Gadus morhua (Atlantic cod): 115560465
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Entry
115560465 CDS
T10832
Name
(RefSeq) VPS10 domain-containing receptor SorCS3-like isoform X1
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmh04131
]
115560465
Membrane trafficking [BR:
gmh04131
]
Endocytosis
Others
Others
115560465
Endosome - Lysosome transport
115560465
Endosome - Golgi transport
115560465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
GbpC
Motif
Other DBs
NCBI-GeneID:
115560465
NCBI-ProteinID:
XP_030235755
Ensembl:
ENSGMOG00000016469
LinkDB
All DBs
Position
15:complement(13903815..13950298)
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AA seq
1216 aa
AA seq
DB search
MFGIWSLWCSLAFVFSHLDHKFGARGEISCPALKRRHERLQVMPPETTGVKGSVVNNNRT
ELLNGLTVEYPIVDDGDPNSDGAPQQDLARESGMEDPFAQISANPYPNPDPKSKRRKRTI
RSVARRHAEVFERIPVGQAGPSLLETAQGVYSSRAEYRRSGEEGKGSGQRQTEPYLDTST
FALAGDSAHNQAMVHWSGHNSSVILILTKLYDFNLGAVTESSLWRSVNYGSTYTKMNDKI
RSRTVLSYLYVCPTNKRKIMLLSDPEMESAVLISSDEGASFEKHPINFYIQSLLFHPAQE
NWILAFSHDSKLYSSMDFGRKWLLVHDNVMPGRFYWAAVGLDKDQDVVHIETRIAKSRAQ
YVRCRAQRCTEANRQYLFPGYVDTNSLVVQDEYVFTQVTKSGRASYYVSYMREPFKQMQL
PKYCLPKDMHIISTDEKQVFAAVQEWNQNHTYSLYISDSPGVYFTLSLENLRTSRGPAGN
LLVDFYKVEGIHGMYLTNKLIDNRVKTFITYDKGQTWALLPAPTTDVLGNNLHCVLPFCS
LHLHLEMSENPYTSGRISSKDSVPGIVIATGNIGTELSSTNLGMFITSDAANTWRQIFEE
EHSVWFLDNGGALLAVLHSNTPLRHLWISLDEGKKWTRHSFSLAPLYVDGVMMEPEAENH
IITFFGHFSHRSEWQLIKIDYKGIFSRRCMDGDYQTWHLHNKAEPCVMGEKQVYMKRRPG
NRCMLTQDYSRIYSSEPCPCRSYDFECDYGFDRQSDGKCSPAFWFNPNTTTKSCSTSQSF
LNSTGYRKVLSNNCKEGGRSVFSPRRQACQPSPPRGLRLSTSQGELAAPAGTNVTFLVRL
DQGDSQKTHIQLHFGDGIKITYSNLSRTSDGIKHVYSATGIYRVTALAENSQGSDSSTLF
LHITSPVERVHLSAPMVVSRQREVNLTAVVWPSHSRTLTFFWWFDNSSEPRITLEGTVSH
TFQSEGTSKVTVQLSSGGVVIQDSKRITVKELFKSLLLSFSPALDDHNPDIGEWRADVGR
VVRRALAQASGFPADRLLVSLYPGLPTVGELFILPDTHTQSEHKKSTQEALERVSDTFIN
VLNQGLIQFELKPEVRIIVYMTQQTLAPHVDPGSIHSGPALLMLLSVVSVGLAAFFIYKF
KRKIPWIHVQAEDSQEKDPEVISTVGQNDSMSKVKLSEFPSQKDLLEKELEIRSRGGMGR
NMERVITREFPNCTNV
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgtttggaatttggtctctgtggtgctctttggcgttcgtgttttctcatttggaccac
aagttcggggcacgcggtgagataagttgcccggcattgaaacgcaggcacgagcgtctg
caggtgatgccgccggagacaacgggtgttaaaggctcagtcgtaaataacaacagaaca
gagttgctcaacggcttgactgtggaataccctattgttgacgacggggaccccaacagt
gacggagcgccgcaacaggatctagcgagagaatccgggatggaggacccatttgctcaa
atctctgcaaacccttaccctaaccctgacccgaagagcaaaaggagaaagaggacaata
cggagtgtggcaaggagacacgctgaagttttcgagcggataccagtgggtcaggctggg
ccaagtcttctggagaccgcgcagggagtgtacagctccagggccgagtacaggcgcagc
ggggaggaaggcaaggggtccggccagcggcagactgagccctacctggacacctccact
tttgctttggccggtgactccgcgcacaaccaggcgatggtgcactggtctggacacaac
agcagtgtgatcctgatattgaccaagctgtacgacttcaatctgggcgctgtaaccgaa
agctcattatggagatccgtgaattatggaagcacttacacaaaaatgaatgacaaaatc
cgctcgagaacggtgttgagttatctttatgtatgtccgaccaacaagaggaagataatg
ctgctgagtgaccctgagatggagagcgcagtgctcatcagctctgatgaaggggcgagc
