Gadus morhua (Atlantic cod): 115559438
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Entry
115559438 CDS
T10832
Name
(RefSeq) sodium/calcium exchanger 1-like
KO
K05849
solute carrier family 8 (sodium/calcium exchanger)
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04020
Calcium signaling pathway
gmh04260
Cardiac muscle contraction
gmh04261
Adrenergic signaling in cardiomyocytes
gmh04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
115559438
04020 Calcium signaling pathway
115559438
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
115559438
04261 Adrenergic signaling in cardiomyocytes
115559438
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gmh02000
]
115559438
00536 Glycosaminoglycan binding proteins [BR:
gmh00536
]
115559438
Transporters [BR:
gmh02000
]
Solute carrier family (SLC)
SLC8: Na+/Ca2+ exchanger
115559438
Glycosaminoglycan binding proteins [BR:
gmh00536
]
Heparan sulfate / Heparin
Others
115559438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calx-beta
Na_Ca_ex_C
Na_Ca_ex
Motif
Other DBs
NCBI-GeneID:
115559438
NCBI-ProteinID:
XP_030234047
Ensembl:
ENSGMOG00000018575
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All DBs
Position
15:complement(9368048..9385047)
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AA seq
931 aa
AA seq
DB search
MARWTPSISPSLAVVMVTLLLLLQTSWAAGLDHAPDGSVSMVPTSRNCSEAEPCSRGVLL
PVWEPRNPSSGDKVARATVYFVALVYMFLGVSIVADRFMASIEVITSQEKEITIKKPNGE
TMTTTVRIWNETVSNLTLMALGSSAPEILLSVIEVIGHGFTAGAMGPATIVGSAAFNMFV
IIGICVYVVPDGETRKVKHLRVFFVTASWSIFAYIWLYLILAVISPGVVQVWEALLTLFF
FPICVLFAWIADRRLLFYKYMYKHYRAGKHRGMIIETEGDRPLPSKVDIEMDGKMLNSHG
VDFLDGPLGLELDEKDLDDEETRRDMAKILKELKQKHPDREVEQLIELANYQVLSQQQKS
RAFYRCQATRLMTGAGNILKKHAADQARKAVSLQEVRSLAGDGDPVTRVFFEPSSYQCLE
NCGTVAVTLVRQGGDPDRTLTVDYRTEDGTANAGSDYEFTEGVVVFKPGETLKEVRVGII
DDDIFEEDESFLIHLSNLRVLAPDGEQSEGTAPDPSVACLGPACTATVTIFDDDHAGIFT
LEEAVCHVSESVGTVELKVLRTSGARGVVTLPYKTLEGTARGGGEDFEDAHGVLEFNNDE
IFKSIKVRIIDDEEYEKNKTFYLEIGTPHLVGNKDSKDKGEEEEEEVLEDEEQRRVAEMG
RPMLGDHVKMEIIIEESYEFKNTVDKLIKKTNLALLVGTNSWRDQFIEAITVSAGEDDDD
EDCGEEKLPSCFDYVMHFLTVFWKVLFAFVPPTDYWNGWACFVVSICMIGLLTAFIGDLA
SHFGCTVGLKDSVTAVVFVALGTSVPDTFASKVAAIQDQYADASIGNVTGSNAVNVFLGI
GVAWSIAAIYQNSQGREFRVDPGPLAFSVTLFTIFAFISVGVLMYRRRPDIGGELGGPRT
AKVLTTMLFVSLWLLYILFSSLEAYCHIKGF
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggcccgctggacaccctccatctctccatccttagccgtcgttatggtgaccctcctc
ctgctgctgcagacctcctgggccgccggcctggaccacgcccctgacggctccgtctcc
atggttcccaccagccgtaactgcagcgaggcggagccgtgctcccggggggtcctgctt
cccgtctgggagccccggaacccgtcctcgggggacaaggtggcccgggccaccgtgtac
ttcgtggcactggtctacatgttcctcggcgtgtccatcgtggccgaccgcttcatggcc
