Gadus morhua (Atlantic cod): 115560020
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Entry
115560020 CDS
T10832
Symbol
cfap43
Name
(RefSeq) cilia- and flagella-associated protein 43
KO
K24223
cilia- and flagella-associated protein 43
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gmh03037
]
115560020 (cfap43)
Cilium and associated proteins [BR:
gmh03037
]
Motile cilia and associated proteins
Tether/Tether head (T/TH) complex
115560020 (cfap43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CC_Cfap43
Beta-prop_EML
Beta-prop_THOC3
Beta-prop_EML_2
WD40
Beta-prop_WDR5
WD40_CDC20-Fz
CFAP43_N
Beta-prop_WDR3_1st
WD40_WDHD1_1st
WDR55
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
Motif
Other DBs
NCBI-GeneID:
115560020
NCBI-ProteinID:
XP_030235156
LinkDB
All DBs
Position
15:complement(14132954..14154926)
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AA seq
1648 aa
AA seq
DB search
MDEIGSLEVRWAQGFAKQRVVFIDTITACYTCGNHIVFLNIDSKKRTVLQSPGKGIGAFT
ASGTSRVLAVSEQRLNPSIFVLSYPELKLKHELKGTATLDYTSLALSDVGPYLCCYSSLP
DHTITVWNWENAEIICTQPQAGKDVIYLVFNPMNWQQICALGSKTLTVWNIEKSDTHHIL
MKRELHLPAADGSLIEREGPPSHIVNGRLTYWGPQMPASAIAGLKGVRADGFLERRTPRL
TPLAACWTPAAELYVGCQEGYLLLANPDAPSVRILYNPTAPDANPELKDGGFQSLALHSD
GLYVAGKDHLLHCLKVNGTRVEISQTLEVEEAIRTIVFSPDYNSLLLVSSSGQIYRHQPL
KPGSMENILDVLTGGFVAAASMGQDTFVSLRECGELQQWSSEGDLTGSLSLRTQVSCLAC
CPASHYAAIGTLSGHLLFVDLSSAGRPRLVLKIHLYRRPVDCLVFDEGGNILVCASDSHI
FLLDAKPSKTFAVIGYTVAPGRPVLSLSTQHKRGSERVQVLALCPGPKDPKNGGGGGGGG
GGGGGSLFHLLSLSLKELSGPSCADAHGRLSANTFQASTYEAPRALQSCVLGVGEIFACC
EELKTLQRFKVSQDAGGVPGPTVCQLGPEEEVEGHPLGPSLLALSPHGSWLASVGRDGLL
RLRTTAALDRYAEIECHSCRLGGAGGLSFSADGQTLVTAGLGDGSLVCTRLRTETSGSSE
AGEATYYCQSAARQLENVLKVENAALGAMTEGPQGSLPPLGSPRPGTEEVSEVSDATEMS
PELDEGDPNLTSDPTWLETREEAVLEAEQQRYSEKKEEIRKGIKQLLDTSGERMLANEEL
PDIWRLDGHEFNLDVGEQRRLEVDGEREVATVREEIEMGNLAKSYLRELLKRDCWDSMKV
KGKAIKGFHSDLEVKNYPMKERTGKELDDLLRVESIRAIETANRIVSSERRERRERRERG
GGSDVQAAALTGSFAGQLGCSNPHLYDQFNLHVTEQKINQITLLQDVICRVKKAFNGEFD
GVRKQKEQEMSRVREKNRRMAEIMGDLEANRELWEPTLGDSEQPERALTVEDSEITVEKY
LTPQQKKIEEEKKKLEEQMLLAAKGDNSRDRALGDMMGGAIQVKKEDILKKEVIQPEFAV
CKPELQWSDEEKKIYKDYEKKAKDLSEEQDKYKKTLESEMKKMQASILESTQGFDEVLAK
LFERKLKSETVIYQEELKIAHLVYSMLIEEEIRNRERELVLSMERRRADKNAIVEELRNV
SEGVELCRKAYDNVVAEDRLLDKGFRKQFFDVQAHVVDHLYKLFKHRPRVQRMRDQADNK
PFNKRFSLGGAASDGLGQMLQAMEELDSPENTPAGLEPTVWERFCLVRRAKVEGEQQVKV
KALTLAEMQAFLQKRTDEDETAKHEIQTLMDEINGLREQKVRFQLDLLVQVLLRQGQVEV
EVSPALCIPDHRDSVMHHRSVVEDLSANIKTLGGQKIATMVECKDFRKGIIQLEWEQRRI
QMQTEHYDMQTRDIQKLHLSKEQQEYLNQMDLEMVDQGSSLEKHTAFDDKSPQEKIRQVS
MRAAIKAEQIAVLDQELAEMEVAVSERSHIYDSTAVEADQGVEREAELYQEIVQLKNLKH
LARTQAQELALLREQLEVSRMKNFPTLN
