Gadus morhua (Atlantic cod): 115560030
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Entry
115560030 CDS
T10832
Name
(RefSeq) LOW QUALITY PROTEIN: integrin alpha-9-like
KO
K06585
integrin alpha 9
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04510
Focal adhesion
gmh04512
ECM-receptor interaction
gmh04514
Cell adhesion molecules
gmh04810
Regulation of actin cytoskeleton
gmh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115560030
04514 Cell adhesion molecules
115560030
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115560030
09142 Cell motility
04820 Cytoskeleton in muscle cells
115560030
04810 Regulation of actin cytoskeleton
115560030
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gmh04515
]
115560030
Cell adhesion molecules [BR:
gmh04515
]
Integrins
Integrin alpha subunits
115560030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP
Integrin_A_Ig_3
FG-GAP_3
Integrin_alpha
FG-GAP_2
Motif
Other DBs
NCBI-GeneID:
115560030
NCBI-ProteinID:
XP_030235172
Ensembl:
ENSGMOG00000015835
LinkDB
All DBs
Position
15:5133721..5194699
Genome browser
AA seq
1030 aa
AA seq
DB search
MCRRMAPPLTLTTGVRHVFCAFLWISLTYSYNIDLEHPIVFRGPESSFFGYSVLQHYHNN
TRWVLVGAPKANSSYSSSVHTPGALYKCRVHSNPEHRCTEIDLGRGNKQRESCGKTCHGD
RDDEWMGVSLARQDKPNGQILACAHRWKNVFYEKEQFILPHGYCSIIPPNLQGHNRALIP
CYEDHKQKYGEEHGSCQAGIAGVFTEELVVMGAPGSYYWTGTIKVYNMSSNTFYNLNKEE
VKSDHFKYLGYAVTAGHFSAPNVMDVAAGAPQSSGSGKAYIFKIEGGSLVKTFEASGSIM
GSYFGSSLCGVDLNRDGLSDLLVGAPMHSHVRDEGQVTVYLSRGNGLMEEAAVLKGDNAY
NAHFGESIAAIGDIDDDGYQDVAIGAPKEEEFAGAVYIYHGDSEGIITKYSMRLSGRTIS
PGLQMFGQSISGSVDMDGNGYADVTIGAFMADSVVLLRTRPVISVDVFIFLPVSINITVP
QCHKGPQNLNCFNLSACLQFRGRQVPGQIELLYNLTADADKRQRGQPSRIYFSQNGVPVS
VLSQQLNLDINREVCQHFTAYVKKDVKDVFTAISFEVAYSLGKHVLGASGGHLPALAPVL
RWKKGGKIAAKNETFFEKNCLSDDCAADLRLSGQLLLSGLHSKPHLALXRVRNISLNLTV
SNTGDDAYDTNIYFNFSREVFYINFWQKEEKGISCELVELDFLKCSVGFPFMRAQTQYHL
AVIFDTSXVSGENDTLRFLAQAKSANPEHKLEDNTLDLSLPLIHEVDTTLTGVVSPSSFV
YGSSVDASRFVQLEDMECNFQPLNLTFQVINNGPSRLPGSTVDIRLPNRLSGSGADMFHI
LDTQVANGRGNCTLHKNPSPCTIPQDQESIFHTIFAFFTKSGRRVLDCNRPGRACMTISC
SLGPQLKDEPLSIEVKLLLNTEILKRDSSSVIQFVTRAHVQVDNRAMEVPNGLPDEISLL
FEALHSQEPRGYVVGWIIAISLLVGILIFLLLAVLLWKMGFFRRRYRDIIEAEKNRKDSD
ESWDWMDKDH
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgtgcaggaggatggctccaccgctgaccctcaccacgggagtacgacatgttttctgc
gcgtttctttggatttccctcacttattcgtacaacattgatctagaacatcccatagtg
ttccgtggacctgagtcgagtttcttcgggtactctgtgctgcagcattatcacaacaat
acgcgctgggtactggtcggggcgccgaaggccaactcttcatacagtagctccgtgcac
acgcctggagccctgtacaagtgtcgtgttcatagcaacccggaacaccgttgcaccgag
attgacctgggaagaggaaacaagcagagggagtcttgtgggaagacgtgccacggcgac
cgggacgatgagtggatgggagtgagcttggcccgccaggacaagcccaacggccaaata
ctggcctgcgcccaccggtggaagaacgtgttctacgaaaaggagcagttcatcctgccc
