Gadus morhua (Atlantic cod): 115560329
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Entry
115560329 CDS
T10832
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 12-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
gmh Gadus morhua (Atlantic cod)
Brite
Pattern recognition receptors [BR:
gmh04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
115560329
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GFIT
Other DBs
NCBI-GeneID:
115560329
NCBI-ProteinID:
XP_030235578
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Position
15:complement(4414325..4423773)
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AA seq
1084 aa
AA seq
DB search
MDAPPERRETVAVCQRKIKSRLKKKFRSLLKGIATAGQQTDRNDFTEIIVFERGAQEVNK
EHEFRLIEASSRKPAKEEIPIKCEDIFKPLPGQDQQIRTMTTGVAGIGKTVLTQKFTLDW
AEGKANRDISFTFLFPFRELNLLEGKELSLVELLHHFFIETKEAGICSFDRFEVVIILDG
LDECRLPVDFKNNQIWTDVTKPTSVEVLLTNLIRGKLLPSARIWITTRPAAANQIPPKCV
NMVTEVRGFTDPQKEEYFRKRFREETLASTIIAHVKKSRSLHIMCHIPVLCRITATVLED
HFKTSKIGEEMPNTVTQMYSHFLRVQSIQADRKNHGRAEPDLQCSEIRAIIVTLGKLAFK
QLEKGNLIFYEADLAECDINIGAASEYSGVFTEIFKEECGLYQDKVFCFVHLSIQEFLAA
LYVFQSSINTGDNLLSEEQQPLWYDKHHLFYQKAVDMALQNENGRFDLFLRFLLGLSLET
NQIVLQGLIGKTGNTSLTNEKTVLYITEKLNGNLSLERSINLFRCLNELNYRYLVEEIQQ
FLTSGSLYNCLDHELWSVLPLILLTSVEELDIFDLKKYSVKTANTKCLLMLMPVVKDSKK
TLLNGCNLSEGCWGALASVLSTNSSRLRELDLSTNDLQDSGVKLLCAGLGSPHCTLDTLR
LTDCHLSERCCEALASVLSSKSSSLRVLDLSTNDLQDSGVKLLSAGLGSPHCTLETLRLN
GCQLSEGCCEALASVLSSNFSRLRELDLSTNDLQDSGVNLLCAGLGSPHCTLDTLRLTDC
HLSERCCEALASVLSSKSSSLRVLDLSTNDLQDSGVKLLSDGLKSPHCTLETLRLSGCLI
TQKGCDCLASALSSNPSHLRELALSYNHPGDSKVRRLSARLDTLSVENGGFRRLKPGLKK
YACEITLDPNTAHKIFSLSEDNRKVTRGYRGPSYPDHPDRFEPWYQVLCREVLTGRCYWE
VEWNFHVWIAVTYRGIERKGWGSEAFPGKNDKSWSLECTDHRYTAWYNDGKTDVPLLPAG
STRVGVYLDWPAGTLSFYRVPPGEGGSSDTLTHIHTFQSTFTQEDLLPGFRLEWPQSSVS
LCQI
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atggatgcccctccagagaggagagaaactgttgctgtgtgccaacgtaaaatcaagtct
cgtctgaagaaaaagttcagatctttgttgaaaggaatcgctacagcaggacagcaaaca
gatcggaatgacttcacagagataatcgtctttgagagaggcgctcaagaggtcaacaag
gaacatgagttcagactgattgaagcatcctcaaggaaaccagccaaggaggaaatacca
atcaaatgtgaagacatctttaagcccttaccaggccaagatcaacaaataagaacaatg
acaactggagtggccggcattggtaaaaccgtcttaacacaaaagttcacactggactgg
gccgaaggcaaagccaaccgcgacatatcctttacatttctcttcccttttagagagctg
aatttactggaagggaaagagttgagcttggtggaacttcttcatcacttctttattgag
acaaaagaagcaggaatctgcagtttcgaccggttcgaagttgtgatcatcttggatggt
ctggatgagtgtcgacttcctgtggacttcaagaacaaccagatctggactgatgtcaca
aagccgacctcagtggaggtgctgctgacaaatctcatcaggggcaagctgcttccctcc
gctcgtatctggataacaacacgccctgcggcagccaatcagatccctcctaagtgtgtt
aacatggtaacagaggtgagagggttcaccgacccacagaaggaggagtacttcaggaag