NT seq
4947 nt
NT seq
+upstream
nt +downstream
nt
atggatgagattgggagtctagaagtcaggtgggcacaggggtttgcaaagcaaagagtg
gtgttcattgacacgataacagcatgttatacgtgtggaaaccacatcgttttccttaac
attgactccaaaaagagaactgtcctccaaagccctggcaaaggcatcggtgcattcaca
gccagtgggacttctagggttttggctgtctctgagcagaggctgaacccttcaatattc
gtgctcagctatcctgaactcaagttaaaacatgagctgaaaggcacagcaacgcttgac
tatacttctctggcgttgagcgatgtcggtccatacttatgctgctattcctctctgcca
gatcataccatcacagtgtggaactgggaaaacgcagagataatctgtactcaaccacaa
gctggaaaagatgtaatttatttggttttcaacccaatgaattggcagcagatatgtgct
ctgggttcaaaaaccctcacagtgtggaacatcgagaagagcgatacacatcacatcctg
atgaaaagagaacttcatctcccagcagccgatggctccctgatcgagagagaaggcccg
ccctcacacattgtgaacggcaggctcacctactggggccctcagatgccagcgtctgct
atagccggcctaaaaggagtcagggcagatggctttctggagcgtaggacccccagactg
accccactggccgcatgctggacccccgccgctgagctctacgtaggctgtcaggagggg
tacctgctgctggccaacccggacgccccttctgtccgcatcctgtacaaccccacagct
cctgatgcaaaccctgaactcaaagatggtgggttccagagtttggctcttcacagtgat
ggcttgtatgttgcaggaaaggatcatctcctgcactgcttgaaggtaaacgggaccaga
gttgagatctcccagacgcttgaagtggaggaggccatcaggaccattgtcttttcccct
gactacaattccttactattggtctcaagctcggggcagatctacagacaccaaccgctc
aagccgggttcgatggaaaacatcctggatgtcctcactggaggctttgtagctgcagct
tccatgggccaggatacgtttgtgtcattgagggagtgtggtgaactgcagcagtggtcc
tctgagggcgatctgacagggtcactatcccttcgaacccaggtctcctgtctagcctgt
tgtcctgcttcccactatgctgcgattggaaccctctcaggccacctgttgtttgttgat
ctgagcagcgcggggcgaccgcgcctcgtcctcaagatccatctgtaccgcaggcccgtg
gactgcctggtgtttgacgaaggaggaaacattcttgtctgtgcgtccgattcccacatc
ttcctactggacgccaaaccgtcgaaaacatttgcggtcataggatacacagtcgctccc
ggcaggcccgttctatccctgtccacccaacacaagagaggttctgagcgggtgcaggtt
ctagcgctgtgccccggacccaaggaccccaagaacggagggggaggaggaggaggagga
ggaggaggaggaggaagtcttttccacctgctctctctctctctgaaggagctttcaggt
ccaagttgcgcggacgcacacggccgtctatctgcaaacactttccaggcgagcacgtat
gaggcgccacgtgcactccagtcatgcgtgctgggcgtcggggagatctttgcgtgctgc
gaggagctcaagactttgcagagatttaaagtgtcccaggatgcaggcggtgttcccggg
ccaacggtgtgccagctggggccggaggaggaagtggagggtcatcctctggggcccagc
ctcctggccctgtcccctcacggctcctggctggcgtcggtgggaagggacggcctgctg
cgactgcgtaccaccgccgctctggataggtacgctgagatagagtgtcactcgtgtcgc
ctgggaggcgctggtggcctctccttctctgccgacggccagacgctagtcactgcaggc
ttgggggacggttcccttgtctgcactaggctgagaactgaaacgtctggcagctcagag
gccggagaagccacatattactgccaaagtgccgctcggcaattggagaacgtcctgaaa
gtagagaatgccgcgctgggggccatgactgagggcccccaagggtccttgcctccttta
ggctccccacgcccagggacagaggaggtcagtgaggtcagtgacgccacggagatgtca
ccagagctggacgagggggaccccaatttgacctccgaccccacctggctggaaaccaga
gaagaggcggttttggaggcggagcagcaacggtattccgagaaaaaggaagaaataaga
aaaggcataaaacaattgcttgacactagtggggagaggatgctggcgaacgaggagctc
