Gadus morhua (Atlantic cod): 115559636
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Entry
115559636 CDS
T10832
Symbol
jag1
Name
(RefSeq) protein jagged-1
KO
K06052
jagged-1
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04330
Notch signaling pathway
gmh04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
115559636 (jag1)
04371 Apelin signaling pathway
115559636 (jag1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
gmh04090
]
115559636 (jag1)
CD molecules [BR:
gmh04090
]
Proteins
115559636 (jag1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
MNNL
EGF_TEN
JAG1
DSL
EGF_DL_JAG
EGF_2
EGF_Teneurin
JAG1-like_EGF2
EGF_CA
Motif
Other DBs
NCBI-GeneID:
115559636
NCBI-ProteinID:
XP_030234464
Ensembl:
ENSGMOG00000018944
LinkDB
All DBs
Position
15:6525474..6557499
Genome browser
AA seq
1225 aa
AA seq
DB search
MILRRCSVVAAAFLLSFLAKVSEGSGRFELQMLSMHNQNGELLNGQCCDGSPSTADQKCT
PDQCETFFKVCLKEYQSRVFPGGPCSFGAGSTPVLGGNTFTFKSSGRNERSRIDLPFRFA
WPRSYTLIVEAWDFETAGVEGQVIEMSSHSGMINPSPIWQKLTHNGHVAQFEYQIRVSCD
EHYYGFGCNKFCRPRNDFFGHYTCDSNGNKTCLEGWSGADCDTPICRQGCSTEHGFCSEP
GGCKCLYGWQGQYCDKCIPHPGCVHGTCVEPWQCLCGTNWGGHLCDKDLNFCGTHLPCLN
AGTCINTGPDKYQCTCAEGYSGANCERAEHACLSNPCANGGSCTETSQGYECQCGPGWTG
PSCSINVDECSPNPCSHGGTCQDLINGYKCHCPTQWTGKTCLIDANECDSKPCVNANSCR
NLIGGYFCECTPGWTDQNCDTNINDCKDQCQNGGTCKDLVNAYRCACAQGFTGDHCEQDV
DECVSAPCLNGGQCQNEVDGFKCLCLAGFSGNLCQLDVDYCLPNPCQNGAACFNLADDYY
CACPEDYEGKNCSHLKDHCRTTTCKVIDSCTVAVASNSTPGGERYISSNVCGPRGRCRSQ
AGGQFSCECQEGFRGTYCHENINDCESNPCRNGGTCIDKVSVYQCICGDGWEGEHCEINI
DDCSTSPCHNGGTCRDLVTDFFCECKNGWKGKTCHSRESQCDEATCNNGGTCHDEGDAFQ
CKCSPGWEGATCNIAKNSSCLPNPCEYGGTCVVSGDTFTCVCKEGWEGPTCTQNTNDCSP
HPCYNSGTCVDGDNWYRCECAPGFAGPDCRININECQSSPCALGSSCVDEINGYRCLCPP
ERTGPQCQEATRRYCSVNGHVTPDGAHWEEDCNTCNCANGKVACTRMSCGPKSCQLGAKG
RGGCPSGQSCVPIREGHCFVRSCVGLGECWRSGPPPATPKCHPSSAYQDNSCANITLTFD
KDTLPKGLTVEQVCKELRNLHMVKNLSLEHSVSVSCEPSASASNEIHVCISIEDHRLDRS
PIKELTDRMVDLVGKRSGNDTVISSIKELRVLSLDKTDYLVPLLSSVFIVIWVLVFVSLF
FWCVRRRRKQGGHGGSSGGVGSALSPGSEDNTTNNVREQLNQIKNPIEKHAGLSVAIKEY
EDKNAIIAKIRTNHPDPGDEDDKERHPPKARFAKQPAYAPVERDDKASAGVLSSAAPGKQ
PNWTNKQDNRDLETANSINRMDYIV
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atgattttgagacgctgctcggtggtggctgctgcctttttactctccttcctggccaag
gtgtcagagggatccggacgattcgagttgcaaatgttatcgatgcataaccagaacggg
gagctgctgaacggccagtgttgcgacggctccccgagcaccgcggatcagaaatgcacc
ccggaccagtgcgaaacctttttcaaagtctgcttgaaggaataccagtctcgagtcttc
cccggaggaccgtgtagtttcggagccggatctacccccgtcctaggagggaatacattt
actttcaagagctctggcaggaatgaaagatccaggatagatttgccgttccgttttgcc
tggccgaggtcctacacgttgatagtggaggcctgggacttcgaaaccgccggtgtcgag
ggacaggtgatcgagatgtcctcgcactccggcatgatcaacccctcgcccatctggcag
aagctgacgcacaacgggcacgtggcccagttcgagtaccagatccgggtcagctgcgac
gaacactactatggcttcggctgcaacaagttctgccggccccggaacgacttcttcggc
cactacacgtgcgactccaacggcaacaagacctgcctggagggctggtccggggcagat
tgcgacacacccatttgccgacaagggtgcagcaccgagcacggtttctgcagcgagcca
ggtggttgcaagtgtctctacggctggcagggccagtactgtgacaagtgcatccctcac
ccgggctgcgtgcacgggacctgcgttgagccgtggcagtgcctctgcggcaccaactgg