tttgagaagcaccccattaacttttatatacagagcctcctcttccacccggctcaggag
aactggatactggcattcagtcacgacagcaagttgtacagttcaatggactttggaagg
aaatggcttctcgtgcacgacaacgtaatgccgggccgattctactgggcagcggtgggc
ttggacaaggaccaggacgtggtccacattgagactcgtatcgctaaaagccgagcccag
tacgtgcggtgccgggcccagcgctgtacagaggccaatcggcagtacctgttccctggg
tacgtggacaccaactccctggtggtgcaggacgagtacgtcttcactcaggtgacaaag
tcggggagggccagctattacgtgtcctacatgagggagccatttaagcagatgcagctg
cctaaatactgtcttcccaaggacatgcacatcatcagtacagacgagaagcaggtattt
gctgcagtgcaggagtggaaccagaaccacacatacagtctgtacatctcggactccccc
ggggtctacttcaccctctccctggagaacctgaggaccagccggggccccgcgggtaac
ctgcttgtggacttctacaaggtggaaggcatccatggcatgtacctgaccaacaagctg
atagacaaccgagtgaagaccttcatcacatacgacaagggccaaacctgggcccttcta
ccggccccgaccacggatgtgttgggaaacaacctccactgcgtactgccattttgttca
ctgcatctgcatctggagatgtcagagaacccctacacatctggacgcatctccagcaaa
gactcggtgcccgggatcgtgattgctacaggaaatatcggaacggagctgtcctccacc
aaccttgggatgtttataacatctgatgcggccaatacctggagacagatcttcgaggag
gagcacagcgtttggttcctggacaatggcggtgctttgctggccgttctccactccaac
acccccctccgccacttatggatcagtctagatgaagggaagaaatggactcggcacagc
ttctccctggcgcctctgtatgtggacggcgtgatgatggagccagaagctgagaaccac
atcatcacgttttttggacacttcagccaccgatcggagtggcagctgatcaagatcgac
tacaagggcatcttcagccggcgctgtatggacggtgattaccagacatggcacttacac
aacaaggccgagccgtgtgtgatgggggagaagcaggtgtacatgaagcggcggcctggt
aaccgctgcatgctgacccaggactactccaggatctactcctctgagccctgcccctgc
agatcctacgactttgagtgcgattatggcttcgaccgccaatcggacgggaaatgttcc
cctgccttctggtttaatcccaacaccaccactaagagctgcagcaccagccagagcttc
ctcaacagcaccgggtatcgaaaggttttgtccaataactgcaaggagggagggaggagc
gtgttctcccccaggaggcaggcctgtcagcccagccccccccggggcctgcgcctgtcc
accagccagggggagctggctgcgcccgccgggaccaacgtcaccttcctggtgcggctg
gaccagggggattctcagaagacccacatccagctgcactttggggacggcattaagatc
acatactccaacctgagccgcaccagcgacggcatcaagcacgtctacagcgccaccggg
atctacagggtgaccgcgctcgccgagaacagccaggggtccgacagcagcacgctgttc
ctacacatcaccagtccagtggagcgtgttcacctctcagcccccatggtggtgagcagg
cagagggaggtcaacctgaccgccgtggtgtggcccagccactccagaacactcaccttc
ttctggtggttcgacaacagctccgagccccggataaccttggagggaacagtgtcgcac
accttccagagcgaggggaccagtaaggtgacagtgcagctgtcctccgggggagtcgtc
atccaggactcaaaacgtataaccgtcaaagagctcttcaagtcactgctgctgtcgttc
tcgccggcgctcgacgaccacaacccggacatcggagagtggagggctgacgtggggcgg
gtggtccggagggccctggctcaggcgtccggcttcccagcggaccggctcctggtgtcg
ctgtaccctggcctcccgactgtaggggagctgttcattctgcctgacacgcacacgcag
tctgagcacaagaagagcacacaggaagcgctggagagggtgtctgacacgttcatcaac
gtcctgaaccaaggcttgatccagtttgagctgaagcctgaagtacgcatcattgtgtac
atgacgcaacaaacactggcgcctcatgtggatccggggtccatccacagtgggcccgcc
ctgctcatgctgctgtcggtggtgtccgtgggcctcgcagcgttcttcatctacaagttt
aaaaggaaaatcccctggattcacgtgcaggccgaagacagccaggagaaggacccggaa
gtgatcagcacggtgggtcagaacgacagcatgtcaaaggtcaagctcagcgagttcccc
tcccagaaggacctcctggagaaagaactggagataaggagcagaggaggaatgggaaga
aacatggagagagtaatcacaagggagtttccgaactgcactaacgtctga
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