Gadus morhua (Atlantic cod): 115559095
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Entry
115559095 CDS
T10832
Name
(RefSeq) aggrecan core protein-like isoform X1
KO
K06792
aggrecan 1
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
gmh00535
]
115559095
00536 Glycosaminoglycan binding proteins [BR:
gmh00536
]
115559095
04091 Lectins [BR:
gmh04091
]
115559095
Proteoglycans [BR:
gmh00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
115559095
Glycosaminoglycan binding proteins [BR:
gmh00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
115559095
Lectins [BR:
gmh04091
]
C-Type lectins
Lecticans
115559095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
Sushi
V-set
EGF
hEGF
I-set
Motif
Other DBs
NCBI-GeneID:
115559095
NCBI-ProteinID:
XP_030233622
Ensembl:
ENSGMOG00000025583
UniProt:
A0A8C5BI85
LinkDB
All DBs
Position
14:complement(21116186..21127550)
Genome browser
AA seq
1585 aa
AA seq
DB search
MWKRIAILSVCLNIISASFDYMYDDVSFLDPEEVLSVSIPLEGPQRSLLGGSLILPCYFQ
DLTVNDPGAPTVTPLSHRIKWSRVTKEKTTTVLVAMEGRVRVDINYLDRVQMVGYPSTPS
DASIKMSELRSNDTGIYRCEVQQGIEDHHDTVHVQVQGIVFHYRAITTRYSLTFEKAKAA
CIQNSAVIATPEQLQAAYDDGFHQCDAGWLSDQTVRYPIHDPREKCYGDKDDLPGVRTYG
VREVNETYDVYCFAEKMTGRVFYSGSPAKFTHAQAVDQCSQQGAQLATTGQLYLAWQGGM
DACNAGWLADMSVRYPINVRRPQCGGGLLGVRTVYLHANQTGYPLLETRYDAICYTESPD
DESSGMDSFTEVDSSILSVATVNMTPLVLFGATKGSEAVGEVVTQQPPTFDYTQSPTESS
LTQPPDIEEVIDEVIEKVTTRIHINREPGKGFVMPSTGLVFHYRSGAGRYAFSFVEAQLA
CQSIGASIATADQLQAEYRAGYHQCDAGWLLDQTVRYPIVSPRDKCAGDLMEQPGVRSYG
LRPADERYDVYCYVDGLKGEVFHVSSAEGFTYDEALSRCQEENATLASTGELYATWKMGF
DKCRAGWLLDRSVRYPINNPRAQCGAGKSGVHTVYTHSNQTGYPDPYAKYDAYCFKVDIL
LIANETGLNITEIQEALLNLTSINDLLRIASPSIALPIPVEPSGSGSGSADYGSGLGVSI
ASGDHSGDLSASGSGTGPGSGDTSGSGDDSGSGVMPGSGDPSGSGEQSGSGAMHGSGDPT
GSGDPSGSEVLSGPGDMSGSWVLSGSGDLSGSGVLSGSGELSGSGAMPGSGELSSSGDMS
GSGDLSGSGDLSGPKVLSGSGDHITSGDMSGSGDLSGSGVLSGSKVLSGSGDHITSGDMS
GSGQQSGSGSAELPSGGSGLSGDNLSGSEGSGLASVIKVIFSGSGSFLSGEGSASGGPQE
AGKGSTEIITYLPDSSSGMFSGSREQAGSGCSSGESGSPSSDISGSGTSCGTLSDPGSTQ
ELSGFSGFPSAFSASGSASGSSGEESGNREVRILLVDGELVDVSTSVDKEFELGGGLLEF
SGSGGISGSGMPSGLSSSGSGEGSGFFSGVTFVGSGLTDLTESSSGEGEASGVLLYGSGQ
ESSGDLSGFGPSGSGSGSGIGSGISGYGISGYGISGSGISGSGISGSESSTSEEEGSVTF
LDGNEMTEQSTSATQSLELGLGSAEYSGDGSTGRSFFSGSGNSRSGNAISPTTSDGSSGD
TSGKPLVIPTTSADRELTESTAEAEVGNTLKVETAEDWYGSIRPDIAPAALAVNVTQPPA
TTLQAPSVTEGVNEVDVCHSNPCANGATCVESADSYKCFCLPSYGGDRCEIDEQKCEEGW
TKFQGNCYLHFFARETWLDAEQHCRDIDSHLVSIITPEEQDFVNSNAQDYQWIGLNDKTV
ENDFRWTDGTPLQYVNWRPNQPDNYFNSGEDCVVMIWHEQGQWNDVPCNYHLPFTCKKGP
VLCGSPPEVENASKYGDKKEYYPVKSIVRYQCNAGYRQRHTPVVHCKPDGQWEKPQVQCT