ggcggccatctctgcgacaaagacctgaacttctgcggcacccacctgccctgcctgaac
gccggcacctgcatcaacacggggcccgacaagtaccagtgtacctgcgccgagggctac
tccggggccaactgtgagcgagcggagcacgcctgcctgtctaacccctgcgccaacggg
ggcagctgcacggagaccagccagggctacgagtgccagtgtggccccggctggaccggc
ccctcctgcagcatcaatgtcgacgaatgcagtcccaacccgtgtagccacggaggaacc
tgccaggatctcatcaacggctacaagtgtcactgtcccacgcagtggacgggcaagacc
tgcttgatcgatgccaacgagtgcgacagcaagccctgtgtcaatgccaactcttgccgc
aacctgattggtggatacttctgcgagtgcacgcctggttggaccgaccagaactgtgac
acaaatatcaacgactgcaaggaccagtgccagaacggggggacctgcaaggacctggtg
aacgcgtaccgctgtgcgtgcgctcagggcttcacgggggaccactgcgagcaggacgtg
gacgagtgtgtgagcgcgccctgcctcaacggcggccagtgtcagaacgaggtggacggc
ttcaagtgcctctgcctcgccgggttctccggaaacctctgccagctggacgtggactac
tgcctgcccaacccgtgtcagaacggggcggcctgcttcaacctggccgacgactactac
tgcgcctgccccgaggactacgagggcaagaactgctcgcacctcaaagaccactgccgc
accaccacctgcaaagtgatcgatagctgcacggttgccgtggcgtccaacagcacgccg
ggtggggagcgttacatctcgtccaacgtgtgcgggcccagaggccgctgccggagccag
gccgggggccagttcagctgcgagtgccaggaaggcttcagaggcacatactgtcatgag
aacattaacgactgtgagagcaacccgtgtcgcaatggcggcacctgcatcgacaaagtc
agcgtgtaccagtgcatctgtggcgacggctgggagggagagcactgtgaaatcaacatc
gacgactgcagcaccagcccctgtcacaacggagggacctgtcgagacctggtcaccgac
ttcttctgcgagtgcaagaacggctggaaggggaagacctgtcactcccgggagagccag
tgtgacgaggcgacctgtaacaacgggggcacgtgccatgacgagggagacgccttccag
tgcaagtgttccccgggctgggagggagccacctgtaacatagccaagaactccagctgc
ctgcccaacccctgtgagtacgggggcacctgcgtggtcagcggagacaccttcacctgc
gtctgcaaggagggctgggagggccccacctgcacccagaataccaacgactgcagtccc
cacccatgctacaacagcggcacctgtgtggacggagacaactggtatcgctgcgagtgc
gccccgggcttcgcaggaccggactgccgcatcaacatcaacgagtgccagtcgtcccct
tgtgccctgggctccagctgcgtggacgagatcaacggctaccgctgcctctgtccgccg
gaacggacgggcccccagtgtcaagaagcgacgcgccgctactgcagcgtcaacggtcat
gtgaccccggacggcgcccattgggaggaggactgcaacacctgcaactgcgccaacgga
aaggtggcgtgcacacggatgtcgtgtggccccaagtcctgccagctgggcgccaagggc
cggggtggctgtccctcgggccagagctgcgtgcccatccgggagggccactgcttcgtc
cgctcctgcgtgggcctgggggagtgctggcgctccggcccgcccccggccacgcccaag
tgccaccccagctccgcctaccaggacaacagctgcgccaacatcaccctcaccttcgac
aaggacaccctgccaaagggcctgacggtggagcaagtgtgtaaggagctccggaacctg
cacatggtgaagaacctgtccctggagcactctgtgtccgtgtcctgtgagccgtcggcc
tccgccagcaacgagatccacgtctgcatctccattgaggaccaccgcttggacaggagc
ccgatcaaggagctcacggaccgcatggtggacctggtcggcaagcgcagcgggaacgac
accgtcatctcctccatcaaggagctgcgggtgctgagtctcgacaagacagactacctg
gtgccgctcctcagctccgtcttcatcgtgatctgggtcctggtgttcgtgtcgctcttc
ttctggtgcgtgcggcgccggcgaaaacagggcggccacggcggcagcagcggcggcgtg
ggctcggcgttgtcgccgggctcggaggacaacaccaccaacaacgtgcgcgagcagctg
aaccagatcaagaaccccatcgagaagcacgccgggctgtcggtggccatcaaggagtac
gaggacaagaacgccatcatcgccaagataaggacaaaccaccccgacccgggggacgaa
gacgacaaggagaggcacccgcccaaggcccgcttcgccaagcaaccggcgtacgcgccg
gtggagcgcgacgacaaggcgtcggcgggggtgctgtcgtcggcggcgccgggcaagcag
cccaactggactaacaagcaggacaacagagacctcgagacggccaacagcatcaacagg
atggactacatcgtatag
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