ccagatatctggcgtctggacgggcacgagttcaacttggacgtgggcgagcagaggagg
ttagaggtcgacggagagcgggaggtcgccacggtgagggaagagatagaaatggggaac
ctggccaaaagctacctgcgtgaactcctcaaaagagactgctgggactccatgaaggtg
aaaggaaaggccatcaagggcttccattctgaccttgaagtgaagaactatccgatgaag
gagcgaacagggaaagaactggacgatctcctcagggtggaaagtatcagagccatagag
acggccaaccgcattgtaagcagcgagaggagggagaggagggagaggagggagaggggg
ggggggtccgacgtccaggccgcagctctgaccgggagtttcgcgggccagctcggctgc
tcgaacccccacctctacgatcagttcaacctgcacgtcacagagcagaagatcaaccag
ataactctgctccaggatgtgatctgcagagtcaagaaggcgttcaacggcgagttcgac
ggcgtgcgcaagcaaaaggagcaggagatgagccgtgtccgggagaagaaccggcgcatg
gcggagatcatgggggatttggaggccaaccgggagctgtgggagcctaccctcggggac
agcgagcagccagagagggccctcactgtggaggactcagagataacagtagaaaagtac
ctcaccccgcagcaaaagaagattgaggaggagaagaaaaaactggaggaacaaatgctt
ttggctgccaagggagataactccagagacagagcgctgggggacatgatgggaggggcc
attcaagtcaagaaagaagacatcttgaagaaggaagttattcagcctgagtttgctgtg
tgcaaaccggagctgcagtggagcgacgaggagaagaagatctacaaagactatgagaag
aaggccaaggatctcagtgaagagcaggacaaatacaagaagacactggaaagtgaaatg
aaaaaaatgcaggcgtccatattggagtcaacacaagggtttgatgaagtcttggccaaa
ctgttcgagaggaaattgaaatcagagacagttatataccaggaggagctgaagatagcc
cacctggtgtactccatgttgatagaggaggagataaggaaccgggagagagagctggtg
ctcagcatggagaggcggagggcagacaagaacgcaatcgtggaggaactgaggaatgtg
agcgagggtgtggagctctgtcgaaaagcctatgacaacgtggtggctgaggacagactt
ctggacaaagggtttaggaagcagttcttcgatgttcaagcacatgttgtggatcatctc
tataagctgttcaagcacagacccagagtccagaggatgagggaccaagcggacaacaag
ccttttaataagcgcttctcgctgggcggggcggccagcgacggcctgggccagatgctg
caggccatggaggagctggactccccggagaacaccccggctggcctggagccgaccgtc
tgggagcgcttctgtctggtccgcagggccaaggtggagggcgaacaacaggtgaaggtg
aaggccctgaccctggccgagatgcaggcctttctccagaagcggactgatgaagacgag
acagcaaaacatgagatccaaactctcatggatgaaatcaacggcctgcgggagcagaag
gtgcgcttccagctggacctcctggtgcaggtgctgctgaggcagggccaggtggaggtg
gaggtcagccctgccctctgcatccccgaccacagggactctgtgatgcaccaccgcagc
gtggtggaggacctcagcgccaacatcaagacgctgggggggcagaagatcgccaccatg
gtggagtgcaaggacttccggaagggcatcatccagctggagtgggagcagcggaggatc
cagatgcagacggagcactacgatatgcagaccagggacatccagaagctgcacctgtcc
aaggaacagcaggagtatttaaaccagatggatcttgaaatggtggaccagggttctagt
ctggagaagcacaccgcctttgatgacaagagtcctcaggagaagatcagacaggtgtcc
atgcgggcagcgatcaaagcggagcagattgctgtgttggaccaagagttggcggagatg
gaggtggctgtgtctgagaggagccatatttatgactccacagccgtggaggccgaccag
ggcgtggagcgggaggcagagctctaccaagagatcgttcagctgaagaacttgaagcac
cttgccagaacccaggcccaggaactggccctactccgggaacagctggaggtctccagg
atgaagaactttcccacactcaattag
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integrated database retrieval system
