Gadus morhua (Atlantic cod): 115559081
Help
Entry
115559081 CDS
T10832
Name
(RefSeq) neuronal-specific septin-3-like isoform X1
KO
K16938
septin 3/9/12
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
115559081
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gmh03037
]
115559081
04812 Cytoskeleton proteins [BR:
gmh04812
]
115559081
04147 Exosome [BR:
gmh04147
]
115559081
Cilium and associated proteins [BR:
gmh03037
]
Motile cilia and associated proteins
Sperm associated proteins
115559081
Cytoskeleton proteins [BR:
gmh04812
]
Eukaryotic cytoskeleton proteins
Septins
Septins
Group 1
115559081
Exosome [BR:
gmh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115559081
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Septin
RsgA_GTPase
MMR_HSR1
AIG1
GTP_EFTU
Dynamin_N
Roc
AAA_16
Ras
ABC_tran
AAA_22
NB-ARC
URGCP_GTPase
FtsK_SpoIIIE
AAA_29
IIGP
G-alpha
P-loop_TraG
TniB
Sigma54_activat
RNA_helicase
AAA_7
Motif
Other DBs
NCBI-GeneID:
115559081
NCBI-ProteinID:
XP_030233605
Ensembl:
ENSGMOG00000016164
LinkDB
All DBs
Position
2:complement(13693232..13778415)
Genome browser
AA seq
642 aa
AA seq
DB search
MKKAGYSGIARSTSGRLRRGSDKDGSTITSPTLKRSFEVEEADSSTHPSPLTRRTTNPLR
SSNSSTSSQRSYDLGSRNSDYSSSRTSPSEPSNSRSPKTGIRRIDLSGGRNPDAAPSRRT
EISIEVSSKQIDSSPSAGIARFGLKRPEVGLNSRSNHPESGSSGPLPSSLQRRAEMSLTR
PQEPPAPPRRTDSQPSAAACSTRIPEPPQQKRPEPATPSPTEVSSRRPEAPVFRQQDLLL
LENNSNDNQGGSHPPPVPSSPPPAAAEPRGERVQFPVSPTHASRPTERSEAISYRSTMSE
LAVAPEVMMPPVSGGIYSEKIAVGGGPVLDFSYVGIDAILEQMRKKAMKQGFELNIMVVG
QSGLGKSTLMNTLFKSKVSRKSALEKEKEKIPKTVEIKSISHDVEEKGVRMKLTVIDTPG
FGDQINNENCWQPIMKFINDQYEAYLQEEININRKKRIPDSRVHCCIYFIPPTGHCLRPL
DVEFMRRLSKVVNIVPVIAKADTLTLEERDFFKQKIREELRANGIDVYPQKEFDEDAEDR
MINEKIREMIPFAVVGSDQEYQVNGRRLLGRKTKWGTIEVENIAHCEFAYLRDLLIRTHM
QNIKDITSSIHYELYRVRRLHENNTVAAANGLPEHRLVAHEM
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagctggatattcaggtatagccaggtctaccagcggtcgcctcaggagaggg
tcagacaaagatggatctaccatcaccagccctacgctaaagcggtcgtttgaggtggag
gaggcagactcatccactcacccttcgcccctgacccgccgcaccaccaaccccctccgc
tcgtccaactcctccacgtccagccagcggagctacgacctcggctcccgcaactcagac
tactcttcttccagaacttccccttccgagccctccaattcccgctccccaaagacgggc
attaggcgcatcgacctatcgggaggccggaaccccgatgcggcccccagccgacgcacg
gagatctccatcgaggtctcctccaagcagatcgacagctcccccagtgccggaatcgcc
cgcttcggcctcaagcgccctgaggtaggcctgaacagtcggagtaaccacccagagagc
ggctcctccgggcccctccccagctccctccaaaggcgggcagagatgagtttgacacgc
ccccaagagccccccgcgcccccaaggaggacggactcccagccctccgcggcggcctgc
agcacccggatccccgagcccccccagcagaagaggccggagcctgccacgcccagcccc
acggaggtgagctccaggaggccagaggcgcccgtgttcagacagcaggatctgctgctg
ctggagaacaacagcaacgacaaccagggcggcagccatccacccccagtgccgagcagc
cctccgcccgccgcggcagagccccggggggagagggtgcagttccccgtctccccgacc
cacgcctccagacctacagagaggtcagaggcgatcagctaccgcagtaccatgtcggag
ctggcagtggcgccagaggtgatgatgccccctgtgtcaggggggatttacagtgagaaa
atagccgtcggcggaggtccagtgttggacttcagctatgtgggcatcgacgccatcctg
gagcagatgaggaagaaggcaatgaagcagggcttcgaactcaacatcatggtcgtggga
cagagtggactgggcaaatccaccctgatgaatacgctcttcaagtccaaagtgagccgt
aagtctgctctggaaaaggaaaaggaaaagatcccaaagacggtggagatcaagtccatc
agccacgatgtggaggagaagggtgtgaggatgaagctgacggtcattgacacaccgggc
ttcggagaccagatcaacaacgagaactgttggcagcccatcatgaagttcatcaacgac
cagtatgaggcctacctgcaggaggagatcaacatcaacaggaagaaaaggatcccagac
tccagggtccactgctgcatatacttcatcccccccaccggccactgcctgcgcccgctg
gatgttgagttcatgcggcgtctgagcaaggtggtgaacatcgtcccggtcatcgctaag
gccgacacactcaccctggaggagagggacttcttcaagcagaagataagggaagagctg
cgtgccaacggaattgatgtgtatccacaaaaggagtttgacgaagatgcagaagacagg
atgatcaatgagaagatcagggaaatgattccatttgctgtggtgggcagtgaccaggag
taccaggtgaatggccgcaggctgctgggacgcaagaccaagtggggaaccattgaagtc
gagaacatagcccactgtgagttcgcctatcttcgagatcttctaataagaacccacatg
cagaacatcaaggacatcaccagcagcatccactatgagctgtaccgggtgcggcgcctt
cacgagaacaacactgtagccgccgctaacggcctcccagagcaccgcctggttgcccat
gagatgtag
DBGET
integrated database retrieval system
