KEGG   Gadus morhua (Atlantic cod): 115559126
Entry
115559126         CDS       T10832                                 
Name
(RefSeq) integrin beta-7-like isoform X1
  KO
K06590  integrin beta 7
Organism
gmh  Gadus morhua (Atlantic cod)
Pathway
gmh04510  Focal adhesion
gmh04512  ECM-receptor interaction
gmh04514  Cell adhesion molecule (CAM) interaction
gmh04518  Integrin signaling
gmh04672  Intestinal immune network for IgA production
gmh04810  Regulation of actin cytoskeleton
gmh04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    115559126
   04514 Cell adhesion molecule (CAM) interaction
    115559126
   04518 Integrin signaling
    115559126
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    115559126
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    115559126
   04810 Regulation of actin cytoskeleton
    115559126
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    115559126
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gmh04147]
    115559126
   04515 Cell adhesion molecules [BR:gmh04515]
    115559126
Exosome [BR:gmh04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   115559126
Cell adhesion molecules [BR:gmh04515]
 Integrins
  Integrin beta subunits
   115559126
SSDB
Motif
Pfam: Integrin_beta PSI_integrin EGF_2 EGF_Teneurin EGF_TEN I-EGF_1 EGF_integrin Integrin_b_cyt vWA_SIBA-E
Other DBs
NCBI-GeneID: 115559126
NCBI-ProteinID: XP_030233671
Ensembl: ENSGMOG00000013672
LinkDB
Position
14:8672959..8691170
AA seq 847 aa
MAEAEDRWTPAPDLYPQLSGDGRCPLDGSRIGLMGRQRSWPQQRAEASAPVQVEILTGLP
STRLRRWNLSRRVFRHLPCRSQVPWRMFVRGPAASQMVLLSILLPLLHSLGGVLGAKTCV
PRPSCSECIQSPGCAWCSAKGFLQAGEPSERRCDAKEALTSRGCKEPYLPETEEALLMKD
KELSASDDIIQLRPQQIHFQLRVGVPQTFKVSFKRAEGYPIDLYYLMDLSFSMGDDLDMI
KKLGQDLVSTLQSFTKKLRIGFGSFVDKVALPYVSQMKRKRRDPSPHRETSCQPAFSFQN
LLNLTTDIAAFEKKVIGQRISANLDSPESGFDAIMQAAVCKDVIGWDKGTKILLYTSDDT
FHMAGDGRLAGLSEPPDGHCHLSPSGLYDGTRFDYPSIGQLARVLTANNIQLIFAVTKNI
SAAYEELSKMIPQSVVGVLESDSSNVVQIIKNAYNSLSSSVVLEHHGAPQGLEVAYQAYC
TSPSPGLPGLRPWSQRAECKDIKINQQVDFYVQLNMSRCLEQTEFHLSVQGISEQLKLVV
KMKCECDCGPVEEASPSCSGHGTLHCGTCRCDPGFLGQTCDCQQSEDHVSLYEKCRHGGS
SQLCSGHGSCECGKCACQHSFSGPFCECDDSNCAQSNQQLCGGNGKCVCGKCNCLAAYGG
EACDCSTLTDRCQTAGRPCSGRGDCLCNRCVCKGGFDGDHCSHIPNNCTKYEKCVTCISN
LAGEGAEACEVPCEGAVLSSKDGRTLQDAHCSFQSFLYDVTLTPQGIVHLRYAEMPRTID
KTWVIIWSTMSGIVFIGLLIILISRLLLEFHYRREYQSSVTDQQQTDWKETHIPLLKDTT
TTTVIFR
NT seq 2544 nt   +upstreamnt  +downstreamnt
atggctgaggctgaggacaggtggacacctgccccggatctctaccctcagctcagcggc
gatggaagatgtccactggatgggagcaggattggtttgatgggaaggcagcggtcttgg
