Gadus morhua (Atlantic cod): 115558901
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Entry
115558901 CDS
T10832
Symbol
myo5a
Name
(RefSeq) unconventional myosin-Va isoform X1
KO
K10357
myosin V
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
115558901 (myo5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmh03019
]
115558901 (myo5a)
04131 Membrane trafficking [BR:
gmh04131
]
115558901 (myo5a)
03029 Mitochondrial biogenesis [BR:
gmh03029
]
115558901 (myo5a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gmh04812
]
115558901 (myo5a)
Messenger RNA biogenesis [BR:
gmh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
115558901 (myo5a)
mRNA cycle factors
P-body specific factors
115558901 (myo5a)
Membrane trafficking [BR:
gmh04131
]
Others
Actin-binding proteins
Myosins
115558901 (myo5a)
Mitochondrial biogenesis [BR:
gmh03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
115558901 (myo5a)
Cytoskeleton proteins [BR:
gmh04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
115558901 (myo5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
AAA_22
nSTAND3
AAA_16
HTH_17
Myosin_N
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
115558901
NCBI-ProteinID:
XP_030233298
Ensembl:
ENSGMOG00000015730
LinkDB
All DBs
Position
14:complement(23194388..23260480)
Genome browser
AA seq
1859 aa
AA seq
DB search
MNQELYYMFVKLARVWIPDAEEVWKSAALTKNYEDGDGSLQLALEDGTNLEHKLDPKTKN
LPYLRNPDILVGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYESLPI
YGSDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMR
YFATVSGTTSEANVEQKVLASNPIMEAIGNAKTTRNDNSSRFGKYIEIGFDPRYRIIGAN
MRTYLLEKSRVVFQADEERNYHIFYQLCASAHLPELKDLRLGSANDFLYTRQGRSPVIEG
VDDTKELSTTRHAFTLLGVNESYQMGLFQVLAAILHLGNVEVKDRDSDSSVIPPNNSHLT
AFCELVGVSYQDMSHWLCHRKLRTATETYIKTVPRLQAVNSRDALAKHVYAKLFSWIVEH
VNKALVTNIKQRSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYM
REEIPWTLIDFYDNQPCINLIEAKMGVLDLLDEECKMPKGSDESWAQKLYNTHLKTCSLF
QKPRLSNRAFIIQHFADKVEYQCEGFLEKNKDTVNEEQINVLKASKKFPLLVELFQDGEK
AVSPTGQPQGAGGRTRLSVKPDKGRTSSREHKKTVGCQFRNSLQMLMDTLNATTPHYVRC
IKPNDFKLAFSFDPMRAVQQLRACGVLETIRISAAGFPSRWTYQEFYSRYRVLMKQKDVL
QDKRLTCRNVLEFLVQDQDKYQFGKTKIFFRAGQVAYLEKLRSDKLRVACVRIQKTIRCW
LARKKFLRQRRSAITIQRFTRGFQARCLAKFMRRTSAATTIQKYQRMCVARRRYRQKQAA
ALAMQTILRAYMARQKYRALLRESKAVVIQKHARGLLARRRFKRCLRAIVYLQCCLRRMR
ARWELKKLKIEARSVEHFKKLNIGMENKIMQLQRRIDEQNNNHRATVDKLATLEAGHAAD
SERMRVEVTRLRGVEEDARNNANRANSLQGELERLKKELATTQKEKKTIEDWATKYRDEM
EKMVSELKSQNGLLKSEKDDLNRMIQEQRQQMTEQMARAIAEETQQLETDLNEERSRYQN
LLTEHLRLEEKHDDLKEEMALSSNTSRPGHRRTDSTHSSNESEYTYNSEYAEADEGSRVS
EVDGGRAHMDSGRGMDTNLTLKLQKRLGELEQDKQQLRDELENKEELFQRARARDDVEHK
KARGAELEYESLKRQELESENKKLKHNLAEMRQSLLGNQATGAGAPGSPAYKVLLDQLNS
SSEELDVRKEEVLILRSQLVSQKEATHHKDEKETMTEPTHHVVDVSKLKDTDEIKQAYVG
LKDTNRLLESQLQAQRRSYDNETEGLRSELQNVKEENNRQQQLLAQNLQLPPEARIEASL
QHEITRLTNENLEILTDNQDPTASREARVTILRRMVDLMEQLEKQDKTIRKLKKQLKVYS
KRIGEMGVGQTEGQTSPGQMVDEPVRAVSIPRREKDFQGMLEYKRQDELKLVKNLILELK
PRGVAVNLIPGLPAYILFMCLRHADYVNDDEKVRTLLASTINCIKKILKKRGDDFETVSF
WLANTCRFLHCLKQYSGDEVFMKHNSARQNEHCLSNFDLAEYRQVISDLAIQIYQQLIKC
