Gadus morhua (Atlantic cod): 115559126
Help
Entry
115559126 CDS
T10832
Name
(RefSeq) integrin beta-7-like isoform X1
KO
K06590
integrin beta 7
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04510
Focal adhesion
gmh04512
ECM-receptor interaction
gmh04514
Cell adhesion molecule (CAM) interaction
gmh04518
Integrin signaling
gmh04672
Intestinal immune network for IgA production
gmh04810
Regulation of actin cytoskeleton
gmh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115559126
04514 Cell adhesion molecule (CAM) interaction
115559126
04518 Integrin signaling
115559126
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115559126
09142 Cell motility
04820 Cytoskeleton in muscle cells
115559126
04810 Regulation of actin cytoskeleton
115559126
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
115559126
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gmh04147
]
115559126
04515 Cell adhesion molecules [BR:
gmh04515
]
115559126
Exosome [BR:
gmh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115559126
Cell adhesion molecules [BR:
gmh04515
]
Integrins
Integrin beta subunits
115559126
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
PSI_integrin
EGF_2
EGF_Teneurin
EGF_TEN
I-EGF_1
EGF_integrin
Integrin_b_cyt
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
115559126
NCBI-ProteinID:
XP_030233671
Ensembl:
ENSGMOG00000013672
LinkDB
All DBs
Position
14:8672959..8691170
Genome browser
AA seq
847 aa
AA seq
DB search
MAEAEDRWTPAPDLYPQLSGDGRCPLDGSRIGLMGRQRSWPQQRAEASAPVQVEILTGLP
STRLRRWNLSRRVFRHLPCRSQVPWRMFVRGPAASQMVLLSILLPLLHSLGGVLGAKTCV
PRPSCSECIQSPGCAWCSAKGFLQAGEPSERRCDAKEALTSRGCKEPYLPETEEALLMKD
KELSASDDIIQLRPQQIHFQLRVGVPQTFKVSFKRAEGYPIDLYYLMDLSFSMGDDLDMI
KKLGQDLVSTLQSFTKKLRIGFGSFVDKVALPYVSQMKRKRRDPSPHRETSCQPAFSFQN
LLNLTTDIAAFEKKVIGQRISANLDSPESGFDAIMQAAVCKDVIGWDKGTKILLYTSDDT
FHMAGDGRLAGLSEPPDGHCHLSPSGLYDGTRFDYPSIGQLARVLTANNIQLIFAVTKNI
SAAYEELSKMIPQSVVGVLESDSSNVVQIIKNAYNSLSSSVVLEHHGAPQGLEVAYQAYC
TSPSPGLPGLRPWSQRAECKDIKINQQVDFYVQLNMSRCLEQTEFHLSVQGISEQLKLVV
KMKCECDCGPVEEASPSCSGHGTLHCGTCRCDPGFLGQTCDCQQSEDHVSLYEKCRHGGS
SQLCSGHGSCECGKCACQHSFSGPFCECDDSNCAQSNQQLCGGNGKCVCGKCNCLAAYGG
EACDCSTLTDRCQTAGRPCSGRGDCLCNRCVCKGGFDGDHCSHIPNNCTKYEKCVTCISN
LAGEGAEACEVPCEGAVLSSKDGRTLQDAHCSFQSFLYDVTLTPQGIVHLRYAEMPRTID
KTWVIIWSTMSGIVFIGLLIILISRLLLEFHYRREYQSSVTDQQQTDWKETHIPLLKDTT
TTTVIFR
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggctgaggacaggtggacacctgccccggatctctaccctcagctcagcggc
gatggaagatgtccactggatgggagcaggattggtttgatgggaaggcagcggtcttgg
