like_Tudor
Motif
Other DBs
NCBI-GeneID:
115558725
NCBI-ProteinID:
XP_030232984
Ensembl:
ENSGMOG00000034519
UniProt:
A0A8C5CEF0
LinkDB
All DBs
Position
14:complement(4581167..4605595)
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AA seq
1752 aa
AA seq
DB search
MDPGGRELESSLPLHENPCLIVEDSQPDGVALDDDPESSYRALLSRRLSHLQPAAHSPVL
ELIASPAGSRCSQTTDSQSEVAPSNCGPAPEGESQVINICPLPNKAKCPSVDVNMDSGAD
STTHCPQPEEGQSQFAGLELSESQGPGAGGRDSQQQDKEAVLSQTEQERHSQQADQKIST
GGSADQDLKSARSEVSSSSSSEPCGQTDRALRAQALLHSQGRSVTGSHGDDDILSSQEDM
FDAEKTGTAVDSTVADNQTHPTLTPAHTLGLLHFSGQGTLVQETLSQNSTDCVAPTPEHF
SQAPLIVPNSPTNPECNMDADEPMDTSQPPEDQSMEREGGPSQIAAFSKPLPKASTPLSQ
NSPSFVLDRTLSMPSQPEFSHDVFAPTPSPEGGSCSGVAASQEPQGAAKAAPPSPSLPRD
KPPPAPEPPAFTLALQLTVNTQSAVDQPPPPPEQQEEEEDSQATQIEEPLCVDESQSVRC
SQRSDHGAAASSQRNAAAVAAGPDVVPAGSQRRSLDRAAGEDDSRPSQKSDAPARAAVGS
VNVAEGGGGTKEESGPRPRPTADSGAAAERPLNAAPCTVSAQPALPQAADGVNVAKGPGN
AAEPKAAAAGKTPPLPPSRQDGAPSDNRQNNRETLSAGGEEEEEEEESMEEEEVTIGRDG
SALGLALSQSQLPSPEPMEEEEESRGGKDEGVTDGLQRLSERHSQASQQSKSAGSQPACS
KVSTNGHRVHPQTNDSQVTPDRLSQKDRAGPEADGPKDKSLSDSSGEIPFNFTLPKEGDL
IGPAVVATPPLVNQLKQTPRHSTPIEINSFSEKPPAVGDVSAATSDIVAEESGEEGPEKE
GGKLSLRMRLVTPVEEGSSERFSLQKPSLSEEDASVVKVTTVAKAVTSSSVFSRVRQVHR
QVGATEEEARFTTTTTTPSTRSDIHTSPLRSSQSSSLGCNSLPNSQSEPSSCPSQEALAD
PLARADTDPKVGGVAAGVEGPGHTPGPSTPHRPGAALRTAGTPQSRFDHAAFRTPSSKRT
ISQQTSFDGPLLRSPTGRPYAESPPFQRAAAPSHRRHVRTTQEVRTTVTRIITDVYYEDG
KEVDRKVTEENEEPVVDCQVLDSDLSPCRTASSMTSGDLGDVSSLSSKLSGGTTGSGGTF
AMPPSRGGRASSPRRGGGPRPRGQRGQRAGSAAQRDRGEGPPLAPALVPLPSRGRARRGR
PPSRSSLTRGAAWSAMQRVSGAGPPGQHQLSSSEEEPPPAFARVRLPVSPPDAAPPSLSD
SLRSSPEQAGSAGGGGSSFVGLRVVAKWSSNAYFYPGRITKDAGEGRFGLRFDDGYECEV
SGGDILLCDPVPAGTEVTALLEEEYFSVGVVKGHKTEGQELYYSVEREGQSQWHSRSSVI
LSLEQGNRLREQHSLGPYEPASPLAKASDISLDNLVEGKRRRRGGAGGQGTPTAISSGNP
RTPGPSGKRKLMSSTEERTPAKRGRRGGGGGRAAQRLGVCNTSGSGTDLPAGSGDMEGTH
GPLPQNASLFLGFAFMLTASSETDRLTNKLAGNDDEEYVQTAPYNKGYTESQLQAGGGFV
LLDFNEEQCKAAYQSLLIADQHCRTRKYLLCVASGVPCVSHIWVHDCCKDNKLLNYRNYL
LPAGMGPDEQIVEWHPRCKPFEALRVLLVFGESEELWVQLLTLSGALTVRHYQAEKDGSD
IPAGKFDVVVTDGDCPLPVEKSAASQKLPLVSAEWLIQSLICGERLGYRSKPQYQHDYSS
STTTTLSSSTSS
NT seq
5259 nt
NT seq
+upstream
nt +downstream
nt
atggatcctggcggaagagaactggaatcaagtttacctctgcacgagaacccgtgcctg
atcgtggaagactcccagccggacggtgttgccctagacgacgacccagaaagcagctac
cgtgctctgctgtcccgcagactgtcccacctgcagcccgctgcccacagtcctgttctg
gaactgatcgcttcaccggcaggaagcagatgctctcagacaaccgacagccaatcagag
gtagccccgagcaattgtggtccagcccccgaaggggagagtcaagtcattaacatctgc
cctcttccaaacaaggcaaagtgtccgtcagtggacgtcaacatggactctggggctgat
tccaccactcactgccctcagcccgaagaggggcagtctcagtttgctggtctggagctc
