Gadus morhua (Atlantic cod): 115560350
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Entry
115560350 CDS
T10832
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
gmh Gadus morhua (Atlantic cod)
Brite
Pattern recognition receptors [BR:
gmh04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
115560350
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
115560350
NCBI-ProteinID:
XP_030235609
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Position
15:8918492..8928217
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AA seq
1089 aa
AA seq
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MKSDLCMNEPPDLKDGHPSIEERQHQGRSKVPSGPSVQQQHTEWKRIKENAHAFLDKEVE
KLGSVLFLDDPQCSESQREEKEVDGEEEEQRRHAIEGVLDITLLCMKQLKQEELADTLRS
KIVAAECQRKIKSHLKKKTQCVFEGIANAGESRPLNEIYTELYITERGIGEVNKEHEVRL
IETASRKPARQETPIRCEDIFKPLSEKDKPIRTIMTTGVAGIGKTILTHKFTLDWAEGKT
NQDIHFTFPITFRELNLVRDKKLSLVELLHHFFIETQIARISRYGRFQVVFILDGLDECR
LPLDFQNNPIWTDVTESTSVDVLLTNLIMGNLLPSARIWITTRPAAANQIPAECVDMVTE
VRGFTDPQKEEYFRKRFRDQELASKIISHIKTSRSLHIMCHIPVFCWITATVLEGFFKTS
QGEEEMAKTMTQLYSHFLRIQSIQGGMKYHGRAETDLQWSSESREIIVCLGKLAFNQLEK
GNLIFYEADLVECDIDIRAASVYSGVFTQIFKEDCGLYQDKVFCFVHLSIQEFLAALYVL
LSFIDTGVNLLSKEQPTSREDEFIIYQSAVGMALQSENGHLDLFLRFLLGLSLETNQNLL
RGLLGQTVSSSQTNQRTVSYIKERISGDLSPERSINLFYCLNELNDHSLVEEIQQYLISG
SLSGESLSPAQWSALVFILLTSEEELEVFDQTKYSASEEGLLRLLPLAKASKTYLLSGCH
LSERCCEALASVLSSNSSSLRELDLSTNDLQDSGVELLSAGLKSPHCTLETLRLNGCHLS
ERCCEALASVLSSNFSSLKELDLSTNDLQDSGVKLLSAGLGSPYCTLETLRLSGCQVTQE
GCFSLATALSSNPAHLRELDLSYNHPGDSGGALLSALLDNPRWRLDTLSLEHGGVWRMKP
ALKKYACELTLDPNTVHRRLSLSEDNRNVTVVKENQLYPQQQERFDLWLQVLCREGLTGR
CYWEVEREGGVNVGVTYREIQRRGNGVDSRLGGNNKSWGLRCYDCHYCALHNNNKTGIRL
PSPGSDRVGVYLDRPAGTLSFYRVSPGEGGSSDTLTHIHTFQSTFTEEDLLPGFGVWDED
CSVSLSQMY
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgaagagtgacttgtgtatgaatgaacctcctgaccttaaagatggacacccctccata
gaggagagacaacaccaggggaggtcgaaggttcccagtggtccgtctgtacagcagcaa
cacacagagtggaagcggatcaaggagaacgcacacgcttttctagacaaggaggtggag
aagctcgggagcgttctcttcctagatgacccacaatgctctgagagccagagggaggag
aaggaggtagatggtgaggaggaggagcagaggaggcacgccatagagggagtgcttgac
atcacactgctctgcatgaagcagttgaagcaggaggagctggccgacacactgaggagc
aaaattgttgctgctgagtgccaacgtaaaatcaagtctcatctgaagaagaagacccag
tgtgtgtttgagggaattgctaatgcaggagagtcaagacctctgaatgagatctacaca
gagctctacatcacagagaggggcattggagaggtcaacaaggaacatgaggtcagactg
attgaaacagcttccaggaaaccagccaggcaggaaacaccaatcagatgtgaagacatc
tttaaacccttatctgaaaaagataaaccaatcagaacaataatgacaactggagtggcc
ggcattggtaaaaccatcttaacacacaagttcactctggactgggctgaaggcaaaacc
aaccaggacatacacttcacatttcccatcacattcagagaactgaatttagtgagagat
