Gadus morhua (Atlantic cod): 115559575
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Entry
115559575 CDS
T10832
Symbol
hps1
Name
(RefSeq) Hermansky-Pudlak syndrome 1 protein isoform X1
KO
K20193
Hermansky-Pudlak syndrome 1 protein
Organism
gmh Gadus morhua (Atlantic cod)
Brite
Membrane trafficking [BR:
gmh04131
]
Endosome - Lysosome transport
Others
BLOC-3 complex
115559575 (hps1)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
115559575
NCBI-ProteinID:
XP_030234306
Ensembl:
ENSGMOG00000018315
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Position
15:563172..576272
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AA seq
702 aa
AA seq
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MKCLLIASESAEVLFYWTDPEFRQNVQDQYGASQEEGQRPPAFEDSLNTLFAPIIISCST
MVDRLGDSYACFTTENQHNYVLHQFDECLYIAVNGDGQECEDDLRRKIYVMKKMIEVLFG
MVNLSSNLLRKELRPQDTEQRTGLWKHLQGLLETYSRLRENDQSFLVEAVERLIHPTLCE
QCIEFLERRLLPALNSSSERNGEEVLHSFILVHTKLLAFYSSRNTSTLSPSDLLALIVMT
QSMYPSNTDQEDPGPEDVESVSVSGLEMFYTPQPSPTNRSSSGSERTAREDTPMFEFVDP
DIQIAEDSLITLEVSPPDPLAPTRVFLEVSLKDGLYPMMPHSMYCRPLWPGITLVLLTKI
PNSSVAMSVYSYLEAFAKLEKRLSEGQEGPAAARGQPTVHDLRSKLDKFIKALGPCDIQV
PYSDIQVPYSDIQVPYSDIQTSQLQNVWSEFKKRAFTRGGPGFTRELIPWCKSMKTQLCG
VYKQCFLNGTTRGADAPQRLSPALQELAQAMVQEKLMDWKDFLLVKSKRNITMVSYLEDF
PGLVHFICVDRSSGQMIAPSLNITERSTSELGGGPLAQFIRGKVWGLVRTARQYLQKGYS
TVTLRDGDFYFCYFLWFENETGYKLDEVDLPVLPDDSPPIGVLARDYYRKLLRYYSKTHA
GEVVKCYELLTVHLGVIPTEYILQHCRQLASKLWEPSRNPLL
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgtctgctgatagcgagtgagagcgcggaggttctcttctactggaccgacccg
gagttcaggcagaatgtccaggaccagtacggagcgtcccaggaggagggccagaggccc
ccagcgtttgaggacagcctgaacacgctgttcgctcccatcatcatctcctgcagcacc
atggtcgaccggctgggtgacagctacgcctgcttcaccaccgagaaccaacacaactac
gtcttgcatcagttcgatgagtgtctttacatcgccgtgaacggagacggccaggagtgt
gaggacgacctgaggaggaagatctacgtgatgaagaagatgatcgaagtcctcttcggc
atggtgaacctcagcagtaacctgctccgtaaagaactgcgtcctcaagacacggagcag
aggaccgggctgtggaagcacctccagggtctactggagacctacagtcggctccgggag
aacgaccagagcttcttagtggaggcggtggagcggctgatccaccccacgctgtgcgag
cagtgcatcgagttcctggagcgccgcctgctgccagcgctgaacagcagctcagagcgg
aacggagaggaggtcctccactcctttatcctggtgcacaccaagctgctcgccttctac
tccagccggaacaccagcactctgagcccgtctgacctgctggctctcatcgtcatgacg
cagagcatgtacccctccaacactgaccaggaagaccctggcccagaggatgtggaaagt
gtgtcggtttcgggtctggaaatgttttacacaccacagccctcgcctactaacagaagc
tccagtggttcagaaaggacagcaagagaggacactcctatgtttgagtttgtggatcca
gacatacagatagcagaggacagcctcatcacccttgaggtctcgcccccggaccccttg
gcccccaccagagtgttcctggaggtgtccctcaaggacggcttgtatcccatgatgcct
cactccatgtactgccggccgctctggcccgggatcactctggtgctgctcaccaagatc
cccaacagcagcgtggccatgtcggtgtactcctacctggaggccttcgccaagctggag
aagcgtctgagcgagggccaggagggcccagccgctgccaggggccagccgaccgtccac
gacctccgcagcaagctggacaagttcatcaaggccctggggccctgcgacatccaggta
ccgtacagcgacatccaggtaccgtacagcgacatccaggtaccgtacagcgacatccag
acgtctcagttgcagaatgtgtggtcggagttcaagaagcgtgccttcaccagagggggc
ccaggcttcaccagagagctcatcccttggtgtaagagcatgaagacccagctgtgtggg
gtctacaagcagtgcttcctgaacgggaccaccaggggagccgacgcgccccagcgcctc
tcccccgccctacaggaactcgctcaggccatggttcaggagaaactaatggactggaag
gacttcctgttggttaagagcaagagaaacatcaccatggtgtcgtacctggaggacttc
cccggcctcgtccacttcatctgcgtggatcgatccagcgggcagatgatcgccccgtcc
ctcaacatcacggagcgcagtacctccgagctgggggggggccctctggctcagttcatc
agaggaaaggtgtggggtctggtccgaacagcgaggcagtacctccagaagggctactcc
accgtcacgctgcgcgacggagacttctacttctgttacttcctctggtttgaaaatgaa
accggctacaagttagacgaggtggacctgcctgtactccccgacgactcaccccccatc
ggagtgctggcccgggactattacaggaagctgctccgctactacagtaagacccacgcg
ggggaggtggtgaagtgctacgagctgctgaccgtccatctgggggtcatccccaccgag
tacatcctccagcactgcagacaactggccagcaagctgtgggagccctcccgcaacccc
ctcctgtag
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