Gadus morhua (Atlantic cod): 115560674
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Entry
115560674 CDS
T10832
Symbol
dnaaf1
Name
(RefSeq) dynein assembly factor 1, axonemal
KO
K19750
dynein axonemal assembly factor 1
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gmh03037
]
115560674 (dnaaf1)
04812 Cytoskeleton proteins [BR:
gmh04812
]
115560674 (dnaaf1)
Cilium and associated proteins [BR:
gmh03037
]
Motile cilia and associated proteins
Dynein assembly factors
115560674 (dnaaf1)
Cytoskeleton proteins [BR:
gmh04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
Dynein-related proteins
115560674 (dnaaf1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_9
LRR_4
LRR_8
LRR_14
Motif
Other DBs
NCBI-GeneID:
115560674
NCBI-ProteinID:
XP_030236008
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Position
16:3513211..3515681
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AA seq
643 aa
AA seq
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MYPAEIHERTINDMDINGIETGDANTLDSSIQNQHNDANDQTTSASSHLDEQQKYTGPRM
TKKFLRDHCKQNKLYVTPYLNDTLYLHFKGFSTIENLEEYTGLKCLWLESNGLRQIANLE
AQTELRSLFLHQNLIYKLENLGSLEKLCTLNVSNNYIQTIENIACLPELGSLQIAHNKLE
TMGDIEHLRGCLSISVLDMSHNLLSDPEILAVLESMPRLHVLNLMGNNVVKKIENYRRTL
IVRLRLLTYLDDRPVFPKDRACAEAWAVGGLDAEHKEREMWETRERRKIQDSLDAIATIR
DKAIERRRLREMQEKGQAEGTPKVESQSSCEEHETIMACSSHGKKIEAFVEGSLEAHEEF
LQSQREPVKLADDQKLCKDLEAEQPEEGLMIEKQEDDYCSPKEMRNNIEEELESEDSPES
SEMDDEERVSESDEDVRDEPDIGIDEPQRTHLEEKPTEPGHETEEHRRAHGHWKQPDPLP
PMAPSDPEDTALTMTSGGPGPLVTDLEDGEPLETLHLQLHRALCIDDLPDLEDMDTEDKD
ITGFLAFQEGTRPKIQIISGDDDDDLTQYQCEAAAAFEASPSPALLFKKSDHNTLIDDYK
KGVAMVGPGAEDDSMPVIFKSLEGSTPNQNSNSPPTRLIEELD
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgtatccagccgagatccatgaaaggacgataaacgatatggatataaacgggattgaa
acgggagatgccaatacattggactcctctattcaaaaccaacataacgatgcaaatgat
caaacaacttcagcctcatcacatctggacgaacaacagaaatatactggaccaagaatg
accaagaagtttttaagggatcactgcaagcaaaacaagctttatgtcacaccttacctg
aatgacacgttgtacttgcattttaaaggtttttccaccatagagaatttggaagagtat
acaggactaaagtgcctctggctggagagcaatggactgcgacaaattgcgaaccttgag
gcacagactgagctccgcagcttgttcctgcatcagaaccttatctacaagctggaaaac
cttggatcccttgagaaactctgcacactcaatgtctccaacaactacatccagactata
gagaatatcgcctgtttgccagagctgggctcacttcagatagcccataataagctggaa
acgatgggggacatagagcacctgagagggtgtctttcaatcagcgttctggacatgtcc
cacaacttgctaagtgacccagagatccttgctgtgcttgagagcatgccacgattgcat
gtgttaaacctgatggggaacaatgtggtgaagaaaatcgaaaattacagaaggaccctg
attgtgcgtctcagactactcacttaccttgacgaccggccggtgttccccaaagacagg
gcgtgtgcagaggcgtgggcagtcggggggctagacgccgagcacaaagaaagggagatg
tgggaaacacgagagcgaaggaagatacaggatagcttggatgccatcgcaaccatccgg
gacaaggccattgagagacgtcgcctcagagagatgcaggagaaaggtcaggctgagggt
accccgaaggtggaatctcagagctcctgtgaggagcatgagacaataatggcttgctcc
tcacacggaaagaagattgaggcctttgtggagggcagtctggaagcccacgaggaattc
ctacagagccagagagaaccagtcaagctggcggatgatcaaaagttatgcaaagatctt
gaggctgaacaacccgaagaaggtttgatgatagaaaagcaagaagacgattactgcagc
ccaaaggagatgaggaacaatattgaggaggaactagagagtgaggatagcccagagagt
tcagaaatggatgatgaagagagagtgagtgagtcagatgaagatgtaagagatgaaccc
gatattgggatagacgagccccagaggacccatttggaagaaaagccaacagagcctggc
catgaaacggaggaacatcggagagcgcacgggcactggaagcagcctgatcctctgccc
ccgatggctccctctgatccagaagacacggcactgacgatgacctccggtggtcccggg
cctctggtgacagacctggaggatggggagcctcttgagacccttcaccttcagttacac
cgggcgctgtgcattgatgacttgcctgatctggaggatatggacaccgaagacaaggac
atcacaggcttcctcgccttccaggaaggaaccagaccaaaaatacaaattatatcaggt
gatgatgatgatgatttgacacaatatcaatgtgaggcggctgcggcttttgaggcatca
ccaagcccagccttgttgttcaaaaagagtgatcacaacacattgattgatgactacaag
aagggtgttgccatggtgggtccaggagctgaggatgattctatgccagtgatattcaaa
tcacttgaagggtccactccaaaccaaaattccaacagtccacccacccgtttgattgag
gaacttgattga
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