ccacagcagagggccgaagcatccgcaccggtacaggtggagattcttacaggtttacct
tcgaccaggttacggcgatggaacctgtcgcggagagtctttcgacacttgccgtgcagg
tctcaggttccctggaggatgttcgtccgtgggcccgcagccagtcagatggttctgctg
tcaatccttctgcctcttctgcactcgctgggtggagttttgggagccaagacttgtgtc
cccaggccgagctgcagcgagtgcatccagagcccgggctgtgcctggtgctcagcgaag
ggcttcctgcaggccggggagcccagcgagaggcgctgcgatgccaaagaggcgctcacc
agcagaggctgtaaagagccctacctccctgagacagaggaggcactccttatgaaggac
aaagagctgagtgcttctgacgacattatccagctccgaccccaacagatacactttcag
ctcagagtgggagttccacaaaccttcaaggtgtcgttcaagcgggccgagggttacccc
atcgacctctactacctcatggacctgtccttctccatgggggacgacctggacatgatc
aagaaactgggtcaggacttggtcagcactctgcagagcttcaccaagaaactgcggata
ggatttgggtcctttgtggacaaggtggcgttgccgtacgtgagtcagatgaagaggaag
aggagggatcccagtccgcaccgagaaaccagctgccagccagccttcagcttccagaac
ctcctcaacctcacaacagacattgcggccttcgagaaaaaggtcatcgggcagaggatt
tctgccaacctggactcacccgagtcaggctttgacgccatcatgcaagctgcggtctgt
aaggacgtgattggctgggacaaagggaccaagatcctactctacacgtctgatgacacg
ttccacatggcgggggacgggcgtctggccggcctcagcgagcctccagacggccactgc
cacctctctccgagcggcctctacgatgggacacgattcgattacccctccatcggacag
ctggcccgggtcctcaccgccaacaacatccagctcatattcgccgtcaccaaaaacatt
tctgcagcttatgaggaactgagtaaaatgatcccacagtctgtggtcggagttctggag
agcgattccagcaatgtggtccagatcatcaaaaatgcttacaatagcctgtcctccagc
gtggtcctggagcaccacggcgccccccaggggctggaggtggcctaccaggcctactgc
acgagcccgagcccgggcctgcccgggctccggccctggagccaaagagcagagtgcaag
gacatcaagatcaaccagcaggtggatttctacgtccagctgaacatgtccaggtgtctg
gagcagacagagttccacctctccgttcagggcatcagtgagcagctgaagctcgtggta
aagatgaagtgcgagtgcgactgcggcccggtagaggaggcgtctccctcctgcagcggt
cacggcacgctgcactgcggcacatgcagatgcgacccgggcttcctgggccagacgtgt
gactgccagcagagtgaggaccatgtctctctctacgagaagtgccgtcatggcgggtcc
tctcagctgtgcagtggccacggcagctgcgagtgtggcaagtgtgcgtgccagcacagc
ttcagcgggccattctgcgagtgtgacgacagcaactgcgcacaaagcaaccagcagttg
tgtggcggaaacgggaagtgtgtttgtgggaagtgcaactgcttggccgcttacggaggg
gaggcctgcgactgctccacgctcaccgaccggtgccagacggcaggcagaccctgtagc
ggccgaggggactgtctctgcaacagatgcgtctgcaagggagggtttgacggcgaccac
tgctcccacattcccaacaactgcaccaaatacgagaagtgtgtgacgtgcatttccaat
cttgcgggagagggcgctgaggcctgcgaggtcccctgtgagggggcggtgttgagcagt
aaggatggacggacgcttcaggacgcccactgcagcttccagtccttcctgtacgacgtg
acgctgactccccagggcatcgtccacctccgctacgccgaaatgcccagaactattgat
aagacttgggtgatcatctggagcaccatgtcaggaatcgtcttcatcggcctgttgatc
atcctcatcagccgtctgcttctcgagttccactaccgccgggagtaccaaagctccgtc
acagaccagcagcagaccgactggaaggagactcacattcccttgctcaaagataccacc
accaccacggtcatatttagatga

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