tccatcgaggtcatcacctcgcaggagaaggagatcaccatcaagaagcccaacggggaa
accatgacgaccaccgtgcggatctggaacgagacggtgtccaacctcaccctgatggcg
ctgggctcctcggcgccggagatcctgctgtccgtcatcgaggtgatcggccacggcttc
acggcgggggccatgggcccagccaccatcgtgggctccgccgccttcaacatgtttgtc
atcatcggcatctgtgtgtacgtggttccggacggggagaccaggaaggtgaaacacctg
cgggtcttcttcgtcaccgcgtcgtggagcatcttcgcctacatatggctgtacctcatc
ctggccgtgatctccccgggggtggtgcaggtctgggaggcgctcctgacgctcttcttt
ttccccatctgtgtgctgttcgcctggatcgctgaccgccgcctgctcttctacaaatac
atgtacaaacactaccgggcgggcaagcaccgcgggatgatcatcgagaccgagggagac
cgccctctgccctccaaggtggacattgagatggacgggaagatgctgaactctcacggt
gtcgacttcctggacggtcctctgggtctggagctggatgagaaggatctggacgacgaa
gagaccaggagagacatggccaaaatcctgaaggagttgaaacagaaacatcctgacaga
gaggtggagcagcttatagagctggccaactatcaggtccttagtcagcagcagaagagt
cgagccttttaccgttgccaggcaaccaggctgatgacgggcgcgggcaacatcctgaag
aagcacgcggcggaccaggcccgcaaggcggtcagcctgcaggaggtgcgctcgctggcg
ggcgacggcgaccccgtgacccgggtgttcttcgagcccagctcctaccagtgtctggag
aactgcggcacggtggcggtgacactggtccgccaggggggagaccccgaccggaccctg
accgtggactaccgcaccgaggacggcacggccaacgcgggctctgactacgagtttacc
gagggggtggtggtcttcaaacccggcgagacgctgaaagaggtccgcgtgggcatcatc
gacgacgacatctttgaggaggacgagagcttcctgatccacctgtccaacctgagggtc
ctggctccggacggggagcagtccgaggggaccgcccccgacccctccgtggcctgcctc
ggccccgcctgcaccgccaccgtcaccatcttcgacgacgaccacgccgggatcttcacc
ctggaggaggcggtgtgccacgtgagcgagagcgtgggcaccgtggagctgaaggtgctg
cggacctctggggcgcggggcgtggtcacgctgccctacaagaccctggaggggacggcc
cgcggcggcggcgaggactttgaggacgcccacggtgtcctggagttcaacaatgacgag
atctttaagagcatcaaggtgcggatcattgatgatgaggagtatgagaagaacaagacg
ttctacctggagatcggaacgcctcacctggtgggaaacaaagactccaaagataaggga
gaggaggaggaagaggaggtcctggaggatgaagagcagcgtcgtgtggctgaaatggga
aggccgatgttaggagaccacgtcaagatggagatcatcatcgaggaatcatacgagttc
aagaacacggtagataagctgatcaagaagaccaacctggctctgctggtggggaccaac
agctggagagaccagttcatagaggccatcacggtcagcgctggtgaggatgatgatgat
gaggactgtggggaggagaagctgccttcgtgtttcgactatgtgatgcactttctgacc
gtcttctggaaagttctgtttgccttcgtccctccgacagactactggaacggctgggcc
tgcttcgtggtgtccatctgcatgattggcctgctcacagccttcataggagatcttgct
tctcacttcggctgcacggttggactgaaagactcggtcaccgctgtggtctttgtggcg
ttaggaacctcggtaccagacacatttgcaagtaaggtcgcagcgatacaagaccagtat
gcagacgcctctattgggaacgtgacgggctctaatgctgtcaacgtctttctgggcatc
ggggtggcgtggtccatcgcggccatctaccagaacagccagggccgcgagttcagggtg
gacccgggcccgctggccttctctgtcacgctcttcaccatcttcgccttcatcagcgtg
ggcgtgctgatgtaccggcggcggcccgacatcgggggggagctgggggggccgcggacc
gccaaggttctgaccaccatgctcttcgtcagcctgtggctgctctacatcctgttctcc
tctctggaggcctactgccacatcaagggcttctga
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