Gadus morhua (Atlantic cod): 115558903
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Entry
115558903 CDS
T10832
Symbol
slc6a5
Name
(RefSeq) LOW QUALITY PROTEIN: sodium- and chloride-dependent glycine transporter 2
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
115558903 (slc6a5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gmh02000
]
115558903 (slc6a5)
Transporters [BR:
gmh02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
115558903 (slc6a5)
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
115558903
NCBI-ProteinID:
XP_030233314
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Position
14:complement(3674503..3696282)
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AA seq
869 aa
AA seq
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MGSERMTLNTPPLTRRTETQVEMAFYVFFQRWPLSGPALTFSQGPLSRRPQTDGNLIGFD
REESDSGSDPLITRSPDYSEQRDMSKAPAPPGPTATPPSLQPDGAVGLTAKKPELCASSH
HSHPAPQPPPGAEGQTFCPTADNKLGEAETTKVYGTFKNAAPAVPGSVAFRKDSCGSTGA
LLGGSTSASQGRGTAVHYGDPLRSDTDQNNASSNWTAMSQTTIILGTDGNTSVQPVALAN
NDDDDEEGDENKERGNWTNKMDFILSMVGYAVGLGNVWRFPYLAFQNGGGAFLIPYLTML
GIAGIPIFLMEVSLGQFASQGPVSVWKAIPALQGCGIAMLIISVLIAIYYNIIMCWTLYY
LFASLKGSLPWANCRNDWNTVECKDKDMLLLDSCQSTPASSADRNFFIRKEHFFCLSANA
VGNLTKTASNTTVDPNQTXVSPSEEYFKYNVLHISKGIEFPGDIRWALAGCLFLAWVIVY
ASLAKGIKSSGKVVYFTATFPYVVLVILLIRGLTLPGAGDGILYFITPKWEKLIDAKVWK
DAATQIFFSLSAAWGGLITLSSYNKFHNNCYRDTIIVTCTNSATSIFAGFVIFSVIGFMA
HELKVPIEKVADEGPGIAFVVYPEALTRLPLSPFWAIIFFLMLLTLGLDTMFATIETIVT
SVSDEFPKYLRKNKPLFTLICCLCFFFLGFPMITESGMYMLQLVDTFAASYSLVIIAICE
LLGVSYLYGLQRFCEDIEMMIGFQPNRFWRICWAFVTPTILTGILGLSLYQWKGMTYEDY
TYPGWSMAMGWLMVICSVIWIPIMFFIKMYLAPGSFSERLKLVCSPQPXWGPFLQKHRGX
RYKNMMDPXGTNSLGLKLPPKDFQLGTYQ
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atggggtctgagaggatgactctgaatactccacctttaacccgtaggactgaaacacag
gtggagatggcattctacgtgttcttccagagatggccgctgtcgggccccgctctgacc
ttcagccaggggccgctctcgagacgcccacagacggatgggaatctcatcggcttcgat
cgagaggagagcgacagcggcagcgatccattaattacacggtctcctgattactccgag
cagagagacatgtccaaagccccggccccccccggcccgaccgctacacccccctcccta
cagcccgacggagccgtgggacttacggcaaaaaaaccagagctgtgcgcctcgtcccac
cactcgcacccagcgccccagccgccccccggcgccgagggccaaactttttgtccgacg
gcggataataaactcggggaagccgagactaccaaagtgtatgggacgtttaaaaacgcg
gcgccggcggtgcccggctccgtggccttccggaaggactcctgcggctccaccggggct
ttgctcgggggctcaacgtcagcctcccagggccgggggacggcggtccattatggggac
ccgttacgcagcgacacggatcaaaacaacgcgtcgagcaactggactgcgatgagccag
accaccatcatcctgggcacggatggcaacacgtctgtgcagcccgtggcgttggctaac
aatgatgacgatgatgaagagggggatgagaataaggaaagaggaaactggaccaataag
atggattttattctgtccatggtgggttacgcggtgggcctggggaacgtctggaggttc
ccctatctggcctttcagaatggtggaggtgcatttttgataccctatttgactatgctg
ggcattgccgggatccccatctttttgatggaggtttccctcggccagtttgccagtcag
ggccccgtgtcagtatggaaagccatcccggcactgcaaggttgcgggattgccatgttg
ataatatctgtcttgatagccatttactataatattataatgtgctggacactgtactac
ctattcgcttcgttgaagggctcactgccatgggctaactgtaggaatgactggaacaca
gtggaatgtaaggacaaagacatgctcctattagattcgtgtcaatcgacacctgcatcc
tccgccgacagaaactttttcatccgtaaagaacacttcttctgtctgtcggctaacgcg
gtcggaaacctgactaaaactgcctcaaacaccaccgtggaccccaaccagaccnttgtg
agccccagcgaggagtatttcaaatacaacgtactgcacatttccaaaggaattgagttt
cccggtgacatccgctgggccctggccgggtgcctgttcctggcctgggttattgtctac
gcctctttggctaagggaatcaagtcatccggaaaggtggtgtacttcacggccaccttc
ccctacgtggttctggtcatcctgctgatcaggggcctcacgctccccggggccggcgac
ggcatcctctacttcatcacccccaagtgggagaagctcatcgacgccaaggtgtggaag
gacgctgccacccagatcttcttctccctgtcggccgcgtggggaggccttatcactctc
tcctcctacaacaagttccacaacaactgctaccgggacactataatagtgacctgtaca
aacagcgccaccagtatatttgccggcttcgtcatcttctcagtcataggcttcatggcg
cacgagctgaaggtgccgatagagaaggtggcggacgaaggcccaggcatagcgttcgtg
gtttatcccgaggctctgacccgtctgcctctctcgccgttctgggccatcatcttcttc
ctcatgctgttgaccctcggactggataccatgtttgccaccatcgagaccatcgtgacg
tctgtctccgacgagttccccaaatacctgcgtaagaacaagcccctcttcactctcatc
tgctgcctctgcttcttctttctgggcttccccatgatcacggagagcgggatgtacatg
ctacagctggtcgacacgtttgctgcgtcttactctctggtgatcatcgccatctgtgag
ctgctgggcgtgtcttacctctacggtctgcagaggttttgtgaggacattgaaatgatg
attggtttccagccgaaccgcttctggagaatttgctgggcctttgtgactccgaccatc
ctgacgggcatcctggggctgagcctgtaccagtggaagggcatgacctacgaggactac
acctaccccggctggtccatggcgatgggctggctcatggtcatctgctccgtcatctgg
atccccatcatgttcttcatcaagatgtacctggcccccggctccttctccgagcgcctg
aagctggtgtgctccccgcagccgnactggggccccttcctgcagaagcaccgcgggnag
cgctacaagaacatgatggaccccntggggaccaactccctgggcctcaagctgcccccc
aaggacttccagctgggcacctaccagtag
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