Gadus morhua (Atlantic cod): 115559787
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Entry
115559787 CDS
T10832
Name
(RefSeq) calpain-2 catalytic subunit-like
KO
K03853
calpain-2 [EC:
3.4.22.53
]
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04141
Protein processing in endoplasmic reticulum
gmh04210
Apoptosis
gmh04217
Necroptosis
gmh04218
Cellular senescence
gmh04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115559787
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
115559787
04217 Necroptosis
115559787
04218 Cellular senescence
115559787
09144 Cellular community - eukaryotes
04510 Focal adhesion
115559787
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gmh01002
]
115559787
Enzymes [BR:
gmh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.53 calpain-2
115559787
Peptidases and inhibitors [BR:
gmh01002
]
Cysteine peptidases
Family C2: calpain family
115559787
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_5
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
115559787
NCBI-ProteinID:
XP_030234736
Ensembl:
ENSGMOG00000018340
LinkDB
All DBs
Position
15:5769913..5778383
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AA seq
701 aa
AA seq
DB search
MAGIASKLQHDRERSQGIGGYTRAVNYYNQDFEALKRDCLERRRLFEDESFEAVTSSLGF
KDLGPNSYKVRGVKWQRPKDICRNPKFILEDATRTDICQGALGDCWLLAAIASLTLNKQV
LSHVVPPNQSFEHNYAGIFHFQFWQFGKWVDVVVDDRLPTKDGELLFVHSADSSEFWSAL
LEKAYAKLNGCYEALSGGSTIEGFEDFTGGIAEKHDLLKAGPPLFKIIRKALDRGSLLGC
SINITSAADSEAVTSRKLVKGHAYSVTGAEQVAYRGDQVQLIRVRNPWGEVEWTGRWSDN
SMEWRYVGDADRDRLKKSSEDGEFWMSFSDFLCQYSMLEICNLTPDALTDTGVKKWALSE
FEEGWRRGSTAGGCRNFTDSFWKNPQFVIKLEEVDDDPGEGEKGCTVIVGLMQKYKRRMR
KMGDDLEFMGFAIYEMPKEFSGSRQVHMKKRFFQTKCSQARSETFTNMREVCNRFCLPPG
EYLIIPSTYEPNHNADFYLRVFTEKQADFEEIDDPIKCDIEQIEVDEDDIDDRFKSLFGK
LSGKDSEMSMFELQKVLNKVVMKRADIKTSGFSLTTCRNMITLLDKDGTRKLGLLEFKIL
WTKIEKLLILYKGKDADGNGFMSTTEMRLAVEEAGFSLSSPLHQIIVARYSEPDLTIDFD
NFVCCVIRLEILFLTFKALDKDHDGRIELKPLEWLQLSMVL
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggctgggattgcctccaaactacaacacgatcgagaaagatcccaaggcattggcggg
tacacacgggcggtgaactattacaaccaggactttgaggcgctgaagagagactgcttg
gaacgcaggaggctgtttgaggatgagtcattcgaggctgtgacatcttccttaggtttt
aaagatcttggaccaaattcatacaaagtccgtggtgtcaaatggcagagaccgaaggat
atatgcagaaatccgaaatttatactggaagatgctacgagaactgacatttgtcaggga
gcacttggcgactgctggctcctagcagccatcgcgtctttgaccctcaacaagcaggtt
ctgtctcacgtcgtccctcccaaccagagcttcgagcacaactacgctggcatcttccac
ttccagttctggcagtttgggaagtgggtggacgtggtggtggacgaccgcctgccaacc
aaggacggcgagctgctgtttgtccactctgctgacagctcagagttctggagcgccctg
ctggagaaggcctacgctaagctcaatggctgctacgaggcgttgtcaggtggcagtacg
attgaaggctttgaggacttcaccgggggaatcgctgagaaacacgatctgctgaaggcc
ggacccccccttttcaagatcatcagaaaggccctggacagaggctctctcctgggctgc
agcatcaacatcaccagtgcggccgattccgaagcggtcacgtctcgtaagctggtcaag
ggccacgcctactcggtgactggagcagagcaggtggcgtacagaggagaccaggttcag
ctgatccgcgtgaggaacccatggggggaggtggagtggaccgggaggtggagtgacaat
tctatggagtggcgctatgtgggggacgcggaccgagacagactgaagaagagctctgaa
gacggagagttttggatgtccttttcggatttcctgtgtcagtattccatgctggagatc
tgcaacctcacacccgacgcgctcacagacacgggggtgaagaagtgggccctgtctgag
tttgaggagggctggagacggggctccacggcggggggatgcaggaacttcacggactct
ttctggaagaacccccagttcgtcataaagctggaggaggtggatgacgacccgggtgag
ggggagaaggggtgcacggtcatcgtgggtctgatgcagaagtacaagcggcgcatgagg
aagatgggagacgacctggagttcatgggcttcgccatttatgagatgcctaaagagttt
tctgggagcaggcaagtgcacatgaagaagaggttcttccagaccaagtgttctcaggct
cgctccgagaccttcaccaacatgcgagaagtttgcaatcgcttctgccttcctcccggg
gagtacctgatcatcccgtccacctacgaacccaaccacaacgcagacttctacctgcgc
gttttcacagagaaacaagccgatttcgaagagatcgatgacccgattaaatgcgacatt
gaacagattgaggtggatgaagatgatatagatgacaggtttaagagtctgtttggaaaa
ctctctggaaaggattcggaaatgtccatgtttgaactgcaaaaggttctcaacaaagtg
gtgatgaagagggctgatatcaagacctctgggtttagcttaactacatgtcgcaacatg
atcactctactggataaagacggaaccagaaaacttggccttctggagtttaagatcctg
tggactaagattgagaaactgctgattttgtacaaggggaaagacgcagacggaaacggc
ttcatgagcacgactgaaatgcgcttggctgtcgaagaggctgggttttccctcagcagc
cccctgcatcaaatcatcgtggctcgctacagcgagccagacctcaccattgactttgac
aactttgtctgctgtgtgattcgtctggagattctcttcttaaccttcaaggccttggac
aaagaccacgatggcaggatagagctgaagcctctggagtggctgcagttgtccatggtt
ttgtag
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