cacggatactgctccatcatcccccccaacctgcagggccacaacagggcgctcatcccc
tgctatgaagaccataagcagaagtacggagaggagcacggatcgtgccaagcagggata
gcgggggtgttcacagaggagctggtggtaatgggggctccggggtcctactactggact
ggaaccatcaaggtgtacaacatgtcttccaacaccttctacaacctcaacaaggaggag
gtgaaatccgatcacttcaaatacctcggctacgcggtgaccgcgggacacttctccgcc
cccaacgtcatggatgtggccgctggggccccccagagcagcggcagtggaaaggcgtac
atttttaaaatcgagggaggatctctggtcaagacttttgaagcctccgggagtataatg
ggctcttactttggctcctcgttgtgtggggttgatctgaaccgggacggcctatcagac
ctgctggtgggcgcccccatgcacagccacgtgcgggacgagggccaggtcactgtttac
ctcagcaggggcaacggattgatggaggaggccgcagtcttgaagggagacaacgcctac
aacgcacatttcggagaaagcattgcggcgatcggggacatcgacgacgacggctatcaa
gatgtggccatcggtgctcctaaggaagaggagtttgcaggagctgtgtacatctaccac
ggggacagcgaggggattatcaccaagtactccatgcggttgtctggacgtaccatcagc
ccgggcctgcagatgttcggccagtccatctctggcagtgtggacatggatggcaacgga
tacgcagatgtcaccattggggcgttcatggccgacagcgtggtgctgttgaggacccgc
cctgtgatcagcgtggacgtgttcatcttcctgcccgtgtccatcaacatcacggtgcca
cagtgccacaaggggccccaaaacctcaactgcttcaacctctccgcctgcctgcagttt
cgtggacggcaggtgccaggacagatagagctgctgtacaacctgacggctgatgcggac
aagaggcagcggggccagccctcgcgcatctacttctcccagaacggcgttccggtcagc
gtgctgagccaacagctcaacctagacatcaacagggaggtgtgccagcacttcacagca
tatgtcaagaaggacgtgaaggacgtgttcaccgccatcagcttcgaggtggcctacagc
ctgggcaagcacgtcttgggggcttcgggcggacacctgcccgccctggcccccgtgctg
cgctggaagaagggcggcaagatcgctgcgaagaacgagactttctttgagaagaactgc
ctgtcggacgactgcgccgcggacctgagactcagcggccaactcttgctttctgggttg
cacagcaagccccacttggcactgnngagggttaggaacatctccctcaatctcaccgtc
tccaacaccggagatgacgcgtatgacaccaacatctacttcaacttctccagggaggtg
ttctacatcaacttctggcagaaggaagagaagggcatttcctgtgaactggtcgaactg
gacttcctgaaatgcagcgtgggatttccgttcatgagagcgcaaacccaatatcacctg
gccgtcatcttcgacaccagcncggtctccggggaaaatgacacgctgcggtttctggcc
caagcgaagagtgcgaaccctgagcacaaactggaggacaacacgttggacctctccctg
cctctgatccacgaggtcgacaccaccctcaccggagtggtgagccccagctccttcgtc
tacggcagctccgtggacgcctcgcgcttcgtccagctggaggacatggagtgcaacttc
cagcccctcaacctcaccttccaggtgatcaacaacggccccagcaggctgccgggctcc
acggtggacatcaggctccccaaccgcctgtcgggcagcggggccgacatgttccacatc
ctggacacgcaggtggccaatggcagggggaactgcacgctccacaagaacccctcgccc
tgcaccattccccaggaccaggagagcatcttccacaccatatttgccttcttcaccaag
tcggggcgccgggtcctggactgtaaccggcccggcagggcttgtatgaccatctcctgc
agcctgggcccccagttgaaggacgagcctctgagtatagaggtcaaactcctgctcaac
acggagatcctgaagagggacagctcgtctgtgatccagtttgtgaccagagcccacgtc
caggtggataacagggccatggaggtgccaaacggcctgccggatgagatctctctgctg
ttcgaggcgctccacagccaggagccgcgagggtacgtcgtgggctggatcatcgccatc
agcctactggttgggatcctcatcttcctgttgttagcggtgctgctctggaagatgggc
ttcttccgcaggcgctaccgggatatcatcgaggcggagaagaacaggaaggacagcgac
gagagctgggactggatggacaaggaccactga
DBGET
integrated database retrieval system
