Gadus morhua (Atlantic cod): 115559892
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Entry
115559892 CDS
T10832
Symbol
spast
Name
(RefSeq) spastin
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmh04131
]
115559892 (spast)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gmh04812
]
115559892 (spast)
Enzymes [BR:
gmh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
115559892 (spast)
Membrane trafficking [BR:
gmh04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
115559892 (spast)
Cytoskeleton proteins [BR:
gmh04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
115559892 (spast)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
RuvB_N
TIP49
AAA_22
AAA_5
MIT
AAA_16
AAA_14
Mg_chelatase
AAA_2
NPHP3_N
IstB_IS21
DUF815
AAA_33
nSTAND3
RNA_helicase
AAA_24
AAA_7
Ribosomal_L20
Guanylate_kin
Motif
Other DBs
NCBI-GeneID:
115559892
NCBI-ProteinID:
XP_030234908
Ensembl:
ENSGMOG00000018909
LinkDB
All DBs
Position
15:6606565..6612048
Genome browser
AA seq
483 aa
AA seq
DB search
MASRMSSSKGKSNSDIIKGYHKQAFEYISVALKIDEDDTGVKEEAVQWYKKGIEDLQRGI
AVEVTGEGDQYERTKRLQDKMVTNLDMAKERLSLLEATLESTRGLPAPRSPQNGGSQPAP
LTKPAPKGPALAGGASSQVRPSPPGRPAPRTINPKVTPQAGRGPTVKGAAASKQPRKSDM
KNFKNVDSKLANMILNEIVDSGPAISFEDIAGQELAKQALQEIVILPALRPELFTGLRAP
ARGLLLFGPPGNGKTMLAKAVARESDSTFFNISASTLTSKYVGEGEKLVRALFAVARELQ
PSIIFIDEVDSLLCERSEREHEASRRLKTEFLLQFDGVQSGGDDRVLVMGATNRPQELDE
AALRRFVKRIYVALPDEETRLKQLTHLLGKQGELLNQKELAHLAKVTAGYSGSDLTSLAK
DAALGPIREMGPEQVKSVAISEMRRMRLKDFEDSLKRIKPSVSPQTLGLYVKWNKDFGDT
TAF
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccagaatgagtagcagcaaaggcaaaagcaatagcgacattattaaaggctat
cataaacaggcattcgagtacatatccgtagcgctaaagatcgacgaggatgatacagga
gtcaaagaggaggctgtccagtggtacaagaaaggcattgaggaccttcaacgtgggatt
gccgtagaagtcacaggagagggagaccagtatgaaaggacaaagagactccaagataag
atggtcaccaatctcgacatggcaaaagaacggctctcacttttggaggccactttggaa
tctacaagaggcctcccagctcccagaagtccccagaatggtggaagccagccggccccc
ctaaccaagcctgccccaaaaggcccggctctagctggtggcgcctccagtcaggtcagg
ccgtccccccctggcaggccagcccccagaaccatcaacccaaaggttaccccacaggca
ggcagagggccgactgttaaaggtgcggcagcgtcgaagcaaccccgcaagagtgatatg
aaaaacttcaaaaacgttgacagcaaactggccaacatgatcctcaatgaaattgttgac
agtggaccagccatatcttttgaggacattgccggacaggaactagcgaagcaagcgctt
caagaaattgtcattcttcccgcattgaggccagagctcttcaccggcctgagggctcca
gccagagggctgcttttgtttggtccccctgggaatggaaagaccatgttggccaaagca
gtcgccagggagtctgactctaccttcttcaacatcagcgcttctaccctgacctctaaa
tacgtgggagagggtgagaaacttgtgcgagctttgttcgctgtcgcccgggaactacag
ccatcaatcatcttcattgacgaggtggacagcctgctctgcgagaggagcgagagagag
cacgaggccagccgtcgcctgaagaccgagttcctcctccagttcgatggcgtgcagtca
gggggggatgacagagtactagtcatgggagcaacaaaccggccccaggagctggatgag
gcagcactgcgacgctttgtcaaaaggatatacgtggccttgccggatgaagaaactaga
ctcaagcagctcacacatctcctaggaaagcaaggggagctactgaaccaaaaagagctc
gcacatcttgccaaggtgacagctggttactcaggaagtgacctcacctcgttagccaaa
gacgccgctctgggacctatcagggaaatgggacccgaacaggtgaagagcgtggcgatt
agcgagatgcggcgcatgaggctgaaggactttgaggattccctgaagcgtatcaagccc
agtgtcagcccacagaccttgggtctgtatgtgaaatggaataaagactttggagacacg
acagctttctaa
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