Gadus morhua (Atlantic cod): 115560469
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Entry
115560469 CDS
T10832
Symbol
smurf2
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04120
Ubiquitin mediated proteolysis
gmh04137
Mitophagy - animal
gmh04144
Endocytosis
gmh04340
Hedgehog signaling pathway
gmh04350
TGF-beta signaling pathway
gmh04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115560469 (smurf2)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
115560469 (smurf2)
04350 TGF-beta signaling pathway
115560469 (smurf2)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115560469 (smurf2)
04137 Mitophagy - animal
115560469 (smurf2)
09144 Cellular community - eukaryotes
04520 Adherens junction
115560469 (smurf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmh04131
]
115560469 (smurf2)
04121 Ubiquitin system [BR:
gmh04121
]
115560469 (smurf2)
03029 Mitochondrial biogenesis [BR:
gmh03029
]
115560469 (smurf2)
Enzymes [BR:
gmh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
115560469 (smurf2)
Membrane trafficking [BR:
gmh04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
115560469 (smurf2)
Autophagy
Mitophagy
Other mitophagy associated proteins
115560469 (smurf2)
Ubiquitin system [BR:
gmh04121
]
Ubiquitin ligases (E3)
HECT type E3
115560469 (smurf2)
Mitochondrial biogenesis [BR:
gmh03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
115560469 (smurf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
zf-Vps39_C
Motif
Other DBs
NCBI-GeneID:
115560469
NCBI-ProteinID:
XP_030235767
Ensembl:
ENSGMOG00000010749
LinkDB
All DBs
Position
2:21172713..21219586
Genome browser
AA seq
787 aa
AA seq
DB search
MYPRWLSNEVSSSVSQVVPSHVCVLCAKNLVKKDFFRLPDPFSKVVVDGSGQCHSTDTVR
NTLDPKWNQHYDLYIGKADSITISVWNHKKIHKKQGAGFLGCVRLLSNAINRLKDTGYQR
LDLNKLSPSDSDTVRGQIVVSLQSRDRIGSGGPVVDCSQLFDNDLPDGWEERRTASGRIQ
YLNHITRTTQWERPTRPASEYSSPGRPLSCIVDENTPISANGATPTAVAPPTEQRAQERR
VRSQRHRNYMSRTHLHAPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNVN
CEELGPLPPGWEIRNTATGRVYFVDHNNRTTQFTDPRLSANLHLVLNPEPCPSPNGSRGS
IETQNISRHSALKELPPTPPALLSPSLLPAPSLLPLEEAECLTVPRYKRDLVHKLKILRQ
ELGHQQPQGGHCRIEVSREEIFEESYRQVMKMRPKDLWKRLMVKFRGEEGLDYGGVAREW
LYLLSHEMLNPYYGLFQYSRDDIYTLQINPDSAVNPEHLSYFHFVGRIMGVAVFHGHYID
GGFTLPFYKQLLGKPITLEDMEAVDPDLHNSLIWILDNDITGVLDHTFCVEHSAYGEIIQ
HELKPNGKNVAVSQDTKKEYVRLYVNWRFLRGIEAQFLALQKGFNEVIPQHLLKAFDEKE
LELIVCGLGKIDIVDWRSNTRLKHCTPDSNVVKWFWKAVESYDEERRARLLQFVTGSSRV
PLQGFKALQGAAGPRLFTLHQIDASSNNLPKAHTCFNRIDIPAYEMYEKLYDKLLTAIEE
TCGFAVE
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgtatcccagatggctgagtaatgaagtgtcttcctctgtaagccaagttgttcccagc
catgtttgtgtgctctgcgccaaaaacctggtgaagaaggacttcttccgtctcccggac
cccttctccaaggtggtggtggatgggtcgggccagtgccactccaccgacaccgtcagg
aacaccctggaccccaaatggaaccagcactatgacctgtacatcggtaaggcggactcc
atcaccattagtgtgtggaaccacaagaagatccacaagaagcagggggcgggcttcctg
ggctgcgtgcggctgctgtccaacgccatcaaccgcctcaaggacacgggctaccagagg
ctggacctgaacaagctgagccccagcgacagtgacacggtgcggggacagatagtggtg
agcctccagtcccgagacaggattggcagcggggggccggtggtggactgcagccagctg
tttgacaacgacctgccagacggctgggaggagaggaggacggcgtccgggcggatccag
tacctgaaccacatcacacggaccacccagtgggagcgccccaccaggccggcctcagag
tactccagcccgggccggcccctcagctgcatcgtggacgagaacacgcccatcagcgcc
aacggggccacgcccaccgccgtggcgccgcccacagagcagcgcgcccaggagaggcga
gtccggtcgcagcgccaccgcaactacatgagcaggacccacctgcacgccccccccgac
ctgcccgagggatacgagcagcggaccacgcagcagggacaggtgtacttcctccacacg
cagacaggggtcagcacctggcacgacccccgggtccccagggacctgagtaacgtgaac
tgtgaggagttgggtccgctgccccctggctgggagatccggaacacggccacggggcgg
gtctactttgtggaccacaacaaccgaaccactcagttcaccgacccgcgcctctccgcc
aacctgcacctcgttctcaacccggagccctgtccaagtcccaacggatcccgagggagc
atcgagacccagaacatcagccgtcacagcgcgctgaaggagctgccccccaccccccca
gcgctgctgtcccccagcctgctgccggcccccagcctgctgcccctggaggaggccgag
tgcctcacggtgccgcgctacaagagggacctcgtccacaagctgaagatcctgagacag
gagctgggccaccagcagccgcagggcgggcactgccgcatcgaggtgtcccgggaggag
atctttgaggagtcataccggcaggtgatgaagatgaggccgaaggacctgtggaagagg
ctgatggtgaagttccgcggggaggaggggcttgactatggaggcgtggccagggagtgg
ctgtacctgctgtcccatgagatgctgaacccgtactacggcctgttccagtactccaga
gacgacatctacacactgcagatcaacccagactctgctgtcaacccggagcacctgtcg
tacttccacttcgtggggcgcatcatgggcgtggcagtgttccacggccactacatcgat
ggcggctttacgctgcccttctacaagcagctgctggggaagcccatcaccctggaggac
atggaggctgtggaccccgacctgcacaatagcctcatctggatcctggacaacgacatc
acgggcgtgctggaccacaccttctgcgtggagcacagcgcgtacggcgagatcatccag
cacgagctgaagcccaacggcaagaacgtggcagtcagccaggacaccaagaaggagtat
gttcgtctctacgttaactggcgcttcctgcgcggcatcgaggcgcagttcctggcactg
cagaagggcttcaacgaggtcatcccccagcatctcctcaaggccttcgacgagaaggag
ctggagctcatcgtgtgcggcctgggaaagatcgacatcgtggactggaggtccaacacg
cggctgaagcactgcacccccgacagcaacgtggtgaagtggttctggaaggcggtggag
tcgtacgacgaggagcgccgcgcccgcctgctgcagttcgtcaccggctcctccagggtc
cccctgcaggggttcaaggctctccagggtgctgctggaccacgcctcttcacgctgcac
cagatcgacgccagcagcaacaatctgcccaaggcccacacctgcttcaaccgcatcgac
atcccggcctatgagatgtacgagaagctgtacgacaagctgctgaccgccatcgaggag
acctgtggcttcgctgtggagtga
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