AVKGKPTLQRRTTRTREESSINELL
NT seq
4758 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagaggattgcaatactatcagtatgtctaaacatcatttcagcatcatttgat
tacatgtacgatgacgtctcttttctggaccctgaagaagtactaagtgttagcattcct
ctggagggtccccagcgctctttattgggaggatccttgattctaccatgctacttccag
gatctcaccgtcaacgacccaggagctcctaccgttacacctctctcccatcgcatcaaa
tggagccgtgtgaccaaggagaaaaccaccacggtactcgtagcgatggagggaagagtg
cgcgtcgacatcaactacctggacagggttcagatggtgggctacccctcaacgcccagc
gacgctagcatcaagatgtccgagctgcgctccaacgacacggggatctaccgctgcgag
gttcagcaaggcatcgaggaccaccatgacactgtacacgttcaggtccaaggaatcgtt
ttccactatcgtgccataactactcgctacagtttaacctttgaaaaagccaaggctgcc
tgcatccagaatagtgcagtcattgctaccccagaacagctacaggcagcttatgatgat
ggattccaccaatgtgatgctggctggctctctgatcaaactgtcaggtaccccattcat
gatccgcgagagaaatgctatggtgataaagatgacctccctggggtcaggacctatgga
gtgagagaagtcaacgagacttatgacgtctactgtttcgctgagaagatgacaggcaga
gttttctacagcggttctccggctaagttcacccatgcccaggctgtggatcagtgctct
cagcagggggctcagctggccactacggggcagctttacctggcttggcagggaggcatg
gatgcctgtaacgccggctggctggccgacatgagcgtccgttaccccatcaatgtccgg
aggccgcaatgcggagggggtctgctgggggtacgcactgtctacctgcatgccaaccaa
acagggtacccccttctggagacccgctacgacgccatctgctacacagagtccccagac
gacgagagctcaggcatggattcctttacagaagtggacagcagcattctgagtgttgcc
acggtaaacatgacccccctggttctgtttggcgccacaaagggaagcgaagcggtcggt
gaggtggtgactcagcagccgcccacctttgactacacgcagagcccgaccgagtcgtct
ctgactcagccgcccgacatcgaagaggtcatcgacgaggttatagagaaggtcacaacc
aggattcacatcaacagggagccgggcaaaggctttgtgatgccgtcgaccggcctggtg
ttccattaccgttcaggcgctggtcgctatgcgttttcattcgtggaggcacagctggcg
tgccagagtatcggggcatccattgccaccgcagatcaacttcaggccgaatacagggct
ggatatcaccagtgtgacgcaggctggttactggatcagacagtcaggtaccccattgtg
tctcctcgtgataagtgcgcaggagacctgatggagcagcccggggtcaggtcctacggc
ttgagacccgcagacgagcgctatgatgtgtattgctacgttgatgggctcaaaggtgag
gtgttccacgtcagttccgctgaaggtttcacatatgatgaggcgctctctcgctgtcag
gaggagaatgccaccctggcctccacaggagagctgtacgccacatggaaaatgggcttt
gataagtgtcgtgcgggctggcttcttgaccgcagtgttcgttaccccatcaacaacccc
cgggcgcaatgtggggcagggaagtcaggagtgcacacagtttatactcactccaaccag
actggataccctgacccttacgccaaatatgatgcctattgtttcaaagtggatattttg
ctcatcgcaaatgaaactggattgaacatcacagagatccaagaagctttgttaaacctt
acatcaatcaatgatttgctcaggattgcatctccttccattgccctgcccatccctgtg
gagccttcaggttctggatcaggctcagcggattatgggtctggtctgggtgtcagcatt
gcctctggtgatcactctggagacctatcagcatctggatctgggacagggcccggctct
ggtgacacatctggttccggggatgattcaggatctggtgttatgcctgggtctggtgac
ccgtctggttccggggaacagtcaggatctggtgctatgcacgggtctggtgacccaact
ggatcaggagacccgtctggttccgaggtcctatctggtccgggagacatgtctggttct
