Gadus morhua (Atlantic cod): 115558993
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Entry
115558993 CDS
T10832
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115558993
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmh03021
]
115558993
03036 Chromosome and associated proteins [BR:
gmh03036
]
115558993
Transcription machinery [BR:
gmh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
115558993
Coactivators
SAGA/TFTC/STAGA complex
115558993
Chromosome and associated proteins [BR:
gmh03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
115558993
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
TAF
Motif
Other DBs
NCBI-GeneID:
115558993
NCBI-ProteinID:
XP_030233438
LinkDB
All DBs
Position
14:complement(24549286..24622725)
Genome browser
AA seq
1001 aa
AA seq
DB search
MHSNTHAQCTKCFFFFFLYSNPRSEMAGASDPLEDMLFSEVDEKAVSDLVGSLESQLADS
QADTEGHTLLENRGNGSAGNTNHHLGKTLPARVGTTTLEQQQQQQQGGRHKAGVHPGTHC
KGISSEKPVRASPPSSPPPLDEASVTVVADQKANASSGSPPRDTSITTSNASALSTLAPS
RISISTAAPGPMVTALSPSGGTRPTNPPRKRATVASKRSASARIKSLTGGAVSTRRTSAG
ASASDLASPAAGCTSAANPILRAGTASCSRTPATVTLSNASSVPAAGQSCGALDRGTPTI
ALHRLPNHIVASIAQNGNGTTVSALVQQGARLGPITSPGVQLNHNAALTLNTSVSKTDES
HHKTAMASQSCNTSSVISTCSSSVVLTTAATLSSLTTAAGCAAGVATTLSGSGQTTAPNM
HTNTVRLAAPSAAPVGATPAAQCQPRPGLTAPPQRIVAPQQLIVRAPQPQTTIQLPSGFT
IPQGMVLVRTELGQLVMVPQQALAQAQAQNNLSPRPSTPTTGPSFRAPGPQKGPVAPAVA
VTAPQQAPASGAPQARAAAPASRPAQPPQTAVAVAPGGPAVAQEMQDNVKKCKNFLATLI
KLASHNSPSPETSKNVKSLVQDLLDAKIEPEEFTSRLQAELKSSPQPYLVPFLKKSLPAL
RLSLLSSQHSVPTPQQGVKPGVYPGPPVAGGAAVRVHYPNSVGPATGAGGLAAAHTAGVG
MKRGGVSGGQVRTPVATPCMRAQGALCKGLVGAQTGRGPAGMGPPGSGNQKNKPNDPGGG
SFRDDDDINDVASMAGVNLNEESARILATNSELVGTHIRSCKDEAFLHPGLLHRRILEAA
KRFGVTEVPMDSVTFISHAAQARLRTVLETVSSIAQHRLDSCKDEEWYEPSADVRSQLRF
FEQLERMEKQRKDEQEREILLKAAKSRARLEDPEQARLKQKAKEMQQHELAQTRQREANL
TALAAIGPRKKRKMDSAWATASGSEVRGPSTSGRRKSFLMR
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgcatagtaacacgcacgcgcaatgtacaaaatgttttttttttttttttttgtacagc
aatcctcgatcagagatggcgggcgcctcagaccccctggaagatatgctcttttcagag
gtggacgagaaagcagtgagcgatttggtgggatctctggagtcacaactagccgacagc
caagccgacacagagggacacacacttctggagaacagaggcaacggctcagctggcaac
acgaaccatcacttggggaaaacgttaccagctcgagtgggcaccacaacactagaacaa
caacaacaacaacaacaaggagggcgacataaagctggcgtgcacccggggacccactgt
aaaggcatcagctcggagaaacccgtccgagcatccccaccgagctctccgccaccgctg
gacgaggcttctgtcactgttgtcgccgaccagaaagcaaacgccagcagcggctcgcct
ccccgtgatacatcaatcacaacatcgaacgcctccgctctgtcaactttggcaccgtct
cgaatcagcatcagcaccgcggctccgggtcccatggtaaccgctttatctccgagtggt