MENILQAMIVSGMLEHETIQGVSGVKPTGLRKRTSSIADEGMYTLESILRQLGAFHSTMC
QHGTDPELIKQVVKQQFYIIGAVTLNNLLLRKDMCSWSKGMQIRYNVSQLEEWLRDKNLM
ACGAKETLEPLIQAAQLLQVKKKTDEDAEAICSMCHALTTAQIVKVLNLYTPVNEFEERV
SVSFIRTIQTRLRGRCESPQLLMDTKVIYPVTFPFNPSALALETIQIPSSLNLGFLVRV
NT seq
5580 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaggaattgtattatatgttcgtaaaattggctcgggtgtggatacctgatgca
gaggaggtctggaagtcggctgcgctcaccaagaactacgaagatggcgacggctccctg
cagcttgccctggaagatggaacgaacttggagcataagctggaccccaagacgaagaac
ctgccctacctccggaacccggacatcctggtgggcgagaacgacctcacggcgctcagc
tacctgcacgagcccgccgtgctccacaacctcaaagtgcgcttcatcgactccaagctc
atctacacctactgcggcatcgtgctggtggccatcaacccctatgagtctctgcccatc
tacggctctgacatcatcaacgcctacagcgggcagaacatgggagacatggacccacac
atattcgccgtggcagaggaggcctacaagcagatggccagggacgagcggaaccagtcg
atcatcgtgagcggggagtcgggcgcggggaagacggtgtcggccaagtacgccatgagg
tacttcgccacggtcagcggcaccaccagtgaggccaacgtggagcagaaggtgctggcc
tccaaccccatcatggaggccataggaaacgccaagacgaccaggaacgacaacagcagt
cgcttcggcaagtacatcgagatcggcttcgacccgcgctaccgcatcatcggcgccaac
atgaggacctacctgctggagaagtcccgcgtggtgttccaggcggacgaggagaggaac
taccacatcttctaccagctgtgtgcttcggctcacctgcctgaactcaaggatctgcgt
ctgggaagtgccaacgacttcctgtacactcggcagggccgcagccccgtcatcgagggc
gtggacgacaccaaggagctgagcaccacgcggcacgccttcacgctgctgggggtgaac
gagtcctaccagatggggttgttccaggtcctggctgccatcctgcaccttggcaacgtg
gaggtgaaggaccgggactctgacagcagcgtcatcccgcccaacaacagccacctcacg
gccttctgcgagctggtaggcgtgtcctaccaggacatgtcccattggctgtgccacagg
aagttgcggacggccacggagacctacatcaagacggtgccgcggctgcaggcggtgaac
tcccgcgacgcgctcgccaagcacgtgtacgccaagctgttcagctggatcgtggagcac
gtcaacaaggcgctggtcaccaacatcaagcagaggtccttcatcggcgtcctggacatc
tacgggtttgagacctttgagatcaacagcttcgagcagttctgcatcaactacgccaac
gagaagcttcagcagcagttcaacatgcatgtgtttaagctggagcaggaggagtacatg
agggaggagattccgtggacgctgatcgacttctacgacaaccagccgtgcatcaacctg
atcgaggccaagatgggcgtcctggacctgttggacgaggagtgcaagatgccaaagggt
tcggacgagtcgtgggcccagaagctgtacaacacccacctgaagacctgctcgctgttc
cagaagcctcgcctgtccaaccgggccttcatcatccagcacttcgctgacaaggtggag
taccagtgcgagggtttcctagagaagaacaaagacacagtgaatgaggagcagataaac
gtgttgaaggccagcaagaagttccccctgctggtggagctgttccaggacggggagaag
gcggtcagtccgacgggccagccgcagggcgctggggggcgcacccggctcagtgtcaag
cccgacaagggccggacctccagcagggagcacaagaagacagtgggctgccagttccgg
aactctcttcagatgctgatggacacgctgaacgccacgaccccccactacgtccgctgc
atcaagcccaacgacttcaagctggccttctcgttcgaccccatgcgggccgtccagcag
ctccgcgcctgtggagtcctggagaccatccgcatctctgcagccggcttcccctccagg
tggacctaccaggagttctacagccgttaccgggtgctgatgaagcagaaggacgttctt
caggacaagaggctgacctgcaggaatgttctggaattcctcgttcaggaccaggacaag
taccagttcggtaagaccaagatcttcttccgggcgggccaggtggcctacctggagaag
ctgcgctcggacaagctgcgcgtggcttgtgtccgcatccagaagaccatccgctgctgg
ctggcccgcaagaagttcctccgccagcgccgctcggccatcaccatccagaggttcacc
cggggcttccaggcccgctgcctggccaagttcatgcgtcgcacctcggcagccaccacc
atccagaagtaccagaggatgtgtgtggcgcgccggcgctacagacagaagcaggccgcc
gccctggccatgcagaccatcctgagggcctacatggcccggcagaagtaccgagcgctg
ctacgggagagcaaggcggtggtgatccagaagcacgcccgcggcctgttggcgcgccgc
cgcttcaagcgctgcctgcgggccatcgtgtacctgcagtgctgcctgcgccggatgcgc