tctgagagccagggcccgggagctggggggagagacagtcagcagcaggacaaggaggcg
gtcctttctcagacagagcaggagaggcacagccagcaagcggaccaaaagataagcacg
gggggttcggcagatcaagacctcaaatcagcacggtcggaggtgagctccagcagctca
tcggagccctgtggacagacggaccgagcgctgagagcccaggctctgctccactcccag
ggccgctcggttactggttcccatggcgacgatgatatcctgtcgtcgcaagaggacatg
tttgatgctgagaagacggggaccgcggtggacagcaccgtggcggacaaccagacacat
cccaccctgacgcccgcccacactctggggctgttgcatttctctggccagggcaccctg
gtgcaggagaccttgtcccagaactccacggactgcgtcgctcccacgccggaacacttc
agccaagctcctctcatcgtccccaactccccgaccaacccagagtgcaacatggatgca
gacgagccaatggatacgtctcagcctccagaggaccaatcgatggagagggagggcggg
ccctcgcagatagcagccttctccaagccactgcccaaagcctccacgcctctgtcccag
aattcccccagttttgttttggataggaccctgtcgatgccgtcccagccggaattctct
cacgatgtgttcgcccctacgcccagtccggagggcgggagctgctccggcgtcgcggcg
tctcaggagccacaaggcgccgccaaggccgcccctccgtccccctctctgccccgcgac
aagccccccccggccccggagccgcccgccttcacgctggccctgcagctcacggtgaac
acgcagagcgccgtggaccagccgccgccgccgccggagcagcaggaggaggaggaggac
agccaggccacgcagatcgaggagccgctctgcgtggacgagtcccagtccgtccgctgc
agtcagagaagcgaccacggcgccgctgcgtcctcccagcgcaacgccgccgccgtcgca
gccggtcccgacgtcgtccccgccgggtctcaaaggcggagcctcgatcgagcggccggc
gaggacgactcccgtccctcgcagaagtccgacgctccggccagggcggcggtggggagc
gtgaatgtagccgagggcggcggcgggaccaaagaggagagcgggcctcgccctcggccg
acggcggactccggggcggccgccgagcggcccctgaacgccgcgccttgtaccgtgtcc
gcccagcccgcgctgcctcaggcggccgacggtgtgaatgtagccaagggtccagggaac
gccgcagagccaaaggcagccgccgctgggaagactcctcccctgccgccgagccggcag
gacggggcccccagcgacaaccgccaaaataacagagagaccctcagtgctggtggagag
gaggaggaggaggaggaagagtcgatggaggaagaggaggtcaccatcgggcgggacggc
tcggcgctgggcctggcgctctcccagagccagctgccctcccctgagccaatggaggag
gaggaggagagtcggggcgggaaagacgaaggtgtcactgatggcctccagaggttgagt
gaaagacattcccaggcgtcgcagcagtccaagagcgccggctcgcagcccgcctgcagc
aaagtctccaccaatggccaccgggtgcatcctcagaccaacgactcgcaggtgactcct
gataggctgtcccagaaggatagggcggggcctgaggcagacggtcccaaagacaagagc
ttgagtgacagctctggagaaattccattcaacttcacccttcctaaagagggggatctg
attggaccagctgttgtagccactccccctctggtcaaccagctgaagcagacgcctcga
cacagcactcccattgagatcaactcgttttcagagaagccccccgcggtgggcgacgtc
tccgcggcgaccagcgacatcgtggccgaggagagcggggaggaggggccggagaaggag
gggggcaagctgagtctgcggatgaggctggtgaccccggtggaggagggcagctcggag
cgcttcagcctgcagaagccctcactatcggaagaggacgcatctgtcgtcaaggttacc
actgttgccaaggccgttaccagctcgtccgtgttcagtcgcgtcagacaggtccacagg
caggtgggggcgacggaggaggaggctcgcttcaccaccaccaccaccaccccctccacc
aggtctgacatccatacctccccactgaggagctcccagtcctcttcactgggctgcaac
agcctccccaacagccaatcagagccgtcctcgtgcccgagtcaggaagcactggccgac