ccacagcagagggccgaagcatccgcaccggtacaggtggagattcttacaggtttacct
tcgaccaggttacggcgatggaacctgtcgcggagagtctttcgacacttgccgtgcagg
tctcaggttccctggaggatgttcgtccgtgggcccgcagccagtcagatggttctgctg
tcaatccttctgcctcttctgcactcgctgggtggagttttgggagccaagacttgtgtc
cccaggccgagctgcagcgagtgcatccagagcccgggctgtgcctggtgctcagcgaag
ggcttcctgcaggccggggagcccagcgagaggcgctgcgatgccaaagaggcgctcacc
agcagaggctgtaaagagccctacctccctgagacagaggaggcactccttatgaaggac
aaagagctgagtgcttctgacgacattatccagctccgaccccaacagatacactttcag
ctcagagtgggagttccacaaaccttcaaggtgtcgttcaagcgggccgagggttacccc
atcgacctctactacctcatggacctgtccttctccatgggggacgacctggacatgatc
aagaaactgggtcaggacttggtcagcactctgcagagcttcaccaagaaactgcggata
ggatttgggtcctttgtggacaaggtggcgttgccgtacgtgagtcagatgaagaggaag
aggagggatcccagtccgcaccgagaaaccagctgccagccagccttcagcttccagaac
ctcctcaacctcacaacagacattgcggccttcgagaaaaaggtcatcgggcagaggatt
tctgccaacctggactcacccgagtcaggctttgacgccatcatgcaagctgcggtctgt
aaggacgtgattggctgggacaaagggaccaagatcctactctacacgtctgatgacacg
ttccacatggcgggggacgggcgtctggccggcctcagcgagcctccagacggccactgc
cacctctctccgagcggcctctacgatgggacacgattcgattacccctccatcggacag
ctggcccgggtcctcaccgccaacaacatccagctcatattcgccgtcaccaaaaacatt
tctgcagcttatgaggaactgagtaaaatgatcccacagtctgtggtcggagttctggag
agcgattccagcaatgtggtccagatcatcaaaaatgcttacaatagcctgtcctccagc
gtggtcctggagcaccacggcgccccccaggggctggaggtggcctaccaggcctactgc
acgagcccgagcccgggcctgcccgggctccggccctggagccaaagagcagagtgcaag
gacatcaagatcaaccagcaggtggatttctacgtccagctgaacatgtccaggtgtctg
gagcagacagagttccacctctccgttcagggcatcagtgagcagctgaagctcgtggta
aagatgaagtgcgagtgcgactgcggcccggtagaggaggcgtctccctcctgcagcggt
cacggcacgctgcactgcggcacatgcagatgcgacccgggcttcctgggccagacgtgt
gactgccagcagagtgaggaccatgtctctctctacgagaagtgccgtcatggcgggtcc
tctcagctgtgcagtggccacggcagctgcgagtgtggcaagtgtgcgtgccagcacagc
ttcagcgggccattctgcgagtgtgacgacagcaactgcgcacaaagcaaccagcagttg
tgtggcggaaacgggaagtgtgtttgtgggaagtgcaactgcttggccgcttacggaggg
gaggcctgcgactgctccacgctcaccgaccggtgccagacggcaggcagaccctgtagc
ggccgaggggactgtctctgcaacagatgcgtctgcaagggagggtttgacggcgaccac
tgctcccacattcccaacaactgcaccaaatacgagaagtgtgtgacgtgcatttccaat
cttgcgggagagggcgctgaggcctgcgaggtcccctgtgagggggcggtgttgagcagt
aaggatggacggacgcttcaggacgcccactgcagcttccagtccttcctgtacgacgtg
acgctgactccccagggcatcgtccacctccgctacgccgaaatgcccagaactattgat
aagacttgggtgatcatctggagcaccatgtcaggaatcgtcttcatcggcctgttgatc
atcctcatcagccgtctgcttctcgagttccactaccgccgggagtaccaaagctccgtc
acagaccagcagcagaccgactggaaggagactcacattcccttgctcaaagataccacc
accaccacggtcatatttagatga
DBGET
integrated database retrieval system