gcccgctgggagctgaagaagctgaagatcgaggcgcgctccgtggagcacttcaagaag
ctcaacatcggcatggagaacaagatcatgcagctgcagcgccgcatcgacgagcagaac
aacaaccaccgtgccaccgtggacaagctggcgacgctggaggccggccacgcggcggac
agcgagcgcatgcgcgtcgaggtgacgcggctccgcggcgtcgaggaggacgcccgcaac
aacgccaaccgggccaacagcctgcagggggagctggagaggctgaagaaggagctggcc
accacgcagaaggagaagaagaccatcgaggactgggccaccaagtaccgcgacgagatg
gagaagatggtctccgagctgaagtctcagaatggattgctgaagtcggagaaggacgac
ttgaacaggatgattcaggaacagcgtcaacagatgacggagcaaatggcgcgagcgata
gcggaggagacgcagcagctggagacggacctgaacgaggagcgctcccgctaccagaac
ctcctgacggagcacctgcgcctcgaggagaagcacgacgacctcaaggaggagatggct
ctgtcctcgaacaccagcaggcccggccacagaagaacagactccacccacagcagcaac
gaatcagagtacacctacaactccgagtacgccgaggcggacgaaggctcccgcgtctcg
gaggtagacggcgggcgggctcacatggactcgggccgtggcatggacaccaacctgacc
ctgaagctgcagaagcgtctgggggagctggagcaggacaagcagcagctccgcgacgag
ctggagaacaaggaggagctgttccagcgggctagagcccgggacgacgtggagcataag
aaggctcgcggagccgagctggagtacgaatccctcaagcgccaggagctagagtcggag
aacaagaagctgaagcacaacctggcggagatgaggcagagcctcctgggtaaccaggcc
acgggggccggggccccgggctccccggcctacaaggtgctgctggatcagctcaactcc
tcctccgaggagctggacgtccgcaaggaggaggtgctgatcctgcgctcccagctggtc
agccagaaggaggccacgcatcacaaggatgagaaggagaccatgacagaacctactcac
catgtggtggatgtgtccaagctgaaagacactgacgaaatcaagcaggcttacgttggc
ctcaaagatacgaacaggctgctggagagccagttgcaggcgcagcggcgtagctatgac
aacgagacggaggggctgcgcagcgagctgcagaacgtcaaggaggaaaacaaccggcag
cagcagctgctggcccagaacctgcagctgcctccggaggctcgcatcgaagccagcctg
cagcacgagatcaccaggctcaccaacgagaacctggagatcttgaccgacaaccaagac
cccacagcatcccgagaggcgcgggtcaccattttgcgacggatggttgacctgatggag
cagttggagaagcaggataaaaccatccggaagctcaagaagcagctgaaggtttactcc
aagcggatcggagagatgggagtggggcagacagagggccagacctccccaggccagatg
gtggatgagccggtccgagcagtcagcatcccccgcagggagaaggacttccagggaatg
ctggagtacaagaggcaggatgagctgaagctggtcaagaacctcatcctagagctgaag
ccacggggcgtggccgtgaacctgatcccagggctgcccgcctacatcctgtttatgtgt
ctgcggcacgccgactacgtcaacgacgacgagaaggtccgcacgctgctggcctccacc
atcaactgtatcaagaagatcctcaagaaacggggcgatgactttgagacggtttccttc
tggttggccaacacctgccgcttcctgcactgcctcaaacagtacagcggagatgaggtc
ttcatgaaacacaacagcgcgaggcagaatgaacactgcctgtctaacttcgacctggcc
gagtaccgacaggtgatcagtgacctggccatccagatctaccagcagctcatcaagtgc
atggagaacatcctacaggccatgatcgtgtccggcatgctggagcacgagaccatccag
ggcgtgtcgggggtgaagcccaccggcctccgcaagcgcacctccagcatcgcggacgag
ggcatgtacacgctggagtccatcctgcggcagctgggcgcattccactccaccatgtgc
cagcacggcaccgaccccgagctcatcaagcaggtggtcaagcagcagttctacatcatc
ggcgccgtcaccctcaacaacctgctgctgcgcaaggacatgtgctcctggagcaagggc
atgcagatcaggtacaacgtgagccagctggaggagtggctgcgggacaagaacctgatg
gcgtgcggcgccaaggagaccctggagccgctgatccaggccgcccagctgctgcaggtc
aagaagaagacggacgaggacgccgaggccatctgctccatgtgccacgccctcaccacc
gcccagatcgtgaaggtgctgaacctgtacaccccggtcaacgagttcgaggagagggtg
tccgtgtccttcatcaggaccatccagacccgtttgcgcggccgctgcgagtcgccccag
ctgctcatggacaccaaggtcatctacccggtgaccttccccttcaacccctccgccctg
gccctggagaccatccagatccccagctccctcaacctgggcttcctggtccgggtctag
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integrated database retrieval system