agattcagagaggagacgctggccagcacaatcatcgcccacgtcaagaaatcacgaagc
ctccacatcatgtgtcacatcccagtcttatgtcggatcactgctacagttctggaggac
cacttcaaaacatccaaaataggggaagagatgcccaacactgtgacgcagatgtacagc
cacttcctgagggttcagtccatacaggcagacaggaagaatcatggcagagctgaacca
gatctgcagtgttcagagatcagggcgatcattgttactttgggaaaactggcgtttaag
cagctggagaagggaaacctcatcttctacgaggcagacctggcagagtgtgacatcaat
atcggagcagcctcagagtactcaggagtgttcactgagatctttaaggaggaatgtggg
ctgtaccaggacaaggtgttctgctttgtccatctgagcatccaggagtttctggctgcc
ctttatgtctttcagtcctccatcaacactggtgacaatctgctctcagaagaacaacaa
cccttatggtatgataaacatcacctcttctaccagaaggcggtggacatggccttacag
aatgagaatggacgctttgacttgttccttcgcttcctcctgggcctctctctggagacc
aatcagattgtcctacaaggtcttattggaaagacaggaaatacatcactgaccaatgag
aaaacagtgctttacatcacagagaagttaaatggaaatctctctctagagagaagcatc
aatctgttccgttgtctaaatgagctgaactaccgttatctagtggaggagatccaacag
ttcctgacatcaggaagtctctataattgtttagatcatgaactgtggtcagttctgccc
ttgatcttactcacatcagtagaggagctggacatatttgacctgaagaaatactctgta
aagactgctaatacgaaatgtctgctgatgctgatgccagtggtcaaagactccaaaaaa
actctgctgaatggctgtaacctgtcagagggatgctggggagctctggcctcagttctc
agcacaaactcctctagactgagagagctggacctgagtaccaatgatctgcaggattca
ggagtgaagctgctctgtgctggactggggagtccacactgtacactggacactctcagg
ctgactgactgtcatctgtcagagagatgttgtgaagctctggcttcagttctcagctcc
aagtcctctagtctgagagttctggacctgagtaccaatgatctgcaggattcaggagtg
aagctgctctctgctggactggggagtccacactgtacactggaaaccctcaggctgaat
ggctgtcaactgtcagagggatgctgtgaagctctggcctcagttctcagctcaaacttc
tctagactgagagagctggacctgagtaccaatgatctgcaggattcaggagtgaatctg
ctctgtgctggactggggagtccacactgtacactggacactctcaggctgactgactgt
catctgtcagagagatgttgtgaagctctggcttcagttctcagctccaagtcctctagt
ctgagagttctggacctgagtaccaatgatctgcaggattcaggagtgaagctgctctct
gatggactaaagagtccacactgtacactggaaactctcaggttgtctggttgcctgatc
acacagaaaggctgtgattgtctggcctcagctctgagctctaacccctcccatctaaga
gagctagccctgagctacaatcacccaggagactcaaaagttaggcggctctctgctaga
ctggacactctcagtgtggagaacggtggattccggaggctgaaaccaggtctaaagaag
tatgcctgtgaaatcacactggacccaaacacagcacacaaaatcttctctctctctgag
gacaacagaaaggtgacacggggttatcggggcccgtcgtatcctgatcatccagataga
tttgagccctggtaccaggtgttgtgtagagaggttctgactggccgctgttactgggag
gtagagtggaattttcatgtttggatagcagttacatacagaggaatcgaaaggaaagga
tggggtagtgaagcatttcctggaaaaaacgacaagtcttggagtcttgagtgtactgat
catcgttacactgcctggtacaacgatggaaaaacagacgtacctctcctccctgctggc
tccaccagagtaggagtgtatctggactggcctgctggcactctgtccttctacagagtg
cccccaggtgaaggagggtcctcagacacactgacacacatccacaccttccagtccacc
ttcactcaggaggacctcctcccggggtttaggttagagtggccgcaatcctcagtgtct
ctttgtcagatttag
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