tgggtcctatctggttccggggacttgtctggttctggggtcctatctggttctggagaa
ctgtctggatccggtgccatgcctggttctggtgaattatcaagttctggagacatgtct
ggttctggagacctgtctggttctggagacctatctggtcctaaggtcttatctggatcc
ggagaccacattacttcaggagacatgtctggttctggagacctgtctggttctggagtc
ctatctggttctaaggtcttatctggatccggagaccacattacttcaggagacatgtct
ggatctggacagcagtctggcagtggaagcgctgaacttcctagtggaggatctggattg
agcggcgacaacctttctggatccgagggcagtggattggcatcagtcatcaaagtaatt
ttctcaggtagtggtagttttctgtctggagaaggctctgcttcaggaggacctcaagag
gcaggaaagggaagcacagagatcatcacgtaccttcctgacagcagctctgggatgttt
agtggcagtagggagcaggcaggatccgggtgtagctctggtgagagtggctctccctcc
tcagacatatctggaagtggaacatcttgcggcacgttgtctgatcctggctcaacccaa
gagctttctgggttcagcgggttcccatcagcattctcagcctcaggaagtgccagcgga
tcatcaggagaggaatcaggcaatagagaggttcgcatcctactggtagatggtgaactg
gttgacgtttccacctcagtcgataaggagtttgagctggggggaggtctgcttgagttc
agtggttctggaggcatttcaggatcaggcatgccaagtggtctgagtagttcaggctct
ggagagggctccgggttcttctcgggtgtgacctttgttggatcagggttaactgacctc
acagagtcatcctctggagaaggggaggcttctggggttttattatatggttctggacaa
gagagtagtggagacctgtctggatttggaccctctggttccgggtcaggctcagggatt
ggctctggaatctctggatatggtatctctggatatggtatctctggatctggaatctct
ggatctggaatctctggatctgagtcgtctactagcgaagaagagggcagtgtaacattc
ttagatggaaatgagatgacagagcagtccacttcagccactcaatcccttgagctcgga
ctagggtcagcggagtatagtggagacggaagcaccggcagaagcttcttctccggtagt
gggaatagtaggagtgggaacgccatctcacccacaaccagtgatggctcatcgggggat
acctctggaaaacccctggttatacccactacatctgctgacagggagctcacagaaagc
acagcagaggcagaagtggggaacacgctcaaggtagagactgcagaagattggtatggg
agcattagacctgacattgcaccagccgcactggctgtcaatgtcacccaacccccggcc
accacccttcaggcaccgagcgtcactgaaggagtaaatgaagtagatgtgtgccattcc
aacccctgtgccaacggagccacctgtgtggaaagtgccgactcttacaaatgcttttgc
ctgcccagttatggaggggatcgctgtgagattgatgaacaaaagtgcgaagagggctgg
actaaattccagggcaactgctacctgcacttctttgcaagagagacgtggttggatgca
gagcagcactgcagggacattgattctcatctggtcagcattatcacccccgaggagcaa
gactttgtcaactcaaatgcacaggactaccagtggattgggctgaatgataaaacagtg
gagaacgacttccgctggacggatggcaccccactgcaatacgtgaactggaggcccaac
cagccagataactacttcaactcgggggaggactgtgtggtgatgatctggcacgagcag
ggccagtggaacgacgtgccctgcaactaccacctgccgttcacctgcaagaaaggccca
gtcttatgtggctcaccgccagaggtggagaacgccagcaagtatggggataagaaggag
tactacccggtcaaatccatcgtccgctaccagtgcaacgcaggctacagacagcgacat
accccagtggtacattgcaagccggatggacagtgggagaaaccgcaggttcaatgtact
gccgtgaagggaaagccgacactacagcggagaaccaccaggaccagagaagaatcatcc
atcaacgagcttctctaa
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integrated database retrieval system