ggcacgagacccactaatcctccgaggaaacgcgccaccgtcgcgtcaaagaggagcgcg
tccgctcggatcaagagtttaaccggaggagcggtgtcaacgcggcggactagcgctggt
gcctcggcgtccgacctcgctagccctgcagccgggtgtacaagtgcagcaaaccctatt
ctgagagcagggacagcatcatgtagtagaacccccgcgactgttaccttgtctaacgcc
agcagcgtgccagcagcaggtcagtcgtgtggtgctctcgatcggggcacgcctaccata
gcgctgcacagacttcccaatcatatcgtggcaagcatagcccagaatggcaacggcacc
acggtgtctgctcttgtccagcaaggggcgcgtttaggacccatcacctcccccggtgta
cagctcaaccacaacgcagcgttgacgcttaacacttcggtttccaaaacagacgagtct
caccataaaaccgccatggcgagtcaatcatgcaacacgagttctgtaataagcacctgt
tcttcttctgttgtgttaacaacagcagccacgttaagttccctcaccaccgcggctggc
tgtgccgccggcgtggcgacgactctgagtgggagcgggcaaacgacagcaccaaacatg
cacacgaacacggtcagactggcagctccctcggctgcacccgttggtgccacccctgct
gcacagtgtcagccccgtcccgggctgactgcacctcctcaaaggattgtagctccacaa
cagttgattgtcagggcgcctcaaccgcagacgaccatccagctgccctctggctttacc
attcctcaggggatggtcttggtgcggacggagctgggacaacttgtgatggtccctcag
caagcgctagcacaagcccaggctcagaacaacctctccccgcgaccctccacgcctaca
accgggccctccttcagagcccccggccctcagaagggccccgtggcccccgccgtggca
gtgacggctccccagcaggcccccgcatcgggggccccccaggcccgggccgcggccccg
gcctcgcgaccggctcagcccccgcagacggccgtcgccgtggcccccgggggcccggcc
gtagcccaggaaatgcaggacaacgtgaagaagtgtaagaacttcctggccacgttgatc
aagctggcgtcccacaattctccttcccccgagacatccaagaatgtcaagagcctggtc
caggatctgttggacgccaagatcgagcccgaggagttcaccagccggctgcaggcggag
ctcaagtcgtcgccccagccctacctcgtgcccttcctcaagaagagtctcccggccctg
cggttgtctctgctcagcagtcagcattcggtgcccaccccccagcagggagtgaagccg
ggggtctaccccggccccccggtggcggggggggcagcggtccgggtccactaccccaac
agcgtcggaccggccacgggggcgggcggactggcggccgcacacacagccggcgtgggg
atgaagagagggggcgtgtctgggggacaggttcggacgcccgtggcgacaccgtgtatg
agagcacaaggtgctctgtgtaagggactggtcggtgcccagacaggcagaggccccgcg
ggtatgggtccaccgggctccgggaaccagaaaaacaagcccaacgatcccgggggtggt
tcgttcagggacgacgacgacatcaacgacgtggcttccatggccggggtgaacctgaac
gaggagagcgccaggatcctggccaccaactcggagctggtggggacccacatccgctcg
tgcaaagacgaggccttcctccacccggggctgctgcaccggaggattctggaagcagcg
aagaggtttggcgtgacggaggtgcccatggactcggtgacgttcatctcccacgccgcc
caggcacggctccgcaccgtcctggagacggtgtcctccatcgctcagcaccgcctcgac
tcctgcaaggatgaggagtggtacgagccgtctgcagacgtgcgctcccagctcaggttc
tttgagcagctggagaggatggagaagcagaggaaggacgagcaggagagagagatcctg
ctgaaggctgctaagagccgggcgaggctggaggacccagagcaggcccggctgaagcag
aaggcgaaggagatgcagcaacacgaactggcccagacgaggcagagagaggctaacctc
accgctctggccgccatcggcccccgaaagaaacgcaagatggattcggcgtgggccacg
gcgtcggggagcgaggtgagaggaccctccacgtccgggcggcggaagagctttcttatg
cgctga
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integrated database retrieval system
