Gadus morhua (Atlantic cod): 115560102
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Entry
115560102 CDS
T10832
Symbol
polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03020
RNA polymerase
Brite
Enzymes [BR:
gmh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
115560102 (polr1b)
Transcription machinery [BR:
gmh03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
115560102 (polr1b)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
115560102
NCBI-ProteinID:
XP_030235280
Ensembl:
ENSGMOG00000005847
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Position
15:2417950..2425545
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AA seq
1131 aa
AA seq
DB search
MDFSTKWDDLSKGPSLKHLSEPGFGVPKEKQHAAIQDITKAHTESFDQAVTDGLSRVVQA
IRPLEFTYNNDRVSLAFVDATIMKPMVAKGTVCRDLRVFPAECRARKCSYKSKIVADISW
SVNGVPKGIIKQNLGQVPIMVKSKLCNLHGLPPKQLIEHHEEAQEMGGYFIINGIEKVLR
MLIMPRRNHPIVLCRPKWKGRGQGYTPYGVSLHSVKEEHTAVNMNLHYLENGTMMLNFIF
NKELFFLPLGFVLKALVDFSDFQIYQELIKGQEHNSFYKSCAAEMLRMVMEQNCVTRSQT
LNYLGERFRVKLMLPEWYTNEQFAEYLLEECICIHLKSNVEKFYLLCMMTRKLFTFAKQE
CTDENLDSLMTQEALTSGQLYIRFLKERMASWLISVMLNMKKKRKVTEELSSGSMMKMFL
KATEITRAFEYFLATGTLVSRSGLGMVQNSGLSVVADKLNFIRYLSHFRCVHRGAAFAKM
RTTTVRKLLPESWGFLCPVHTPDGEPCGLMNHMTASCEMVSQSWSTVSLPGLLCSLGVTP
VDGMPSKAFSECYVVLLDGNVVGWMEDEIAPLVADSLRTFKVLREKRIPPWTEIVLVPKT
GKASMYPGLFIFTTTCRMMRPVRNLALGKEELIGTFEQLYINVGVMEDEIQPGVTTHQEL
FPHTMLSVVANLIPYCDHNQSPRNMYQCQMGKQTMGFPLQAFLNRSDNKLYRLQTPQSPL
VRPVMYDHYGIDEFPIGTNAIVAVISYTGYDMEDAMIVNKSSWERGFAHGCIYKTEMVDL
TQQMKGEDNLVFHADLADPKVRDKLDADGLPQIGAKLSYGDPFYSYINLNTGVSQINYYM
NQESSVVDNIKICSNDQGTGTFKRICITVRIPRNPTIGDKFASRHGQKGILSRLWPAEDM
PFTENGMSPDILFNPHGFPSRMTIGMLIESMAGKSASMHGLCHDATPFTFSEKNAALDHF
GVLLREAGYNYYGTERLYSGLSGLELEADIFIGVVYYQRLRHMVSDKFQVRTQGARDKVT
NQPVGGRNMQGGVRFGEMERDALLAHGTSFLLHDRLFNCSDRSEAEVCVPCGSLLSPLLE
KPNNSTIRHRKTVCMLCGRSDTIDTINVPYVFRYFVAELAAMNIKVKLHVK
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atggacttttcaactaagtgggatgatctctcgaaaggtccaagtttaaagcatttatcg
gaaccaggattcggcgtcccgaaggagaaacaacatgctgccattcaggacattactaaa
gcccacacggagtccttcgatcaagctgtcacagatgggctgagtcgcgtggtgcaggct
attcggccgttggagttcacatacaataatgaccgagtctccctcgcctttgtcgacgcc
accattatgaaaccaatggtggcaaaaggcacggtgtgccgcgatctgagggtgttcccc
gcagagtgcagggcaaggaaatgttcttacaagtcaaagattgtggcagatataagttgg
tcggtgaatggtgttcccaaaggcatcatcaaacagaacctgggccaggtacccatcatg
gtgaagtccaaactgtgcaacctgcacggcctccccccaaaacagctgatcgagcaccac
gaagaagcccaggaaatgggcggctacttcatcattaacgggatcgagaaggtcctccgc
atgttgatcatgccgaggaggaatcacccgatagtcttgtgcaggcccaagtggaagggc
aggggccagggatacactccgtacggtgtttccttgcacagtgttaaggaggagcacacg
gccgtcaacatgaaccttcactacctggagaacggcaccatgatgctgaacttcatattc
aacaaagagctcttctttctaccgcttggctttgtgctcaaggccctggtggacttctca
gacttccagatctaccaggagctgatcaagggccaggagcacaacagcttctacaagagc