aaaaagttgagcttagtggaacttcttcatcacttcttcattgaaacccaaatagcaaga
atctccagatacggccggttccaagttgtcttcatcttggatggtctggatgagtgtcga
cttcctctggacttccagaacaacccgatctggactgatgtcacagagtccacctcggtg
gatgtgctgctgacaaacctcatcatgggcaacctgcttccctccgctcgcatctggata
accacacgccctgcggccgccaatcagatccctgctgagtgtgttgacatggtgacagag
gtgagagggttcaccgacccacaaaaggaggagtacttcaggaagagattcagagaccag
gagctggccagcaaaatcatctcccacatcaagacatcaagaagcctccacattatgtgt
cacatcccagtcttctgttggatcactgctacagttctggagggcttcttcaaaacatca
cagggtgaagaagagatggccaagaccatgactcagttgtacagccacttcctgaggatt
cagtccatacagggaggcatgaagtatcatgggagagctgaaacagatctacaatggagt
tcagaaagcagggagatcattgtttgtctgggaaaactggcttttaaccagctggagaaa
ggcaacctgatcttctacgaggcagacctggtagagtgtgacattgatatcagagcagcc
tcagtgtactcaggagtattcacccagatctttaaagaggattgtgggctgtaccaggac
aaggtgttctgctttgtccatctaagcatccaggagtttctggctgccctttatgtcctt
ctgtccttcatcgacactggggtcaatctgctctcaaaagaacaaccaacctccagggaa
gatgaatttataatctaccagagtgctgtgggcatggccttacagagtgagaacggacac
ctggacttattcctccggttcctactgggcctctctctggagaccaatcagaatcttcta
cgaggcctgctgggacagacagtaagtagctcgcagacgaatcagagaacagtgtcttac
atcaaggagaggataagtggagatctctctccagagcgaagcatcaatctgttctactgt
ttgaatgagctgaacgaccattctctagtggaggagatccaacagtacctgatatcagga
agtctctctggagaatccctctcccctgctcagtggtcagctctggtcttcatcttactg
acatcagaagaggagctggaggtgtttgaccagacgaaatactctgcttcagaggagggt
cttctgaggctgctgccactggccaaagcctccaaaacatatctgctgagtggctgtcat
ctgtcagagagatgttgtgaagctctggcctcagttctcagctcaaactcctctagtttg
agagagctggacctgagtaccaatgatctgcaggattcaggagtggagctgctctctgcc
ggactgaagagtccacactgtacactagaaacactcaggctaaatggctgtcatctgtca
gagagatgctgtgaagctctggcctcagttctcagctccaacttctctagtctgaaagag
ctggacctgagtaccaatgatctgcaggattcaggagtaaagctgctctctgctggactg
gggagtccatactgtacactggaaactctgaggttgtctggctgccaggtcacacaggaa
ggctgtttttctctggccacagctctgagctccaaccccgctcatctgagagagctggac
ctgagctacaatcacccaggagactcaggtggtgcactgctctctgctctgctagataat
ccacgctggagactggacactctcagtctcgagcacggtggagtgtggaggatgaaacca
gctcttaagaagtatgcctgtgaactcacactggacccaaacacagtccacagacgactc
tctctgtctgaggacaacagaaatgtgacggtggttaaagagaatcagttgtatcctcaa
caacaagagagatttgacctctggctccaggtgttgtgtagagagggtctgactggtcgc
tgttactgggaggtagagagggaaggaggtgttaatgtaggagtgacatacagagaaatc
caaaggagaggaaatggtgttgacagcaggcttggagggaacaacaagtcctggggtctt
cgttgttatgattgtcattactgtgccttgcacaacaataacaaaacaggcatacgtctc
ccctcccctggctctgacagagtaggagtgtatctggatcggcctgctggcactctgtcc
ttctacagagtgtccccaggtgaaggagggtcctcagacacactgacacacatccacacc
ttccagtccaccttcaccgaggaggacctcctccctgggtttggggtatgggatgaagat
tgctcagtgtctctgagtcagatgtattga
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