Gadus morhua (Atlantic cod): 115559809
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Entry
115559809 CDS
T10832
Name
(RefSeq) paired box protein Pax-2a isoform X1
KO
K15608
paired box protein 2
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmh03000
]
115559809
04131 Membrane trafficking [BR:
gmh04131
]
115559809
03036 Chromosome and associated proteins [BR:
gmh03036
]
115559809
Transcription factors [BR:
gmh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
115559809
Membrane trafficking [BR:
gmh04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
115559809
Chromosome and associated proteins [BR:
gmh03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
115559809
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Pax2_C
HTH_23
HTH_32
Homeodomain
DUF6115
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
115559809
NCBI-ProteinID:
XP_030234777
Ensembl:
ENSGMOG00000012561
LinkDB
All DBs
Position
15:11446140..11478758
Genome browser
AA seq
424 aa
AA seq
DB search
MDIHCKSDPFSAMHLSHVGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQ
LRVSHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDR
LLAEGVCDNDTVPSVSSINRIIRTKVQQPFHPSPDGSITPLSPPGHTIVPNTASPPVTSA
SNDPVGSYSINGILGIPRSNGEKRKRDEVLWSGNHLDGRKIGHYGSDGSGPGSDSQGSVE
SLRKHLRADAFTQQQLEALDRVFERPSYPDVFPTSEHIKPEQANEYSLPSHPGHDEAKPS
LSSSASSDLASSVSQTYSVVTGRDMASTTLPGYPPHVPPTGQGSYPTSTLAGMVPGGDFS
GNPYSHPQYTTYNEAWRFSNPALLMPRPVAQHHPLLPRPMTATSYHGDRYKLQGHGYGPH
IVPV
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggatattcactgcaaatcggaccccttctcggcgatgcacctatcccatgtagggcat
ggcggggtgaaccagctcggcggggtgtttgtgaacggcagacccctgcctgacgtcgtc
aggcagcggatagtcgagctggcccaccaaggggtcaggccgtgtgacatctcccgacaa
ctgcgggtcagtcacggctgcgtcagcaaaatcctcggcaggtactacgaaacgggcagt
attaaacccggggtcattgggggctccaaaccaaaggtcgcgactcccaaagtagtggat
aaaatagcagactataaacgacagaaccccaccatgttcgcttgggagatccgggaccgg
ctcctggcggagggggtctgcgataacgacaccgtcccgagcgtctcctccatcaacagg
attatccgcaccaaggtccagcagcccttccacccgtccccggacggctccatcaccccg
ctgtccccgcccggacacaccatagtgcccaacacagcctccccgcctgttacgagcgcg
tccaacgatcccgtcggttcctactccatcaacggcatcctgggtatccctcgctccaac
ggggagaagaggaaacgagacgaagtgctctggagtggaaaccacttggatggaaggaaa
ataggacattatggttctgacggctcaggcccgggcagtgactcccagggcagcgtggag
agcctcaggaagcacctgcgagcggacgccttcacccagcagcagctggaggccctggac
cgcgtgttcgagcggccatcttaccccgacgtcttccccacctcagaacacatcaaaccc
gagcaggccaacgagtactccctcccatcccatccgggacacgacgaggcgaagcccagc
ttgtcctccagcgccagctctgacctggcctccagtgtgtcccagacctactccgtagtc
accggtcgagacatggccagcacgaccttgccggggtaccccccccacgtccccccgacg
ggccagggcagctaccccacctccacgctcgccggcatggtgcccggaggggacttctct
ggaaacccctactcccacccccagtacacaacctacaatgaagcctggaggttcagcaac
ccagcgttactcatgccgcgtcccgtggctcagcaccacccactgctgccacggcctatg
accgccactagttaccacggcgaccgctacaagctgcagggccacggctacggaccgcac
atcgtccccgtctga
DBGET
integrated database retrieval system