tgcgccgccgagatgctgcgcatggtcatggagcagaattgcgtgacccgcagccagaca
ctcaactacctcggagaacgcttccgggtcaagctcatgctgcccgagtggtacaccaat
gagcagtttgcagaatacctcctcgaggagtgcatctgcatccacctcaagtccaacgtg
gagaagttctacctgctgtgcatgatgaccaggaagctcttcacgttcgccaagcaggag
tgcacggacgagaacctggacagtctcatgacccaggaggccctcacttctggacagctg
tacatacgcttcctcaaggagcggatggccagctggttgatcagcgtaatgctgaacatg
aaaaagaaacgcaaagtcacggaagagctgagctccggttccatgatgaagatgttcctg
aaggccactgagatcaccagggcgttcgaatacttcctcgcaaccggcactctcgtttcc
cgatctggtctgggcatggtgcagaactcggggctgagtgtcgtcgccgacaagctgaac
ttcatccgctacctgtctcacttccgctgcgtgcaccgaggggccgccttcgccaagatg
aggaccaccaccgtgcgcaagctgctgcccgagtcctggggcttcctgtgtcccgtgcac
acccccgacggagagccctgcggcctcatgaaccacatgaccgccagctgtgaaatggtc
tcccagagctggtccaccgtgagcctgcccggcctgctctgctccttgggtgtcacccct
gtggacgggatgcccagtaaagccttctcagaatgctacgtcgtgctcctggatggcaac
gtggtgggctggatggaggacgagatcgctcccctggtggctgactcactgcgcaccttt
aaggtcctgagggagaagaggattcccccgtggaccgagatcgtgttggttcccaagacg
ggcaaggccagcatgtaccccggcctgttcatcttcaccacgacctgccgcatgatgcgc
cccgtccgcaacctggccctgggcaaggaggagctcataggaaccttcgagcagctctac
atcaacgtgggcgtcatggaggacgagatccagccgggcgtgaccacacaccaggagctg
ttcccccacaccatgctgagcgtggtggccaacctcatcccctactgcgaccacaaccag
agccccaggaacatgtaccagtgtcagatgggtaaacagacgatgggcttcccgcttcaa
gcgttcctgaatcgctccgacaacaagctgtaccgcctgcagaccccccagagcccgctg
gtccggcccgtcatgtacgaccactacggcatcgacgagttccccatcggcaccaacgcc
atcgtggcggtcatatcctacacgggctacgacatggaggacgccatgatcgtgaacaag
tcgtcctgggagaggggcttcgcccacggctgcatctacaagacggagatggtggacctg
acgcagcagatgaagggcgaggacaacctggtgttccacgctgacctggcggaccccaag
gtgcgcgacaagctggacgcagacggactcccgcagatcggggcgaagctgagctacggg
gatcccttctacagctacatcaacctcaacaccggcgtgagccagatcaactactacatg
aaccaggagagctcggtggtggacaacatcaagatctgcagcaacgaccagggcacgggc
accttcaagcgcatctgcatcacggtgcgcatcccgcgcaaccccaccatcggggacaag
ttcgccagccgccacggccagaagggcatcctcagccggctgtggcccgccgaggacatg
cccttcacggagaacggcatgtcgcccgacatcctcttcaacccccacggcttcccctcg
cgcatgaccatcggcatgctcatcgagagcatggcgggcaagtcggcgtccatgcacggc
ctgtgccacgacgccacgcccttcaccttctcggagaagaacgcggcgctggaccacttc
ggcgtgctgctgcgcgaggcgggctacaactactacggcacggagcgcctgtacagcggg
ctgagcggcctggagctggaggccgacatcttcatcggcgtggtgtactaccagcggctg
cgccacatggtctccgacaagttccaggtgcggacccagggtgcccgcgacaaggtgacc
aaccagccggtgggcgggcgcaacatgcagggcggcgtgcgcttcggcgagatggagcgc
gacgcgctgctggcgcacggcacctccttcctgctgcacgaccgcctcttcaactgctcg
gaccgctccgaggcggaggtgtgcgtgccgtgcggcagcctgctgtcgccgctgctggag
aagcccaacaactccaccatccgccaccgcaagacggtgtgcatgctgtgcggccgcagc
gacaccatcgacaccatcaacgtgccgtacgtcttccgctactttgtggcggagctcgcc
gccatgaacatcaaggtcaagttgcacgtgaagtga
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integrated database retrieval system