ccgctggccagagcggacaccgaccccaaggtgggcggtgtcgcagcaggcgtggagggc
cccggccacaccccggggccctccacgccgcaccggccgggggccgcgctcaggaccgcc
ggaaccccgcagagccgcttcgaccacgccgccttccgcactccgtccagcaagaggacg
atctctcagcagaccagcttcgacggacctctccttcgctcccctacgggcaggccctac
gcggagtccccccccttccaacgggccgcggccccctcccaccgcagacacgtgcgcacc
acccaggaagtgaggaccactgtcacccgcatcatcacagacgtgtactacgaggacggc
aaggaggtggatcgcaaggtcaccgaggagaacgaggagcccgtggtggactgccaggtg
ctggacagcgacctctccccctgccgcacggccagctccatgacgtcgggggacctgggc
gacgtcagctccctgtcctctaagctctcggggggcaccacgggcagcggcggcaccttc
gccatgccccccagcaggggtggccgggcctccagccccagaaggggaggcgggccacgg
ccccggggccagaggggtcagagggcggggtcggctgcacagagggaccgcggcgaaggc
cctccgctggccccagccctggtcccgctaccctccagaggaagggcgaggagaggccgg
ccgccgtcccgctcctccctgaccaggggcgctgcgtggagcgccatgcagagggtgtcc
ggcgccggcccgccgggacagcatcagctctcgtcttcggaggaggagccgccgccggcc
ttcgcccgcgtgcgcctccccgtcagccccccggacgccgcgccgcccagcctctcggac
tcgctgcggtcgtcccccgagcaggccggctcggcgggcggcggcggcagcagcttcgtg
gggctgcgcgtggtcgccaagtggtcgtccaacgcctacttctacccgggccgcatcacc
aaggacgcgggcgaggggcgcttcggcctgcgcttcgacgacggctacgagtgcgaggtg
tcgggcggcgacatcctgctgtgcgaccccgtgcccgcgggcacggaggtgacggcgctg
ctggaggaggagtacttcagcgtgggcgtggtgaagggccacaagacagagggccaggag
ctgtactacagcgtggagcgcgagggccagagccagtggcacagccgcagctcggtcatc
ctgtccctggagcagggcaaccggctgagggagcagcacagcctggggccctacgagccc
gccagcccgctggccaaggcctccgacatcagcctggacaacctggtggaggggaagagg
aggcgcaggggcggcgccgggggccaggggacccccacggccatctcctccggcaacccc
cgcaccccggggccctccgggaagaggaagctgatgagctccacggaggagaggaccccc
gccaagagggggcgccgcggtggcggggggggcagagcggctcagcgcctcggcgtgtgc
aacacgtcgggcagcggcacggacctgccggcgggctccggggacatggaggggacgcac
gggcccctgccccagaacgcctctctcttcctgggcttcgccttcatgctgaccgcctcc
tccgagacggaccgcctcaccaacaagctggcaggcaacgacgacgaagagtacgtgcag
acggccccatataacaaaggctacacggagtctcagctgcaggcagggggaggtttcgtc
ctcctggacttcaacgaagaacagtgcaaggcggcctaccagagcctgctgatcgctgac
cagcactgccgcaccaggaagtacctgctgtgcgtggccagcggcgtgccctgcgtctcg
cacatctgggtgcacgactgctgcaaggacaacaagctgctgaactacaggaactacctg
ctgccggctggtatgggccccgacgaacagatcgtggaatggcacccgcgctgcaagccc
tttgaggccctgagggtgctgctggtgttcggggagtcagaggagctgtgggtccagctg
ctcaccttgagtggagccctgaccgtccgacactaccaggccgagaaggacggctccgac
atccctgcgggcaagttcgacgtggtggtgactgacggagactgccccctgccggtggag
aagagcgctgcgtcccagaagctgccgctggtgtccgccgagtggctcatccagagcctg
atctgcggcgagcggctgggctaccgcagcaagccccagtatcaacatgactactcgtcg
tcaacaacaacaacattgtcgtcgtccacctcatcgtaa
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